Suncus etruscus (white-toothed pygmy shrew): 126017549
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Entry
126017549 CDS
T09902
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126017549 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126017549 (SIGLEC1)
04090 CD molecules [BR:
setr04090
]
126017549 (SIGLEC1)
04091 Lectins [BR:
setr04091
]
126017549 (SIGLEC1)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
SIGLEC family
126017549 (SIGLEC1)
CD molecules [BR:
setr04090
]
Proteins
126017549 (SIGLEC1)
Lectins [BR:
setr04091
]
I-type lectins (Siglecs)
126017549 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
Ig_5
C2-set_2
C1-set
Izumo-Ig
Ig_CD22
C2-set
Motif
Other DBs
NCBI-GeneID:
126017549
NCBI-ProteinID:
XP_049635443
LinkDB
All DBs
Position
9:7812582..7834878
Genome browser
AA seq
1752 aa
AA seq
DB search
MAVPARLLLLASAVPLGELSGLARGEGGGGPSAGPSGTPLECLVCCPGEQDGAGRGSVTS
PLYPCTGLGSWGVSSPGSVAGVQGSCLLVPCIFTFPKDVEVPSSGITAIWYYDMAGSKKM
VIHSEKPELVDAKFRGRAQLLGQVLRGTCNLLLQDLRPEDSGTYNFRFEISEGNRWTDIK
GTKVTVTVQPTVPTIASPATLLEGTQVVFNCSTPYACLKDPVRLQWQGQDPERSVISDLH
NLDPEGVSHTETLRMALSWQDHGRVLSCQLSLGKHRAQGEIHLQVQYAPKGVGVLLNPSN
QNIVPGDLVTLTCQVNNSYPAISSVQWTRDGQLLSAKGPVLQLPQVTWNDSGVYTCKAGN
AVGSSVSPPINLHVFMAEVQVSPKGIIMENQTVTLACGVPRKGTTTTEIRYNWYKNQQPL
EDAHSTTLRLHPVSRADTGFYFCEVSNAWGRERSKPVSLVVSYPPLTPVLTAFLETQGTP
VGLLHCSVTSEPQATLVLSHKGLVLASSSEMGFQSSRFSISSAPNSLRVEIRDLQPKDSG
EYQCVATNSLGNSSSTLDFHALGARVLISPATEVVEGQAVTLSCQSSLPMTPDTSFSWYR
NGVLILKSPSSSLQLPAATSTDAGSYHCRPQDGHSASEPSSAAVLTVLYAPRRPILTAQL
DPEAKVIGRRRGLLLCRVDSDPPARLRLLHGHRVMASSLPSCKGCSPRLKVTRSPNLLRV
EIMDPVLEDEGVYLCEAANDLGNSSASATFDGQATVLFITPSPTLQEGSTANLTCVVSRD
AAENPANFSWFRNGQLWTQSLLPTVTLQPVGRRDAALYACRIWAEAVSQLSAPVILSVLY
PPGPPKLSAFLDMDQGHTAVFVCTVESQPQAQLALFHGDSPLVTSLQSPLPASSRFQAKA
TANSLQLEIHELGLEDSGSYRCEATNVLGSANTSLFFQVRGAWVHVSPSPELQEGQTVVL
SCRTPMGIPAGSSYHWYRDGRLLQDSTSATLSFAAISARQAGAYHCQVQAPTSATTSLAT
PVSLHVTYAPRQLAFTTLMDTGPGRLGLLLCQVNSDPPAQLRLLQGDHLVASTLKGLEKP
ADHSPMLQVTVTLNALRLEIHNATLEDEGVYTCQASNSLGQVSASANFDAQAVSVQIWPQ
PAIQEGQPATLTCQVWTSQPTQLNYTWYQDGHQRPGTRFISLLNVTVVDAASYSCGVASP
GRAPRLSRPVALDVLYAPRNLRLTSLLESQGGPLALVQCTVDSRPPAQLAISRAGRVLAS
STAASSPNSLRLELWERGPRQEGLYRCSAHNPLGQANTSLELQLEGVQVKLAPSTTVTEG
TPVTVTCEDPAALPPTLYTWYHNGRWLQEGLETALSFPRATRAHAGAYTCQGQDAQGTRS
SRPAALHVLYAPRDAVLSSFQDSRVSPAALVQCTVDSEPPAELTLSRQGRVLATSHGAPG
EVADIGQVQAARNALRLQLHDTPFGDGDTFVCTARNPLGSISTTRQLQVEGVRVVAEPGL
DVREGTVLNLSCHLPGGPEPGANSTFSWLWNGRQLHTGPLPILGFSRVARGQAGVYQCRA
EHPAGTTTSAAVLLRVRYPPDTPTMTVFVEPERGGQGILDCRVDSEPLANLTLHLRGQLV
AASQPWGTPAQPHIRVSASPNALRVDMEALKPSDQGEYVCSASNALGSATTKAYFGTRAL
QRLRLFQWLLWGLGLLAALLLLLLVLGVCYTWRRKFSNQLSVGENSVEMTSQKEMMQLLD
PAATSSSSSLFS
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggccgtccctgcccgactcctgctcctggcatcggctgtgcctttgggtgagctgagt
