Suncus etruscus (white-toothed pygmy shrew): 126017545
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Entry
126017545 CDS
T09902
Symbol
VSX1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126017545 (VSX1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
126017545 (VSX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
126017545
NCBI-ProteinID:
XP_049635439
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All DBs
Position
9:1109339..1115968
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AA seq
237 aa
AA seq
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MSGRAGPPSAPGRPRGFAITDLLGLAPPASPAAPRAPTPDEESPAEDRSDLKSRPTLGKR
KKRRHRTVFTAQQLDELEKAFSEAHYPDVYARETLAAKTELPEDRIQVWFQNRRAKWRQR
ERRWGGSTLMAKYGLYGAMVRHCIPLPDSVFDSMKSGLLDSCAPWLLGMHKKSTTLIRTP
SEEKLARLWGTDHFKERSSPNQVEPQRGSGEASTGKGLEDVAIDLSSSAHQESKNKQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgggccgggcccccctcggcccccgggcgcccccgcggcttcgccatcacc
gacctgctgggcctggcgcccccggcctcgcccgccgcgccccgcgccccgacgccggat
gaggagagcccagctgaagacaggagtgacctgaaatcacgccccactctaggcaagagg
aagaaacggcggcataggactgttttcacagcccaacagttggatgagctggagaaggca
ttcagtgaggcccattaccctgacgtgtatgcccgagaaacgttggctgcgaagacagag
cttcctgaagatcgaatccaggtctggtttcagaaccgacgggctaagtggcgccagcgg
gagaggcgctggggcggcagcaccctgatggccaagtacgggctctatggagctatggtg
agacactgcatcccactgccggactctgtgttcgactccatgaagagcggcctgcttgac
tcctgtgccccgtggctcctgggtatgcataaaaagtccacaaccttgataaggacacca
agcgaagaaaagttggcaagactttggggaactgaccacttcaaggagagatctagccca
aatcaggtagaaccccagagaggatctggtgaagccagcactgggaaaggcttagaagat
gtggccattgatctctccagttctgcccatcaagagagcaagaataagcagtag
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