Suncus etruscus (white-toothed pygmy shrew): 126018126
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Entry
126018126 CDS
T09902
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr05014
Amyotrophic lateral sclerosis
setr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126018126 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
126018126 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126018126 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126018126 (NUP98)
03036 Chromosome and associated proteins [BR:
setr03036
]
126018126 (NUP98)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126018126 (NUP98)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126018126 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
SPEG_u2
Motif
Other DBs
NCBI-GeneID:
126018126
NCBI-ProteinID:
XP_049636205
LinkDB
All DBs
Position
9:complement(52090883..52181596)
Genome browser
AA seq
1818 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNSTGSLFGNSQTKPA
GLFGTSSFNQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSSSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGGTTGLFGSSPATSTATGL
FSSSTTNSGFSYGQNKTTGFGTSTTGFGTNPGGLFGQPNPQTTSLFSKPFGQPTSTPNTG
FSFGTTSTLGQTTTNPMGLFGGTQASQPGSLFGTATNTSTGTPFGTGTNLFGQTSTAFGA
VGSTLFGNNKLTTFGTSTTSAPSFGTANGGIFGNKPTLTLGTNTNTSNFGFGTNTGGTTL
FGNKTGPGTLGTGLSTGFGTALGAGQASLFGNNQSKIGGPLGTGAFGATGFNPATATLGS
GAQQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKK
LVLKNLNNSSLFSPVNRDSEDLSSPAEFPENGERFNFLNKPVDENHQQDGDDDSLVSRFY
TNPIAKPIPQTPESAGNKHNSSSGVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDR
EEIENNTYHMHPAGIILTKVGYYTIPSMDDLAKITNDKGECIVSDFTIGRKGYGSIYFEG
DVNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKS
PDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKA
CAKKLKTAPLPPAGQTAPFQMSLNGKPAPPPQSQSPEVEQLGRVVELDSDMIDITQEPVL
DSMLEEIIPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDMILDQRFNRLPSK
ADTSQEICSPRLPISASHSSKSRSLVGGLLQSKFTSRAFLSPSASVQESRTHRASSLKNI
PSISPWSVPPPLTSVLTVPSPAPEIQLKTVGTRRHPGLVPLEKSITYGKGKLLMDMALFM
GRSFRVGWGPNWTLANSGQHLSDSSELENQQITDSVEYGFLPNPVAVKSLTESPFKVHLE
KLSLRQKKLEEDQQLYQIPLELKLKHSTVHVDELCPLIVPNTGVAVIHDYADWVKEAAAD
LPEAQIVKHWSLTWTLCEALWGHLKELDCQLEEPSDYIQILERRRAFSRWLSQTAAPQIE
EEVSLTRKDNPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQL
VDWHQLQADSFIQDERLRIYALLAGKPVWQLSEQKQINVCSLLDWKRSLAVHLWYLLPPT
ASISRALSMYEEAFQNTSQSDSYACPPLPSYLEGSGCVIEEKQDSRPLQDVCFHLLKLYS
DRHYELNQLLEPRSITADPLDYRLSWHLWEVLRALNYKHLSEQCEGILHASYAGQLENEG
LWEWAIFVLLHINNSSMREKAVRELLTRHCQLVETPESWAKETFLTQKLCVPAEWIHEAK
AVRAHMECDRHLEALYLFKAGHWNHCHKLIIRYLASDAIINENYDYLKGFLEDLAPPERS
SLIQDWETSGLVYLDYIRIMEMLQHIQQEECSSYELEQLNTKVTSLCIRIEQIHCYNVKD
RLAQSDMAKRIANLLRVVLSLQLTTPDVASDSIPDHRQVPLRLLAPHIGRLPLPEDYALE
ELRSLTQSYLRELTVGSQ
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcatttggaacaccctttgggggtggtacaggtggctttggcacaact
