Suncus etruscus (white-toothed pygmy shrew): 126017335
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Entry
126017335 CDS
T09902
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
126017335 (RBM39)
Spliceosome [BR:
setr03041
]
Common components
Common spliceosomal components
General mRNP proteins
126017335 (RBM39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
126017335
NCBI-ProteinID:
XP_049635191
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All DBs
Position
9:17082929..17123619
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AA seq
530 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERRRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacatcgacatcgaagccatgctcgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgaagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaagaagaagcaaaagtaaggaacgaaagcgaagtcgagat
agagaacggaaaaagagtaaaagtcgtgaaaggaagagaagtagaagcaaagaaagaaga
cggagtcgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcaagaagcaaaagtccattcaggaaagacaagagtcctgtgagagaa
ccaatcgataatctaactcctgaggaaagagatgcaaggacagttttctgtatgcagctg
gcagcaagaattcgaccacgggacttggaagagtttttttctacagtaggaaaggttcga
gatgtgaggatgatttctgaccgaaattcaagacgttccaaaggaattgcttatgtggaa
tttgttgatgttagctctgtgcctctagcaataggattaactggccaacgtgttttagga
gtgccaatcattgtacaggcatcccaggccgagaaaaacagagctgcagcaatggcaaat
aatctacaaaagggaagtgctgggcctatgaggctttatgtgggctccttacattttaac
ataacagaggacatgcttcggggaatctttgagccttttggaaggattgaaagtatccaa
ctcatgatggatagtgaaactggtcgatctaagggttatggatttattacgttttctgat
tcagaatgtgccaagaaggctttggaacagcttaatggatttgaattagcaggaaggcca
atgaaagttggtcatgttactgagagaactgatgcttctagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaaccggtcgcctccagttaatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcacaacaagctctacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttctcaacagacggaagcttcagctttagctgcagctgcttctgttcaacca
cttgcaacacagtgcttccaactctctaatatgtttaaccctcaaacagaagaagaagtc
ggatgggatacagagattaaagatgatgtgattgaagaatgtaataaacacggaggagtt
attcatatttatgttgataaaaattcagctcagggcaacgtgtatgtgaaatgcccgtcc
attgctgcggccattgctgcagttaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttatcacaaccttttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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