Suncus etruscus (white-toothed pygmy shrew): 126017936
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Entry
126017936 CDS
T09902
Symbol
GFAP
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
126017936 (GFAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126017936 (GFAP)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126017936 (GFAP)
Membrane trafficking [BR:
setr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
126017936 (GFAP)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
126017936 (GFAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
126017936
NCBI-ProteinID:
XP_049635960
LinkDB
All DBs
Position
1:complement(192040985..192048523)
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AA seq
432 aa
AA seq
DB search
MERRRVTSTARRSFVSSSETVLGGLTSGRRLGPSTRLPLARMPPPLPARVDFSLAGALNA
GFKETRASERAEMMELNDRFASYIEKVRYLEQQNKALAAELNQLRSTEPTKLADVYQAEL
RELRLRLDQLNTHNTRLEMEKDNLAQDLGTLRQKLQDETNLRLEAESNLAAYRQEADEAT
LARLDLERKLESLEEEIRFLKKIHEEEVRELQEQLARQQVHVELDVAKPDLTAALRDIRM
QYEAVASSNMHEAEEWYRSKFADLSDAAARNAELLRQAKHEANDYRRQLQATNCDLESLR
GLNESLERQMREQEERHVRETASYQEALARLEEEGQNLKDEMARHLQEYQDLLNVKLALD
MEIATYRKLLEGEESRITIPVQTFSNLQIRETSLDTKAVSEGHLKRNIVVKTVEMRDGEV
IKESTQERKDVM
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagcggagacgggtcacatccactgctcgcagatcctttgtctcctcctcagagaca
gtgctagggggcctgaccagtggccgtcgcttgggtcccagcacccgccttcccctagct
cgaatgccgcctccactcccagcccgggtggatttctccctggccggggcactcaatgct
ggcttcaaggagacgagggccagcgagcgggccgagatgatggagctcaatgaccgcttt
gccagctacatcgagaaggtgcgttacctcgagcagcagaacaaggcgctggctgctgag
ctgaaccagctgcgctccacagagcccaccaagctggccgatgtctaccaagctgagctg
cgcgagctacggctgcggctggaccaactcaatacccacaacacccggttggagatggag
aaagacaacttggcacaggacctggggaccctgagacagaagctccaagatgaaaccaac
ctgaggctggaggctgagagcaacctggcggcctatcgacaggaggcagatgaagccaca
ctggcccggctggacctggagaggaagctggagtctctggaggaggagatacggttcctg
aagaagatccatgaggaggaggtgcgggagctccaggagcagctggcccggcagcaggtc
cacgtggagctggatgtggccaagccagacctcacagcagccctgagagacatccgcatg
cagtatgaggcagtggcatccagcaacatgcacgaggcagaggagtggtacaggtccaag
tttgcagacctgagtgatgcagcggcccgcaacgctgaactgctccgccaggccaagcat
gaagccaacgactaccgacgccagctacaagccaccaattgcgacctggagtctttgcgt
ggtttgaatgagtccctggagaggcagatgcgggagcaggaggagcgccatgtgcgggag
acagccagttaccaggaggcgctggcccggctggaggaggaagggcagaacctcaaggat
gagatggcccgtcacctgcaggagtaccaggacctgctcaacgtcaagctggccctggac
atggagatcgccacctacaggaagctgctggagggcgaggagagccgcatcacaattcct
gtgcaaaccttctcgaacctgcaaatccgagagactagcctggataccaaggctgtgtca
gagggtcacctcaagaggaacatcgtggtgaagaccgtggaaatgcgggatggagaggtc
attaaggagtccacgcaggagcgcaaggatgtgatgtga
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