ggcctggcccggggtgagggtggtggtggaccctctgctggcccttcagggacccctctt
gagtgcctggtgtgctgtccaggggagcaggacggggctgggaggggatcagtgacgagt
cccctctacccttgcacaggtctgggctcgtggggtgtgtccagcccaggctcggtggct
ggtgtgcagggctcttgcctcctggtcccctgcatcttcaccttcccgaaagatgtcgag
gtcccctcctccggcatcacggccatctggtactatgacatggcgggcagcaagaagatg
gtgattcactctgagaagcctgagttggtggatgccaagttcagaggacgggcacagctg
ctggggcaggtgttgcggggaacttgcaacctgctgctccaggacctgcggcccgaggat
tcgggcacctataacttcaggttcgagatcagcgaaggcaaccgctggacggacatcaaa
ggcaccaaggtcaccgtcacagtccagcctactgtgcccaccatcgcgtcgccagccacg
cttctagaaggcacccaggtggtcttcaactgctccacgccctacgcctgcctcaaggac
cccgtgaggctgcagtggcaaggccaagaccccgaacgctctgtcatctctgacctccat
aacctagaccccgagggggtcagtcacaccgagacactccgcatggcgctgtcctggcag
gaccatggccgggtcctgagctgtcagctctccttgggcaagcacagggcccagggcgaa
atccacctgcaagtgcaatatgcccccaagggcgtaggggttctcctcaacccctcaaat
cagaacattgtcccgggggatctggtcaccctcacctgccaagtgaacaacagctaccct
gcgatcagctccgtgcaatggaccagggatggccagttgctctcagccaaggggccagtg
ctgcagctgcctcaggtgacctggaatgattctggggtctacacctgcaaagcggggaat
gctgtgggctcttctgtctcgccccccatcaaccttcatgtcttcatggctgaggtccag
gtgagtcccaaaggcatcatcatggagaaccaaacagtgactctggcctgcggggtgccc
cgaaaggggaccactacaactgagatccgctacaactggtacaagaaccagcagcccttg
gaagatgcccacagcaccaccttacgactgcaccccgtcagccgtgccgacacaggcttc
tacttctgcgaggtgtccaacgcctggggccgggagcgctctaagccggtcagcctagtg
gtcagctacccgcctctcaccccagtcctgacggcatttctggagacgcaggggacacct
gtgggcctccttcactgctctgtgaccagtgagccccaggccacattggtgctgtcccac
aaaggcctggtcctggcttcctcctctgagatgggcttccagagctcacgcttcagcatc
tcctctgcgcccaattctctgcgtgtggagatccgggatctgcagcccaaggacagtggg
gagtatcagtgtgtggccactaactccctgggaaattcctcctccaccctggacttccat
gccctgggagctcgtgtcctcatcagcccagccacggaagtggtggaagggcaggcggtg
actttgagctgccagagtagcttgcccatgacgcctgacaccagtttctcatggtaccgg
aatggagtcctgattctcaagagccccagcagcagcctccagctcccggcggccaccagc
actgacgctggctcctaccactgccgaccccaggatggccacagtgccagcgaaccctcc
tcagctgctgtcctcactgtgctctatgccccgcgcaggcccatcctcactgcccagctg
gatcccgaggccaaagtgatcggaagacgccgagggctcctactgtgccgcgtggacagc
gacccacccgcgcggctgcggctgctccacggccaccgcgtcatggcctcttccctgccc
tcgtgcaagggctgctccccacgcctgaaggtcacccgaagccccaacctactccgcgtg
gagatcatggacccagtgctggaggacgagggtgtgtacttgtgtgaggcggccaacgac
ctgggcaactcatctgcttcggccacctttgatggccaggccactgtcttgttcatcaca
ccgagtcccacgctgcaggagggcagcacagccaatctgacatgtgtcgtgagcagagac
gctgccgagaaccctgccaacttttcctggtttcggaacgggcagctgtggactcagagc
ctcctgcctacggtgaccctgcagcctgtgggcagaagggatgcagccctctatgcctgt
cgcatctgggctgaggctgtcagccagctttctgctcctgtcatcctaagcgtgttgtac
ccccccggcccacccaagctgtcagctttcctagatatggaccagggacacacggccgtg
tttgtctgcactgtggagagtcagccccaggcccaattggctctgttccatggggacagc
