Suncus etruscus (white-toothed pygmy shrew): 126017267
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Entry
126017267 CDS
T09902
Symbol
SOGA1
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126017267 (SOGA1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
126017267 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
126017267
NCBI-ProteinID:
XP_049635068
LinkDB
All DBs
Position
9:15925795..16003877
Genome browser
AA seq
1429 aa
AA seq
DB search
MLEMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRG
LEQDVKVSKDISVRLHKELEVVEKKRARLEEENEELRQRLIEIELAKQVLQTELERPREH
SLKKRGTRSLGKTDKKPSVQEDSADLKCQLHFAKEESALMCKKLTKLAKENDGMKEELLK
YRSLYGDLDSALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEM
DDMKDQPGASLGGLEARLAFSTLATTGGGGGGGGSECGESLAELRRHLQFVEEEAELLRR
SSAELEDQNKLLLTELAKYRAEHELDVTLSEDSCSVLSEPSQEELAAAKLQIGELSGKVK
KLQYENRVLLSNLQRCDLASCQSTRPMLETDAEAGDSAQCVPAALGDASGSHAARLCRSR
EAEALPVLREQAALVSKAIDVLLADANGFSTGLRPYLDECADFRLHEPPDNSEGPRDSKL
LHALLVRLSLLQQELNAFVRKADPILGGSAKEPPESFSTLPPLGSQGPSKEMLLAKDLSS
DFQPPDFRDLTEWEPRMREAFRAGDLESKPDPSRSFRPYRAEDNESYSSEIKELQLVLAE
AHDSLRGLQEQLSQERQLRKEEADSFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQK
FWSQEKNMLVQESQQFKHNFLLLFMKLRWFLKRWRQGKILPSERDDFLEVSSMKELYLLM
EEEELNAQHSDNKTCTGDSWTQNTPNEYIKTLADMKVTLKELCWLLRDERQGLTELQQQF
AKAKATWEMERAELKSHTAQMELKAGKGPGERAGPDWKAALQREREEQQHLLAESYSAVM
ELTRQLQISEHNWSQEKLQLVERLQGEKQQVEQQVKELQNRLSQLQKAADPWALKHTDLE
KQDNSWKEVHNEKVHDKEAASDTELGGAILKRTKSVSSMSEFESLLDCSPYLPGEAPRGK
KLPNSPTYAFVGNQLVDPEKEAAEQPGCSPRDCHRAGCQEPAGRQMQRSYTAPDKTGIRV
YYSPPVARRLGVPVVHNREGKIIIEPGFLFTTAKPKESAEANGLAESSYSRWLCNFSRQR
LDANSGSSPSASAPGFPAALHDFEISGNMSDDMKEITNCVRQAMRSGSLERKVKSTSSQT
VGLASVGTQTIRTVSVGLQTDPPRSGLHGKSWSPRSSSLMSVRSKQISSSLDKVHSRIER
PCCSPKYGSPKLQRRSVSKLDSTKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGL
SSLFSVVEHSGSTESVWKLGMSEARAKPEPPKYGLVQEFFRNVCGRAPSPTSAGEEGTKK
AEPLSPASYHQPESVARILNKKVVKCGSSEEARLAGLPQVGKDGVPRDADSSTILPNEDA
ICDCSAQSLASCFARPSRSAVVRHSPSKCRLHASESGWCGEERAAPPSD
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgctggagatgcgggacgtctacatggaggaggatgtataccagctgcaggagctgagg
cagcagctggaccaggccagcaagacctgccggatcttacagtaccggctgcgcaaggcg
gagcgccgcagtctccgcgccgcgcagacgggccaggtggacggcgagctcatccgtggc
ctggagcaggatgtcaaggtctctaaggacatctccgtgcgactgcacaaggagctggag
gtggtggagaagaaacgtgcgcggctggaggaggaaaatgaggagcttcgccagcggctc
attgagatagaactggcaaagcaggtgttgcagacggagctggagcggccgagagagcac
tccttgaagaagagagggacccgctcgctggggaagacagacaagaagccttctgtgcag
gaggacagcgcagacctgaagtgtcagctgcactttgcaaaggaggagtcggccctcatg
tgtaagaagctcaccaagctggcaaaggagaacgacggcatgaaggaggagctgcttaag
taccgctcactctacggcgacctggacagcgccctgtcggccgaggagctggcagacgcc
ccacactctcgggagaccgagttgaaggtgcatctgaagctggtggaggaggaagccaac
ctgctgagccgccgcatcgtggagctggaggtggaaaaccgaggcctgcgggccgagatg
gacgacatgaaggaccagcctggagccagcctcgggggtctggaggcccgcctggccttt
tccaccctggccaccaccggcggtggtggtggtggtggcggcagtgagtgtggggagagc
ttggccgagctgcggcgtcacctccagtttgtggaggaggaggcagagctgctgaggcgc
tcgtctgctgaactcgaggaccagaacaagctgctgctgaccgaactggccaagtaccgc
gcagagcacgagctggacgtgaccctgtcggaggacagctgctcggtgctgagcgagcct
tcgcaggaggagctggctgctgccaagctgcagatcggcgagctcagtggcaaggtcaag
aagctgcagtacgagaaccgagtgctgctgtccaacctgcagcgctgtgacctcgcttcc
tgccagagcacccggcccatgctggagacggacgccgaggcaggggactctgcgcagtgt
