Suncus etruscus (white-toothed pygmy shrew): 126018130
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Entry
126018130 CDS
T09902
Symbol
FHIP1B
Name
(RefSeq) FHF complex subunit HOOK interacting protein 1B isoform X1
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126018130 (FHIP1B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126018130 (FHIP1B)
Membrane trafficking [BR:
setr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
126018130 (FHIP1B)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
126018130 (FHIP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
HEPN_Swt1
Motif
Other DBs
NCBI-GeneID:
126018130
NCBI-ProteinID:
XP_049636211
LinkDB
All DBs
Position
9:complement(55358178..55388357)
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AA seq
982 aa
AA seq
DB search
MERMNWLSRLASRGPGPRVPQGTSPQTPVMADPETCLMVFKNHWSQVVRILERQGPRAAD
DLSAVRNHTYQMLTLLAEDRAISSVHPTPGPLLEFALREDLLTRVLAWQLKWDELGDGVE
ERRAEQLKLFEMLVSEARQPLLRHGPVREALLTLLDACGRPVPSSPALDEGLVLLLSQLC
VCLAREPSLLEFFLQPPPEPGAAPRLLLFSRLVPFVHREGTLGQQARDALLLLMALSAGS
PTVGRYIADHSYFCPVLATGLSALYSSLPRKIEVPGDDWHCLRREDWLGVPALALFMSSL
EFCNAVIQVAHPLVQKQLVDYIHNGFLVPVMGPALHKTSVEEMIASTAYLELFLRSISEP
ALLRTFLRFLLLHRHDTHTILDTLVARIGSNSRLCMVSLSLFRTLLNLSCEDVLLQLVLR
YLVPCNHVMLSQKPAVRDVDLYGRAADKFLSLIPRCCRHSAPSPPRPEHASWARGGPSRE
EGRREDTTGPGSPSVDSSSVVTVPRPATPSRLAFFLRQQSLGGSESPTPAPRSPGLTGSP
ASSPSRRSSPAEEPGELEDNYLEYLREARCGVDHCVRACRTWSAPYDGERPPPEPSPICF
RTKKRSPLPEGDRDNVGEGEEEDLGSRGLAGAVDEGSSHLTPLQLNGVSGPWPAGSKKVR
RVPQAGAGELLEGISEGMAGLECFGQELRELEVALSNGGAGAELPLEPPLPLEEEEAYES
FTCPPEPPGPFLSSPLRTLNQLPSQPFTGPFMAVLFAKLENMLQNSVYVNFLLTGLVAQL
ACHPQPLLRSFLLNTNMVFQPSVKSLLQVLGSVKNKIETFAASQEDFPALLSKAKKYLIA
RGKLDWTEGPTAGPALRRSDPLIKSRRPSLGELLLRHAHSPTRARQAAQLVLQPGRDGTG
LGLSGSSPGTSTPVLPPRGGAPERQGEALRVKNAVYCAVIFPEFLKELAAISQAHAVTSP
FLLDTSEEASGPPISGSGPLNP
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggagagaatgaactggctgagcagactggcttcccggggaccagggcctcgtgtacct
caagggacaagtcctcagactcctgtcatggctgaccctgagacctgcctcatggtcttc
aagaatcactggtcccaggtggtgcgaatcctggaacggcaaggccctcgggcagcagat
gatctcagtgctgttcgcaaccacacttaccagatgttgacactgctggcagaggatcgt
gccatatcctcagtgcacccaacccctgggcccctgctggaatttgctctgcgtgaagat
ctgctaactcgagtgttagcctggcaacttaagtgggatgaacttggggatggggtggag
gaacggcgcgctgagcaactaaaactgtttgagatgctagtgagtgaagcacgtcagcca
ctgttgcggcatggtccagttcgtgaagctctgctgaccttgctggatgcctgtgggcgt
cctgtgcccagtagtccagcattggatgaaggcctggtgctacttctcagccagctatgt
gtgtgcctggcccgggaaccttcattactcgagtttttcctgcagccgccaccagaacct
