Suncus etruscus (white-toothed pygmy shrew): 126017568
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Entry
126017568 CDS
T09902
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
126017568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126017568
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
126017568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
DUF5840
Motif
Other DBs
NCBI-GeneID:
126017568
NCBI-ProteinID:
XP_049635462
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All DBs
Position
9:11167353..11177477
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AA seq
429 aa
AA seq
DB search
MAGDSWRREKGQVPDGRRPQGEAGGPLRLRDWLVAQIESGRYAGLRWEDASKTLFRIPWK
HAAKQDYRAQQDAALFRAWAIYKGKHHEGVDKEDPATWKTRLRCALNKSTDFYEVRGSSQ
LDCAHPYKVYRIVSDGAHGPVTKEFAPLEKKDLFRCQQVAPGEVSRLARSTEQVVSTALS
CLSETIWDSCGPQVPSSTLSPVAQVGSESASEDKELHPQWVQKPRAALPPDPLADHRYQA
QDTPLPWMVSHLDDIGSPADCWLHVQLFYGAKLVSEATAYTAEGCHLCPQAATFSAESLL
GWPRRVAQIHFPEPPPSAHVLWRLLSHLERGVLLWVVPEGVFAKRLCQGRVYWHGPLAPH
RTQPNKLEREHTCQLLDTRRFLTDLRAHILDGRPEPEYKIRLCFGEEYPGPPGQPEERLI
MAHVSYLPI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgactcctggcggagagagaaaggccaggtccccgacggcaggcgaccccaa
ggggaggccgggggtcccctgcgcctccgcgactggctcgtggcgcagatcgagagcggg
cgctacgcgggtttgcgctgggaggacgcgagcaagacgcttttccgcatcccctggaag
cacgcggccaagcaggactaccgggcgcagcaggacgcggcgctcttcagggcctgggcc
atatacaagggcaaacaccatgagggcgttgacaaagaggaccccgccacttggaagacc
cggctccgctgtgccctcaacaagagcactgacttctacgaggttcgggggagcagccag
ctggactgtgcccacccttacaaggtctacaggattgtgtcggatggtgcccatgggcca
gttaccaaggagtttgctccccttgaaaaaaaggatcttttccggtgccagcaggtggcc
cctggagaagtgtccaggttggcccgtagcacagagcaggtcgtctcaactgccctcagt
tgcctcagtgagacaatctgggactcttgtggcccacaggtcccctcttccaccctctct
cctgttgcccaggttggctcggaatcagcctctgaggacaaagagctgcacccccaatgg
gtccagaagccacgagccgccctgcccccagatcctttggctgaccacagataccaagca
caggacacacctcttccttggatggtctcacacttggacgacattggcagccctgcagac
tgctggctgcacgtgcagctattctacggtgcaaagctggtgagtgaagccacggcatac
acagctgagggctgccacctgtgccctcaggctgccactttctcggcagagagcctgcta
gggtggccccggcgcgtggcacagatccacttcccagagccaccgcccagcgcacacgtg
ctatggcgcctgctgtcacacctggagcgtggtgtgctgctgtgggtggtgcccgagggt
gtctttgccaagcgactgtgccagggccgtgtatactggcatggcccacttgccccacac
cgcacacagccaaacaagctggaacgcgagcacacctgccagctgctggacacacgccgc
ttcctcacggatttgcgtgcccacatcctggatggtcgcccagaacctgaatataagatc
cgtctgtgctttggggaggaatatccaggccccccaggtcagcctgaggagcggctcatc
atggcccatgtaagttacctcccaatctag
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