Suncus etruscus (white-toothed pygmy shrew): 126018146
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Entry
126018146 CDS
T09902
Name
(RefSeq) ubiquilin-3-like
KO
K04523
ubiquilin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04141
Protein processing in endoplasmic reticulum
setr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126018146
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126018146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126018146
03051 Proteasome [BR:
setr03051
]
126018146
Membrane trafficking [BR:
setr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
126018146
Proteasome [BR:
setr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
126018146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
YukD
UBA_7
Dsc3_N
Rad60-SLD_2
Ubiquitin_5
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
126018146
NCBI-ProteinID:
XP_049636237
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All DBs
Position
9:complement(54254817..54256784)
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AA seq
655 aa
AA seq
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MAKSGEALPQGSPAPVQDPHFIKVTVKTPKDKEDFSVTDTCTILQLKEEISQRFKAHPDQ
LVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKMQRRTLGNECSAASMSTPAPSPGSLPQS
SPIYPADGPPTFSLGVLSGLNGLGLTPGSFPDQQSSMMWQNVSVPEFVAQIIEDPFIQGL
LSNTSLMRQLVLDNPHMQQLIQNNPEIGHILNNPEIMRQTLEFLRNPSMMQEMMRSQDRA
LSNLESIPGGYNVLRTMYTDIMDPMLNAVQEQFGGNPFATITANNTSNNRQPSRTENCDP
LPNPWTSTHTDSGGRGNRQSRDQNVSEIRNRFPNILGNLGLYDYLQQLHESPHSLGTYLQ
GMASTLSSNQETSPSGNRIPPTLHSSKENESGQSHPKESVSTKVKPSYPASLRYPTESNT
HQDRNQDVAGCQSTGPSSTMPDLVSGLMGSGLRAPFVPSHASPMTGDSPGIPEHAWLPPL
IYPRSLRPTGMNRAPQLQDEMRRQLPLLLHLQAAMANPRAMHALLQIEQGLQILATEAPR
LLLWFMPCLAGLGIMAGGLDPRDVSLMPEHSPLAPASGPPPAQGSMEQSLHSSPFLQLLQ
VLTNTNTQQLQPEIHFHVQLEQLRAMGFLNPEANLQALIATGGDVDAAVEKLRQS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagtggagaggccctgccacagggcagcccagcgccagtccaggatccccac
ttcatcaaagtgacagtgaagacacccaaggacaaagaggatttctcagtgacagacact
tgcaccatcctacagctgaaggaagagatatcccagcgctttaaggctcaccctgatcag
ctggtactaatctttgctggcaaaatcctcaaagaccctgactcactggcacagtgtgga
gtgcgagatggcctcactgtccacctggtcatcaagatgcagcgtcgtaccctgggcaat
gagtgctcagctgcttcaatgtctactccagccccaagccctggatcactccctcagtct
agccccatttacccagcagatggccctcccaccttcagcttaggtgtcctctcgggcctc
aatgggttaggcctgacccctggtagtttcccagaccagcaaagttcaatgatgtggcag
aatgtgtctgtacctgagtttgtggcacagattattgaggatcctttcatccaaggtctg
ctgtccaacaccagcctcatgcgccagctagttcttgataatcctcacatgcagcaattg
attcaaaacaatccagagattgggcatattctaaacaaccctgaaatcatgcggcaaaca
ctagagtttctacgcaacccttccatgatgcaagaaatgatgaggagccaggaccgggca
ctcagtaacctggagagcattcctgggggctataatgtgcttcgtactatgtacacagat
atcatggacccaatgctgaatgcagtacaggagcagttcggtggcaatccttttgctact
atcactgctaataacaccagcaacaacagacaaccttcaaggacagagaattgtgatcct
ctccctaacccctggacttctacacatacagactcaggtggaagagggaacaggcagtca
agggaccagaatgtatctgaaattagaaataggtttcccaacattttgggtaatttaggt
ctctatgactatctccaacaattgcatgaaagcccccattccctagggacctatctgcag
gggatggcatccaccctcagctcaaaccaagaaacatcaccatcaggaaatcgaattcct
ccaactttacactcatccaaggaaaatgagtcaggccagtcacaccccaaggaatccgta
tcaaccaaggtaaaaccatcctacccagcatccctgagataccctacagagtccaatact
catcaagatagaaaccaagatgttgctgggtgtcaatccactggccctagctccactatg
cctgatcttgtctcagggttgatgggttctggccttagagcaccatttgttccttcacat
gcttcccccatgacaggcgattcccctggaatccctgagcatgcctggctgccaccatta
atttacccaagatctctgagaccaactggcatgaatcgggctccccagctgcaggatgag
atgcgtcggcaactgccactattactgcaccttcaggcagccatggcaaacccccgtgcc
atgcatgcattgttacagattgagcaaggcctgcagatcctggctactgaagcacctcgc
cttcttctctggtttatgccttgcttagcagggctgggaattatggcaggaggtctggac
cctagagatgtatctcttatgcctgagcactctcctttagctccagcatctgggcctccc
ccagcacagggctctatggagcaaagtctccattcttctcccttcctccagctgttgcag
gttttaactaataccaatacccagcaattacagcctgagatccatttccatgtgcagtta
gagcagctgcgtgccatgggctttctgaatcctgaagccaatctccaggccctcattgct
acaggaggtgatgtagatgcggctgtggagaaactgaggcagtcataa
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