ggagctgcccctcgtcttctccttttttctcgccttgtcccctttgtccatcgagagggt
accctgggtcaacaggcccgagatgctctactcctactcatggctctgtcagctgggagc
cccactgtcggtcgctacattgcagatcactcttacttctgcccggtgctggccacaggg
ctgagtgccctgtactcctcactgcctcgaaagattgaggttccaggagatgattggcac
tgcctacgacgggaggattggctgggagtgccagcccttgcactattcatgagttctctt
gagttctgcaatgctgtcattcaggtagctcaccctctggtgcagaagcagctggtggat
tatattcataatgggttcctagtgcctgtcatgggtcctgccctgcacaaaacttctgtg
gaggagatgatcgccagtaccgcctatctggaactttttctacggagtatctctgagcct
gccttgctccgtactttcttgcgattcctgttgttacatcggcatgacactcacaccatc
cttgacacccttgttgcacgtattggcagcaactcccggctctgcatggtctctttgagt
ctcttcaggaccttactgaacctcagctgtgaggatgttctgcttcagctggttctcagg
tatcttgtcccatgtaatcatgtgatgctaagccagaagccagcagtgcgtgatgtggac
ctgtatggacgagctgctgacaaatttctctccctaatcccacgatgttgtcggcacagt
gcccccagcccaccccgtccagagcatgcctcttgggcaagaggtgggcctagcagagaa
gaagggagaagggaggataccacgggccctggaagcccaagtgttgactcttcttctgta
gtgacagtgccccgaccagctacaccatctcgcctggccttcttcttgcgacagcagagt
ttaggtggctctgagtctccaaccccagcccctcgctcaccagggcttactggatctcca
gcctccagccctagtcgacggtccagccctgcagaggagcctggtgagctggaagacaat
tacctggagtatctgcgtgaggcacgttgtggtgtggaccactgtgtccgagcctgccgt
acctggtctgccccctatgatggcgagcgacctcctcctgagcccagccctatttgcttc
cggactaagaagcgaagccctctgcctgagggggatagggacaatgtgggggaaggagaa
gaggaagatctggggagtagggggttggctggggctgtagatgagggatccagccactta
acccctcttcagcttaatggagtatcaggaccatggcctgcagggtccaagaaggttcgc
cgggtgccacaggcgggagctggggaacttctagagggcatctctgaaggcatggcagga
ctagagtgttttggacaggagctccgggagctggaggtggcattgagcaatgggggggct
ggcgcagagctccccttagagcctccactacctcttgaggaggaggaggcctatgagagc
ttcacctgtccccctgagcccccaggccctttcctcagcagccctttgcggactctcaac
cagctgccaagccagcccttcactggccccttcatggctgtgctctttgccaaactcgag
aacatgctgcagaactccgtctatgtcaacttcctgctgacggggctggtggcccagctg
gcctgtcacccccagcccctgctccgctctttcctgctcaacaccaacatggtcttccag
cccagtgtcaagtccctgctgcaggttttgggctctgtgaagaataagattgagaccttt
gcagcctcccaggaggacttcccagcactattatccaaagccaagaagtacctcattgca
cgtggcaagctggactggaccgagggccctacagcaggacctgctctccgccgctctgat
cccctaataaagagccggagaccatccttgggagagttgctcctgcggcatgcacacagc
cctaccagggcccgacaagcagcacagctggttcttcagccaggaagagatggaacagga
cttggcctaagtgggagctcccctgggacttcaactcctgttctccctccccggggaggg
gcccctgagcgccaaggtgaggctcttcgagtcaagaacgctgtctactgtgcagtcatt
ttccctgagtttctcaaggaattggctgccatctcccaggctcatgctgtgacctcgcct
ttcttgctggatacttcagaggaggcatctggccctcccatctcaggctctgggcccctc
aatccgtaa
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