tcgacattcggacagaatactggctttggcactactagtggaggagcatttggaacatct
gcatttggttctagcaacagtactggaagcctctttggaaattcacagaccaaaccagca
ggattatttggtacaagttcatttaaccagccagctacatccacaagtaccggttttggt
tttggcacatcaacaggaacatcaaatagtttatttggaactgcaagtacagggactagt
ctcttctcatcccagaacaatgcttttgcacaaaataaacccactggctttggaaacttt
ggaacaagtactagcagtggtggcctttttggaactacaaataccacttctaaccctttt
ggtagctcctctggctctctctttgggccaagcagttttacagctgcacctactggcact
acaattaaatttaatcctccaactggtacagatactatggttaaagcgggagttagcact
aacatcagtaccaagcaccaatgtattactgctatgaaagaatatgaaagcaaatcctta
gaggaacttcgtttagaggattatcaggctaatcggaaaggcccacagaaccaggtggga
gcaggtggcacaactggcttatttggatcttctccagctacttcaactgcaacaggcctc
ttcagttcttctaccactaattcaggtttttcgtatggtcagaacaaaacaacaggcttt
ggaactagtacaactggatttgggacaaatccaggtggcttatttggtcagccgaaccca
cagactaccagcctcttcagcaaaccatttggccagcccacatctaccccaaatactggt
ttttcctttggtactaccagcacactaggacagacaaccaccaatcccatgggtttattt
ggaggaacccaagcttcacaacctggaagtctttttggaacagctacaaacaccagcact
gggacaccatttggaaccggaacaaatctctttgggcagaccagtactgcatttggtgct
gttggttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagt
gctccttcatttggtacagccaatggcgggatctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggttttggcacaaatactggtggaacaactctt
tttggaaataaaacgggacctgggactctgggaactggacttagtaccggatttggaaca
gctcttggtgctggacaggcttcattgtttgggaataaccaatctaagattggagggcct
cttggtacaggagcctttggggctactggatttaatcctgcaacagcaactttgggctct
ggagcccaacaagccccagtagctttgacagatccaaatgcctctgctgcccagcaggct
gttctccaacagcacatcaatagtctgacatactcaccttttggagactctcctctgttc
cgcaatcccatgtcagacccaaagaagaaagaagagagattgaaaccaacaaatccagca
gcccagaaggctctcactacacccactcactataagctaacaccccgtcctgctaccaga
gttcgaccaaaagctttacaaaccacaggcacagccaagtcacacctttttgatggactt
gatgatgatgaaccatccttagccaacggagcattcatgcccaaaaagagcattaagaag
ttggttttgaaaaatcttaacaatagcagtctcttttcacctgttaatcgtgattcagaa
gatctctcttcgccggctgaattcccagaaaatggagagagatttaatttcctgaacaaa
cctgttgatgagaatcatcagcaggatggagatgatgattctcttgtatcacgtttttat
actaaccctattgccaaaccgatacctcaaaccccagagagtgctggaaataaacacaac
agcagtagtggtgtggatgataccatagttgcattaaatatgcgtgctgccttgcgaaat
ggactggaaggaagcagtgaagagacctcttttcatgaggagtcactgcaggatgaccga
gaagaaatagaaaataatacttaccatatgcacccagcaggtattattcttaccaaggtt
ggttactatactattccatctatggatgaccttgctaaaattactaatgataaaggagaa
tgtattgtttctgacttcaccattggtcgtaaagggtatggctcaatctattttgaagga
gatgtgaacttgacaaatctaaatttggatgatattgtacatatacgacggaaagaagtg
attgtgtacttagatgataatcagaaaccacctgtgggtgaagggctaaataggaaggct
gaagttacattggatggagtttggccaactgataaaacatctcgttgtttaataaagagc
ccagatcggcttgctgatatcaactatgagggaagattggaagcagtttcaaggaaacag
ggagctcagttcaaagagtatcgtcctgaaactggttcatgggtgtttaaggtttcccat
ttttctaagtacggccttcaggattctgatgaagaggaggaggaacggccttctaaagcc
tgtgccaagaagttgaagactgcccctttgcctcctgcaggccagactgccccattccag
atgtcccttaatggcaaaccagcaccaccaccccagagtcagagtccagaggtggaacag
