Suncus etruscus (white-toothed pygmy shrew): 126017643
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Entry
126017643 CDS
T09902
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04136
Autophagy - other
setr04140
Autophagy - animal
setr04211
Longevity regulating pathway
setr05010
Alzheimer disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126017643 (ATG13)
04136 Autophagy - other
126017643 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
126017643 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126017643 (ATG13)
05014 Amyotrophic lateral sclerosis
126017643 (ATG13)
05016 Huntington disease
126017643 (ATG13)
05017 Spinocerebellar ataxia
126017643 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
126017643 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126017643 (ATG13)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126017643 (ATG13)
Membrane trafficking [BR:
setr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
126017643 (ATG13)
Atg1 complex
126017643 (ATG13)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126017643 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
126017643
NCBI-ProteinID:
XP_049635626
LinkDB
All DBs
Position
9:96282033..96336844
Genome browser
AA seq
515 aa
AA seq
DB search
METDLSSQERKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSHPCNYRAAGEDAGVTY
PSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLM
VPGKEGGIPLAPNQPAHGAQADQERLATYTPSDGVHGTATPSSSEDTETVSNSSEGRASP
HDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDADPMVNPPESPSAASP
LQGSLHSDGSSGGSGGNAQDDFVMVDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSID
IGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagactgatctcagttcccaggagagaaaggacctggacaagttcattaaatttttt
gccctcaagacggtgcaagtgattgtccaggctcgacttggtgagaagatttgtactcgt
tcatcttcatctccaactggatccgattggttcaatttagcaatcaaagacatcccagag
gttacacatgaagccaagaaggcactggcagggcagctacctgctgtcggaaggtctatg
tgtgtggagatctcactcaagacttctgagggtgactccatggagttagaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagagatcaaagtttcctacacggtgtacaacaga
ctctcactgttgctgaagtctctcctggccataaccagagtgactccggcctatagactc
tccaggaaacaagggcacgaatatgtcatactgtacagaatatatttcggggaagttcag
ctaaatggtttaggagaaggtttccagacagttcgtgttgggacagtggggacccctgtg
gggaccatcactctttcttgtgcttacagaattaacttggcgttcatgtccaccaggcag
tttgagaggacaccgcctatcatggggattatcatcgaccattttgtggaccgtccctat
ccgagctcctcgcacccctgcaattacagagctgctggcgaggatgccggagtgacctac
ccttctgtggaagattctcaagaagtgtgcaccacctctttttccacctcccctccttcc
cagctctcaagctctcgcctttcctatcagcctgctgccctgggcgttggatcagctgac
ctggcttatccagtagtgtttgctgctggcctaaatgccactcaccctcaccagctgatg
gttcccgggaaggaaggtgggattcctcttgctcccaaccagcctgcccacggtgcccag
gctgatcaggagagattggcaacctacaccccttccgacggggtccacggaaccgccacg
ccatccagcagtgaggacactgaaactgtatcaaacagcagtgagggacgggcctctccc
catgatgtcttggagaccatctttgtccgaaaagttggcgcttttgtcaacaaacccatc
aaccaggttaccctgaccagtttggacataccctttgccatgttcgctccgaagaattta
gagttggaagacgccgaccctatggtgaaccctcctgagtcccccagcgctgcgtcccct
cttcagggcagtcttcactcggacggatccagcggtggtagtggtgggaacgcgcaagac
gactttgtcatggttgactttaaaccggcattttctaaagacgatattcttccgatggac
ttggggaccttctaccgtgaatttcagaacccccctcagctgagcagcctctccattgat
atcggggcacagtccatggccgaggacttggactcactcccggagaagctggctgtgcac
gagaagaatgttcgagaatttgatgcctttgtagaaaccctgcagtaa
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integrated database retrieval system
