Suncus etruscus (white-toothed pygmy shrew): 126017619
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Entry
126017619 CDS
T09902
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04360
Axon guidance
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126017619 (LRRC4C)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
126017619 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126017619 (LRRC4C)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
NGL family
126017619 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
126017619
NCBI-ProteinID:
XP_049635592
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All DBs
Position
9:complement(89781616..90875800)
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AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VIDWETTNVTTSLMPQSTRSTEKTFTTPVTDINNGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgctggctcttcaacttctcgtggtggctggt
ctggtgcgggctcaaacttgcccttctgtatgctcctgtagcaaccagttcagcaaggtg
atttgtgtccgcaaaaacctacgtgaggttccagatggcatctctaccaatacaaggtta
ttgaacctccatgagaaccaaatccagatcatcaaagtgaatagcttcaaacacttgagg
cacctggaaatcttacagctgagtagaaatcatatcagaaccattgaaattggagccttc
aatggtctagcgaacctcaacactctagaactctttgacaatcgtcttactaccatccca
aatggagcttttgtatatttgtctaaactgaaggagctgtggttgcgtaacaaccccatt
gaaagcatcccttcttacgcttttaacagaatcccttctctgcgccgactagacttaggg
gagttgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaatttgagg
tatttgaaccttgccatgtgcaatcttcgggaaatccctaacctcacacctctcataaaa
ctggacgagctggatctttctgggaatcacttatctgctatcagacctggttctttccaa
ggactgatgcatcttcaaaaactgtggatgatacaatcccagattcaagtgattgagcgg
aatgcctttgataaccttcaatcactagtggagatcaacctggcacacaacaatttaaca
ttactgcctcatgacctcttcacacccttgcatcacctagagcgaatacacttacatcac
aacccttggaactgtaactgtgacattctgtggctcagttggtggataaaagacatggca
ccttctaatactgcttgttgtgctcggtgtaacactcctcccaatctgaaagggaggtat
attggggagctcgaccagaattatttcacatgctatgctcctgtgattgtggaacctcct
gctgacctcaacgtcactgaaggtatggctgctgagctgaagtgcagggcttccacatcc
ctgacctctgtatcctggattactccaaatgggacagtcatgacacatggggcatacaaa
gtgcgaatagctgtgctcagcgatggcacattaaatttcacgaatgtaactgtgcaagat
acaggcatgtacacatgtatggtgagtaattctgttgggaataccactgcttcggccacc
ttgaatgttactgcagcaaccactactcccttctcttacttttcaacagtgacagtagag
actatggaaccttctcaggatgaggcaaggaccacagataataatgtgggccccactccg
gtgatcgactgggaaaccaccaatgtgaccacctctctcatgccacagagcacaaggtca
acagaaaaaacattcaccaccccagtaactgatataaacaatgggatcccaggaattgat
gaggtcatgaagaccactaaaatcatcattggctgttttgtggccatcacactcatggca
gcagtgatgctggttattttttacaagatgaggaagcagcaccatcgacaaaaccatcat
gcgccaacaaggactgttgagatcattaatgtggatgatgagattacaggagatacaccc
atggaaagtcacctgcccatgcctgctattgaacacgagcacctaaatcactataactct
tacaaatctcccttcaaccacacaacaacagttaacacaataaattcaatacacagttcg
gtgcatgaaccgttattgattcgaatgaactctaaagacaatgtacaagagactcaaatt
taa
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