Suncus etruscus (white-toothed pygmy shrew): 126018055
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Entry
126018055 CDS
T09902
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04141
Protein processing in endoplasmic reticulum
setr04210
Apoptosis
setr04217
Necroptosis
setr04218
Cellular senescence
setr04382
Cornified envelope formation
setr05010
Alzheimer disease
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126018055 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
126018055 (CAPN1)
04217 Necroptosis
126018055 (CAPN1)
04218 Cellular senescence
126018055 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126018055 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126018055 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
126018055 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126018055 (CAPN1)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
126018055 (CAPN1)
Peptidases and inhibitors [BR:
setr01002
]
Cysteine peptidases
Family C2: calpain family
126018055 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
126018055
NCBI-ProteinID:
XP_049636107
LinkDB
All DBs
Position
9:109032767..109056245
Genome browser
AA seq
714 aa
AA seq
DB search
MAEELITPVYCTGVSAQVQKQRAKELGLGRHDNAIKYLGQDFEQLRAQCLQTGTLFRDDA
FPPIAQSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGGLGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPVKEGKLMFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYQIILK
ALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSVTGAKQVNYQGQMVSLIRMRNPWGE
VEWTGAWSDGSMEWNNVDPYERDQLRIKMDDGEFWMSFRDFMREFTRLEICNLTPDALKS
RSIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDPDQDYGGREDGCSF
VLALMQKHKRRERRYGRDMETIGFAVYEVPPELVGRPVHLKRDFFLANSSRARSEQFINL
REVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQIQANLPDERVLSE
EEIDENFKSLFRQLAGEDLEISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRD
GNGKLGLVEFNILWNRIRNYLAIFRQFDLDKSGSMSAYEMRMAIEAAGFKLNKKLYELII
TRYSEPDLAVDFDNFVCCLIRLETMFRFFKALDTDLDGVVTFDLFKWLQLTMFA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagctcatcaccccggtgtactgcactggggtgtcggcgcaggtacagaag
cagcgggccaaagagctgggcttgggccgtcatgacaatgccatcaagtacctgggccag
gatttcgagcagctgcgggcccagtgcctgcaaactgggaccctgttccgagacgacgcc
ttcccccccatcgcccagagtctgggcttcaaggaactgggccccaactcctccaagacc
tatggcatcaagtggaagcgccccacggagctgctctcaaacccgcaattcatcgtggac
ggagccacccgcactgacatctgccaggggggcctgggggactgctggctgctggccgcc
atcgcctccctgaccctcaacgacacgcttctacaccgcgtggtcccacatggccagagc
tttcaggatggctatgcgggcatcttccacttccagctgtggcagttcggcgagtgggtg
gacgtggtggtggatgacctgctgcctgtcaaggaagggaagctcatgttcgtgcactcg
gcccagggcaatgagttctggagcgccctactggaaaaggcctatgccaaagtgaacggc
agctacgaggccctgtcaggaggcagcacctcggagggattcgaggacttcacgggtggc
gtgacagagtggtacgagctgcgcaaggcccccagcgacctctaccagatcatcctcaag
gccctggagagaggctccttgctgggctgctccatcgatatctccagcgttctggacatg
gaggccatcaccttcaagaagctggtcaagggccacgcgtactctgtgactggagccaag
caggtgaactaccagggccagatggtgagcctgatccggatgcggaacccctggggcgag
gtggagtggacgggagcctggagcgatggctccatggagtggaacaacgtggacccctac
gagcgggaccagctccgcatcaagatggatgatggggaattctggatgtcattccgggac
ttcatgcgtgagttcacacgtctggaaatctgcaacttgacccccgatgccctcaagagt
cgcagcatccgaaagtggaacacgacgctctatgaggggacctggcggaggggcagcacc
gcggggggctgccgcaactacccagccaccttttgggtgaaccctcagttcaagatccgg
ctggaggaggtggatgaccccgaccaggactacggtggccgtgaggacggctgcagcttc
gtgctggcgctcatgcagaagcacaagaggcgagagcgccgctatggccgagacatggag
accatcggcttcgctgtctacgaggtgcctccggagctggtgggccggcccgtgcacttg
aagcgggatttcttcctggccaactcgtcacgggcgcgctccgagcagttcatcaacctt
cgggaggtgagcacccgattccgcctgccgcccggcgagtacgtggtggtgccgtccacc
ttcgagcccaacaaggagggcgacttcgtgctgcgcttcttctccgagaagagcgctggg
actcaggagctggatgaccagatccaggccaatctcccagatgagcgtgtcctctcagaa
gaggagatcgacgaaaacttcaagtccctcttccggcagctggccggggaggacctggag
atcagcgtcaaggagctgcggaccatccttaacaggatcatcagcaaacacaaagacctg
cgtaccaagggcttcagcctcgagtcctgccgaagcatggtcaacctcatggaccgtgac
ggcaatgggaaactgggcctggtggagttcaatatcctgtggaaccgcatccggaactac
ctggcgatcttccggcagtttgacctggacaagtctggcagcatgagcgcctatgagatg
cgcatggccatagaggctgcaggcttcaagctcaacaagaagctgtatgagcttatcatt
acccgctactccgagcccgacctggccgtggactttgacaactttgtgtgttgcctgatt
cggctggagaccatgttccggtttttcaaagctctggacacagatttggatggcgtagtg
acctttgacctgtttaagtggttacaactgaccatgttcgcctga
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integrated database retrieval system