cctctggtcaccagcctgcagtcaccactcccggccagtagtcgctttcaggccaaagcc
acggccaactccctgcagctagagatccatgagctgggccttgaggactcgggcagctac
cgctgtgaggccacaaatgtcttggggtcggccaatacttcgctcttcttccaagtccga
ggggcctgggtgcacgtgtccccttcgccagaactccaggaaggccagactgtggtcctg
agctgccggacacccatggggatcccagcaggaagctcatatcactggtatcgagatggc
cgcctccttcaggactccacctcggccacactcagttttgctgccatcagtgcgaggcag
gctggagcctaccactgccaagtgcaggccccaacatctgccaccaccagcctagccacg
ccagtcagcctccatgtgacctatgccccgcgccagctggcattcaccaccctgatggac
acaggcccagggcgcctgggccttctcctgtgccaagtgaacagcgaccctccggcccag
ctgcgtctgctccagggggaccatcttgtagcctccactctgaaggggctggaaaaacct
gctgaccactcccccatgcttcaagtgactgtgaccctcaatgcattgcgcctggagatc
cacaacgcgactctggaagatgagggcgtctatacctgccaggccagcaattccctgggc
caggtctcggcctcagccaacttcgatgcccaggctgtgagtgtgcagatatggccccag
ccagctatacaggagggacagccggcgaccctgacctgccaggtgtggaccagccagcca
acccagctcaactacacctggtaccaggacgggcatcagcgaccaggtacccgcttcatc
tccctgctgaacgtcacggtggtggacgctgcctcctatagctgtggagtggccagccct
ggccgggccccacgcctctccaggcctgtcgccctggacgtcctctatgccccccggaac
ctccgcctgacctctctgttggagagtcagggtgggccactggccctggtgcagtgcaca
gtggacagtcgcccacccgcccagctggccatcagccgtgctggccgtgtcctggcctcc
tccactgcagcctccagccccaactcccttcgcctggagctgtgggagcggggaccccgc
caggagggcctctacagatgttctgctcacaaccccctgggccaggccaatacatccctg
gagctgcaacttgagggtgtgcaggtgaagctggccccctcaactactgtgaccgagggg
acccctgtcacagtgacctgtgaggacccggctgccctgccacccaccctctacacctgg
tatcacaatggccgatggttgcaagaggggctcgaaactgccctctccttccccagggcc
actcgggctcacgctggtgcctacacatgccagggacaggatgcccagggcacccgaagt
tccagacccgctgccctgcatgtactctatgcgcctcgagacgccgtcctgtcctccttc
caggactccagagtcagccccgcagccctggttcagtgcacggtagacagcgagccccct
gctgagctaaccctgtcccgccaaggcagggtgctggccaccagccacggggcccctggt
gaggtggcagacataggccaagtccaggcggcccgtaatgccctgaggctgcagttgcac
gacacgcccttcggggatggggacacattcgtgtgcacggcccgaaacccactgggctcc
atcagcactaccaggcagctgcaggtggaaggtgtgcgtgtggtggcagagccagggctg
gacgtgcgggagggcacagtgctgaacctgagctgtcacttgcctggtggcccagagccc
ggggccaactccaccttctcctggctctggaatggccggcagctgcacacggggcccctg
cccatcctcggcttctcccgcgtggcccgaggccaggccggcgtgtaccaatgccgggca
gaacatccagctgggaccaccacgtctgctgccgtcctgctccgagtgcgctaccctccg
gatacgcccaccatgacggtctttgtagagcctgaacgtggaggccagggcatcctagac
tgccgagtggacagcgaacccctggccaacctcaccctccaccttcggggtcagctggtg
gccgccagccagccctggggcacccctgcccagcctcacatccgtgtctccgcgtccccc
aatgccctgagggtggacatggaggctctgaagcccagtgaccagggggagtacgtgtgc
tcagcctccaatgcactgggctccgccaccaccaaggcctactttggaaccagagctctg
cagcgcctgcgcctgttccagtggctactctggggcctggggctgctggcggctctcttg
ttgctactactggtcctgggggtctgctacacatggaggaggaaattttccaatcagctg
agtgtgggtgaaaattcggtggagatgacatctcagaaggagatgatgcagctcttggat
cccgcggcaacctcatccagttcttcactgttcagctga
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