Suncus etruscus (white-toothed pygmy shrew): 126017273
Help
Entry
126017273 CDS
T09902
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126017273 (CASC3)
03015 mRNA surveillance pathway
126017273 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126017273 (CASC3)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126017273 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
126017273
NCBI-ProteinID:
XP_049635087
LinkDB
All DBs
Position
1:187432775..187459961
Genome browser
AA seq
709 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSGSGSAGGGGGGSGSGSLPSQRGGGR
AGALHLRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEVGEYSEEENSKVE
LKSEANDAANSSAKEEKGEEKSDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDE
DRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQ
ELIALYGYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERPNKSHRHLGPGGTLPPR
TFINRNAAGTGRMSTPRNYSRAGAFKEGRASFRPLETGGHHGGRSGETVKHDTNYRSRRL
EQTPVRDPSPEADAQVLGSPEKEESASEIPAPPPDIVPPAPDRPIEKKSYSRARRTRVKA
GEAVKVAEEMPPPPEGLIPAPSVSETTPPPPTKTGTWETPVDSTAGGLEQDMAQLNLTEQ
NWNPGQPSFLQPRELRGMPSHIHVGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPP
APPVHISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPL
ASPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGGLPPPPPPHLYPNT
QAPSQVYGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgagcttcgcaggacacggaggacgaagaatcgggcgct
tcgggctcggatagcggcggctctccggcgcggggcggcggcagcggcagcgggagcgcg
ggcggcggcggcggcggtagcggcagcggctctctgccttcgcagcgcggaggaggccgg
gccggggcccttcatctgcggcgggtggagagcgggggcgccaagagcgccgaggagtcg
gagtgtgagagtgaagatggcatcgaaggcgacgctgtcctctcggattatgaaagtgca
gaagactcggaaggtgaagaagtgggggagtatagtgaagaggaaaactccaaagtggaa
ctgaagtcagaagccaatgatgctgctaattcttcagcaaaggaggaaaagggagaagaa
aagtctgacaccaaaggcactgtgactggagagcggcagagtggtgatggacaggagagc
acagagcctgtggagaataaagtggggaaaaagggccccaagcatctggatgatgatgaa
gatcgcaagaacccagcctacatcccccggaaaggactcttctttgagcatgatcttcga
gggcaaactcaggaggaagaagtcagacccaagggacgtcagcgaaagctgtggaaggat
gaaggtcgatgggaacatgacaagtttcgggaagatgaacaagctccaaagtctcgacag
gagctcattgctctttatggctatgacattcgctcagcccataatcctgatgacatcaaa
cctcgaagaattcggaaacccagatttggaagtcctccacaaagagatcctaactggatt
ggtgagcgaccaaacaaatctcatcgtcacctgggtcctggaggtaccctgccaccaaga
acattcattaacaggaatgcagcgggtactggccgcatgtctactcccaggaattactct
cgagctggggctttcaaggaaggtcgtgccagtttcaggcctttggagactggtgggcat
catggtggccggtctggtgagactgtcaaacatgacactaattatcgatcacggcgcttg
gagcagactcctgtgagggatccgtctccagaagcagatgctcaagtgcttggcagcccc
gagaaagaggagtcggcctcagagattcctgctcctcctcctgacattgtgccaccagcc
ccagatagacccatcgagaagaaatcttattctcgggcaagaagaaccagagttaaagct
ggagaggcggtcaaggttgcagaggagatgcctcctccacccgaggggctaatcccagca
ccttctgtctctgaaacaactcccccaccacctacgaagacgggcacctgggagactcca
gtggattctactgcaggtggacttgagcaggacatggcacaactaaacttaacagagcag
aattggaatccgggacagccttcattcttgcaaccacgtgagcttcggggcatgcccagc
cacatacatgtgggagcaggacctccaccacagttcaaccggatggaagaaatgggtgtc
cagggtgggcgagccaaacgctactcatcccagcgccagagacctgttccagagccccct
gcccctcctgtgcatatcagcatcatggagggacattactatgatccattgcagttccag
ggaccaatctatacccatggcgacagccctgccccactgcctcctcagggcatgattgtg
cagcctgaaatgcaccttccccacccaggtttacatccccaccagacaccggcacctctg
gccagtccaggcctctaccccccaccggtgtccatgtctccaggacagccaccacctcaa
cagttgcttgctcctacttacttttctgctccgggtgtcatgaactttggtaatcccagt
tacccttatgctccagggggactgcctcccccaccaccgcctcatctatatcctaataca
caggccccatcacaggtgtatggaggagtgacctactataaccctgcccagcaacaagtg
cagccaaagccctccccaccccgcaggactccccagccagtcaccatcaagcccccaccc
cctgaggttgtaagcaggggttccagttaa
DBGET
integrated database retrieval system