ttagggagagttgtggaactggacagtgacatgatagatatcacccaggagccagttttg
gattctatgttagaagagatcatacctgaggatcaggaacctgtgtctgcctcaacacac
attgcatcttcactgggaattaatccacatgttttacagatcatgaaagcatcattgctt
gctgatgaagaggatgtagatatgatcctggatcaacgattcaatcgccttccttctaaa
gcagatacttctcaagaaatctgttctcccagacttcccatttcagcatctcactcatca
aaatcccgttccttagttggtggattactgcaatcaaaatttacaagtagagcttttctt
tcaccaagtgcctctgtgcaagaaagtcgtactcaccgagcatcatctttgaagaatatc
ccatccatatcaccctggtctgtcccgccacctctgacctctgtgttaacagtgccaagc
ccagcccccgagattcagttgaaaacagtgggcacacgcagacatccaggccttgtccct
cttgaaaaatctatcacctatggcaaaggaaaattattgatggacatggctctgtttatg
ggacgctcatttcgggttggttggggccccaactggactctcgctaatagtggccaacac
ctgagtgactcatctgaactggaaaatcaacagattactgactctgtggaatatggattt
ctgccgaatccagtagctgttaaatccctgactgagtctccattcaaggttcatttggag
aagctcagtttgagacaaaagaaactggaggaagaccagcagttataccagatacccctg
gagctcaaactaaaacatagcactgtccatgtggatgagttgtgtcctcttattgtccct
aacacaggagttgctgtcattcatgactatgcagattgggttaaggaagcagcagcagac
ttaccagaagcacagattgtgaagcactggagcttaacctggacattatgtgaagctctg
tggggccacctgaaggaacttgactgtcagctggaagagcccagtgactatattcagatt
cttgagcgaagaagagctttctcgcgctggctttctcagacagctgcacctcaaattgag
gaggaagtctccttaaccagaaaagacaatcctgtggaagctgttttcagctatctcacg
ggcaagaggatcagtgaggcctgttctctggcccagcagtcaggtgatcatcgtcttgct
cttcttttgtctcagctggttggcagtcagtcggttcgagagctgcttaccatgcagctg
gtggattggcatcagctccaggctgacagcttcattcaggatgagagactgcgcatttat
gctttgttggctggaaaaccggtttggcagctctcagagcagaagcaaatcaatgtgtgc
tctctgttggactggaaacgctccctggctgttcatctttggtatttgcttccaccaaca
gcctccatttccagagcactcagcatgtatgaagaagcttttcagaatacctctcaaagt
gacagttatgcctgccccccacttccttcatacctggagggttccggttgtgtgatagaa
gagaaacaggactcaaggccacttcaagatgtctgttttcatcttctaaaactgtacagt
gacaggcattatgaactcaatcagttgctggaacctcgaagcataacagcagacccttta
gactaccgcctaagctggcatttgtgggaggtgctccgggcgcttaactataagcatctg
tcagagcaatgtgaaggcatactgcatgccagttatgctggccaattagaaaatgaggga
ctctgggagtgggccatctttgtcctcctgcacattaacaactcaagcatgcgtgagaag
gctgttcgagagttacttactcggcactgccaactggtggaaacccccgaatcatgggct
aaagaaacttttctgacccagaagctttgtgtgcctgccgaatggattcatgaagccaaa
gctgttcgtgcacacatggaatgtgaccgacacttggaggccctctatttatttaaagcc
ggacactggaatcactgccacaaacttatcattcggtacttagcttctgatgccatcatt
aatgagaactatgactacctgaaggggtttttggaagacctggcacctccagaacgcagt
agtctaatccaagactgggaaacatctgggcttgtttatctagactatatacggattatg
gaaatgctacaacatatacaacaggaggaatgttcaagttatgagctggagcagttaaat
accaaagtgacctctctgtgcatcaggatagagcaaatccattgttacaatgtaaaggac
cgcctggctcagtcagatatggccaaacgtatagccaacctgcttcgtgtcgtactgagc
cttcagcttactacccctgatgtagcctctgattcaataccagatcatcgacaagttcct
ttgcgccttttggctccccacattggccggctccccctgcctgaagactatgccttggag
gaactacgcagcctcacacagtcctaccttcgggaactgactgttgggagccaatga
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integrated database retrieval system
