Suncus etruscus (white-toothed pygmy shrew): 126017619
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Entry
126017619 CDS
T09902
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04360
Axon guidance
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126017619 (LRRC4C)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
126017619 (LRRC4C)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
126017619
NCBI-ProteinID:
XP_049635592
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All DBs
Position
9:complement(89781616..90875800)
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AA seq
640 aa
AA seq
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MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VIDWETTNVTTSLMPQSTRSTEKTFTTPVTDINNGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgctggctcttcaacttctcgtggtggctggt
ctggtgcgggctcaaacttgcccttctgtatgctcctgtagcaaccagttcagcaaggtg
atttgtgtccgcaaaaacctacgtgaggttccagatggcatctctaccaatacaaggtta
ttgaacctccatgagaaccaaatccagatcatcaaagtgaatagcttcaaacacttgagg
cacctggaaatcttacagctgagtagaaatcatatcagaaccattgaaattggagccttc
aatggtctagcgaacctcaacactctagaactctttgacaatcgtcttactaccatccca
aatggagcttttgtatatttgtctaaactgaaggagctgtggttgcgtaacaaccccatt
gaaagcatcccttcttacgcttttaacagaatcccttctctgcgccgactagacttaggg
gagttgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaatttgagg
tatttgaaccttgccatgtgcaatcttcgggaaatccctaacctcacacctctcataaaa
ctggacgagctggatctttctgggaatcacttatctgctatcagacctggttctttccaa
ggactgatgcatcttcaaaaactgtggatgatacaatcccagattcaagtgattgagcgg
aatgcctttgataaccttcaatcactagtggagatcaacctggcacacaacaatttaaca
ttactgcctcatgacctcttcacacccttgcatcacctagagcgaatacacttacatcac
aacccttggaactgtaactgtgacattctgtggctcagttggtggataaaagacatggca
ccttctaatactgcttgttgtgctcggtgtaacactcctcccaatctgaaagggaggtat
attggggagctcgaccagaattatttcacatgctatgctcctgtgattgtggaacctcct
gctgacctcaacgtcactgaaggtatggctgctgagctgaagtgcagggcttccacatcc
ctgacctctgtatcctggattactccaaatgggacagtcatgacacatggggcatacaaa
gtgcgaatagctgtgctcagcgatggcacattaaatttcacgaatgtaactgtgcaagat
acaggcatgtacacatgtatggtgagtaattctgttgggaataccactgcttcggccacc
ttgaatgttactgcagcaaccactactcccttctcttacttttcaacagtgacagtagag
actatggaaccttctcaggatgaggcaaggaccacagataataatgtgggccccactccg
gtgatcgactgggaaaccaccaatgtgaccacctctctcatgccacagagcacaaggtca
acagaaaaaacattcaccaccccagtaactgatataaacaatgggatcccaggaattgat
gaggtcatgaagaccactaaaatcatcattggctgttttgtggccatcacactcatggca
gcagtgatgctggttattttttacaagatgaggaagcagcaccatcgacaaaaccatcat
gcgccaacaaggactgttgagatcattaatgtggatgatgagattacaggagatacaccc
atggaaagtcacctgcccatgcctgctattgaacacgagcacctaaatcactataactct
tacaaatctcccttcaaccacacaacaacagttaacacaataaattcaatacacagttcg
gtgcatgaaccgttattgattcgaatgaactctaaagacaatgtacaagagactcaaatt
taa
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