gtcccggctgccctgggtgatgccagtggatcccatgccgcccggctgtgcaggagtagg
gaggctgaggctctcccagtgctgcgggagcaggccgccctggtcagcaaggccatcgac
gtgctgctggctgatgccaacggcttctccacaggcctccggccgtatctggacgagtgt
gcagatttccggctgcatgagccccctgacaacagcgaggggccccgggactccaagctc
ctccacgcactgctggtgcggttgagcctactccagcaagagctcaatgccttcgtgagg
aaggccgaccccattctgggaggctcagccaaggagccgccggagtcattttccacattg
ccccccttgggctcccaggggccctccaaggagatgcttctggccaaagacctcagctcc
gacttccagccaccagatttcagggacttgaccgaatgggagcccaggatgagagaggcc
tttcgtgctggggacctggagtccaagcctgatcccagccggagctttaggccttatcga
gctgaagacaatgaatcctactcctctgagatcaaggagttgcagctggtgttggctgag
gcccatgacagcctccgaggcctgcaagagcagctgtcccaggaacggcagcttcggaag
gaggaagctgacagcttcaatcagaaaatggtccagctgaaggaggaccagcagagggcg
ctgctgaggcgagagtttgaactgcagagtctgagcctccagcggcggctggagcaaaaa
ttctggagccaggagaaaaacatgctggtgcaggagtcgcaacagttcaagcacaatttc
ttgctgctcttcatgaagctcaggtggttcctcaagcgctggcggcagggcaagattttg
cccagcgagagggacgatttcctggaggtgagcagcatgaaggagctctacctcctcatg
gaggaagaggaactgaatgctcagcattctgataacaagacctgcacgggggacagctgg
acccagaacacgcccaatgaatacatcaagacactggccgacatgaaggtgacactgaag
gaactgtgctggctgctgcgggatgagcgccagggcctgactgagctgcagcagcagttt
gccaaggccaaggccacctgggagatggagcgggcagagctcaagagccacacagcccag
atggagttgaaggctgggaaagggcctggggagcgggcagggcccgactggaaggcggcg
ctgcagcgggagcgcgaggagcagcaacatctcctggccgaatcctacagtgccgtcatg
gagctcacgcggcagctgcagattagcgagcacaactggagccaagagaagctgcagctg
gtggagcggctgcaaggggagaagcagcaggtggaacagcaggtgaaggagctgcagaac
cgcctgagccagctgcagaaggctgctgatccctgggccctgaaacacaccgacctggag
aagcaggataacagctggaaggaggtgcacaatgagaaggtccatgacaaggaggctgcc
tctgacactgagcttgggggagccatcttaaaaaggaccaaatcggtttcctccatgtct
gagtttgaaagtttgctggactgttccccctacctgcctggtgaagccccgcggggcaag
aagctgcccaacagccctacctatgccttcgtgggcaaccagctggtggacccagaaaag
gaggctgcggagcagcctgggtgctcaccccgggactgccacagggcgggctgccaggag
ccggcagggaggcagatgcaacgcagctacacggcaccagacaagacgggcatccgtgtg
tactacagccccccggtggcccggcgcctgggcgtgcctgtggtccataaccgggaaggc
aagatcatcattgagccaggcttcctcttcaccaccgccaagcccaaagagtccgccgag
gccaatgggctcgccgagagctcctatagtcggtggctctgcaacttttcacggcagcgc
ctggacgcaaactctggcagcagcccctcggcctcagctcctggcttccctgcagccctg
catgactttgagatctcgggcaacatgagcgatgacatgaaggagattaccaactgtgtg
cgccaggccatgcgctcgggctcgctggagaggaaggtgaagagcacgtccagccagacg
gtggggctggccagcgtgggcacacagaccattcgcacggtcagcgtgggcctgcagaca
gacccgccccgcagcgggctccacggcaagagctggtcaccacgcagctcctccctgatg
tctgtgcgcagcaagcaaatctcttcctccctggacaaggtgcactcacgcatcgagcgg
ccctgctgctcacccaagtatggctcccccaagctccagcgtcgctctgtgtccaaactg
gacagcaccaaggaccgtagcctgtggaacctacaccagggcaagcagaacggctcggcc
tgggcacgctccaccaccactcgggacagccctgtgctgcggaacatcaacgacgggctc
tccagcctctttagcgtggtggagcactcagggagcacagagtctgtctggaaactgggc
atgtccgaggcccgggccaagcctgagcctcctaagtacggcctcgtgcaagagttcttc
cgtaatgtttgtgggcgagccccaagccccacctcggctggggaggagggcactaagaag
gcagagcccttgtcgcctgccagctaccatcagcctgagagtgtggctaggatcctgaac
aagaaggtggtcaagtgtggcagcagtgaggaggcccgcctggccgggctgccgcaggtg
gggaaggatggtgtcccccgggatgcagacagctccactattctccccaatgaggatgcc
atctgtgactgcagtgcccagtctctggcctcctgcttcgcaaggccttcccgctctgct
gtcgttcgccactccccttccaagtgcaggctccatgcttcagagtcaggctggtgtggg
gaggaaagggctgcgcctcccagcgactga
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