Suncus etruscus (white-toothed pygmy shrew): 126017563
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Entry
126017563 CDS
T09902
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03082
ATP-dependent chromatin remodeling
setr04714
Thermogenesis
setr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126017563 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
126017563 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
126017563 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126017563 (SMARCD2)
03036 Chromosome and associated proteins [BR:
setr03036
]
126017563 (SMARCD2)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126017563 (SMARCD2)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126017563 (SMARCD2)
PBAF complex
126017563 (SMARCD2)
GBAF(ncBAF) complex
126017563 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
126017563
NCBI-ProteinID:
XP_049635460
LinkDB
All DBs
Position
1:complement(195059800..195068639)
Genome browser
AA seq
532 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGGAVAAALGAPPPPGGPGMLPVPALRGPGPAGGVVGPGAAAF
RPMGPAGPAAQYQRPGMSPGSRMPMAGLQVGLPAGSPFGAAAPLRPGMPPTMMDPFRKRL
LVPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRME
IQEAIKKPLTQKRKLRIYISNTFSPSKVEGDSTGAAGTPGATPAGDKVASWELRVEGKLL
DDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCT
LLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYF
RQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQ
MSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDL
KIITDVTGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgaggcgcgggcgggttcccgctgcccccgctcagccccggcggcggcggc
gccgtggccgcggccctgggggcaccgcctccgcccggggggcccgggatgctgcccgtg
ccggccttgcggggcccggggccggctggcggcgtggtgggcccgggggccgccgccttc
cgccccatgggccctgcggggcccgcggcgcagtaccagcggccgggcatgtcacctggg
agccgcatgcccatggctggtctgcaggtgggactccctgccggttccccttttggtgca
gcggctccacttcgacctggcatgccacctacaatgatggacccattccgaaaacgcctg
ctggtaccccaggcccagcccccgatgcctgcccagcgccgggggctgaagaggaggaag
atggcagacaaggttctacctcagcgtatacgggaacttgtcccagagtctcaggcgtac
atggatctcttggctttcgagaggaagctggaccagaccattgctcgaaagcggatggag
atccaggaggccatcaaaaagcctctgacgcaaaaacggaaactgcggatctatatttcc
aacacgttcagtcccagcaaggtggaaggtgacagcactggagctgcaggaacccctggg
gcaaccccagcaggggacaaggtggcttcctgggagctccgagtagagggaaaactgctg
gatgatccgagtaaacagaagaggaagttttcatccttctttaaaagcctcgtcattgag
ctagacaaggaactctatgggcccgacaatcacctggtggagtggcaccggatgccgacc
acccaggagacggatggcttccaggtgaagaggcctggagacctcaatgtgaaatgcacc
ctcctgctcatgctggatcaccagcctccacagtacaaattggatccccggttggcaaga
ctgctgggggtgcacacccaaacgagggctgccatcatgcaggccctgtggctctacatc
aaacacaaccagctacaggacggccatgagcgcgagtacatcaactgcaaccgttacttc
cgccagatcttcagttgcggccgcctccgtttctctgagatccccatgaagctggccggg
ttactgcagcatccagaccccatcgtcatcaaccatgtcattagtgtggaccccaatgac
cagaagaagacagcctgctatgacattgacgtggaggtagatgacccccttaaggctcag
atgagcaatttcctggcttctaccaccaatcagcaagagattgcctccctggatgtcaag
atccatgagaccattgagtctatcaaccagctgaagactcagagggatttcatgctcagc
tttagcacggacccccaggacttcattcaggaatggctccgttcgcagcgtagggacctc
aagatcatcactgatgtgactggtaatcctgaggaggagagacgagctgccttctaccac
caaccctgggcccaggaagctgtggggaggcatatctttgccaaggtgcagcagcgaagg
caggaactggaacaggtgctgggaattcgccttacctaa
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integrated database retrieval system
