Suncus etruscus (white-toothed pygmy shrew): 126018167
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Entry
126018167 CDS
T09902
Symbol
PSMC5
Name
(RefSeq) LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03050
Proteasome
setr05010
Alzheimer disease
setr05012
Parkinson disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
126018167 (PSMC5)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
126018167 (PSMC5)
09164 Neurodegenerative disease
05010 Alzheimer disease
126018167 (PSMC5)
05012 Parkinson disease
126018167 (PSMC5)
05014 Amyotrophic lateral sclerosis
126018167 (PSMC5)
05016 Huntington disease
126018167 (PSMC5)
05017 Spinocerebellar ataxia
126018167 (PSMC5)
05020 Prion disease
126018167 (PSMC5)
05022 Pathways of neurodegeneration - multiple diseases
126018167 (PSMC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
setr03051
]
126018167 (PSMC5)
Proteasome [BR:
setr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
126018167 (PSMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
NPHP3_N
AAA_33
AAA_14
Parvo_NS1
ATPase
PhoH
AAA_17
FapA
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
DUF7006
Sigma54_activat
bpMoxR
ABC_tran
RNA_helicase
DUF5906
Zeta_toxin
AAA_11
TsaE
AAA_19
HR1
Prominin
Motif
Other DBs
NCBI-GeneID:
126018167
NCBI-ProteinID:
XP_049636270
LinkDB
All DBs
Position
1:195055661..195059739
Genome browser
AA seq
406 aa
AA seq
DB search
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGXDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgacgggccggagcagatggagctggaagagggcaaggcaggcagcggcctc
cgccagtactacctgtccaagatcgaggagctgcagctgattgtgaatgataagagccag
aaccttcggaggctgcaggcacagaggaatgagcttaatgcaaaagttcgcctattgcgg
gaggagctacagctgctgcaggaacaaggctcctacgtgggtgaagtagtccgggccatg
gataagaagaaagtgctggtgaaggtccatcctgagggcaagttcgttgtggatgtggac
aagaacattgatattaatgatgtgacacccaattgccgggtggccctaagaaacgacagc
tatactctgcacaagatcctgccaaacaaggtagacccactggtatcgttgatgatggtg
gaaaaagtgccagactcaacctatgagatgattggaggactggacaagcagatcaaagaa
attaaggaggtgatcgagctgccagtcaagcaccccgagctttttgaggcactgggcatc
gctcagcccaagggagtgctgctctatggccccccgggcactggaaagacattgttggcc
cgggctgtcgctcatcatacagactgtacctttattcgtgtgtctggctctgagttggta
cagaagttcatcggggaaggagccagaatggttcgggaactgtttgtcatggcccgtgag
catgcaccatccatcattttcatggatgaaatcgactccataggctcctctcggctagag
gggggctctggangggacagtgaggtacagcgcactatgctggagctgctcaaccagcta
gacggctttgaggccaccaagaatatcaaggtgatcatggccaccaataggatcgacatc
ctggattctgcgctgctccgcccaggccgcatcgacagaaagattgagttcccacccccc
aacgaggaggctcgcctagacattctgaagattcattctcggaaaatgaatctgacccgg
ggcatcaacctgaggaaaatcgctgagctcatgccaggagcatcaggggctgaagtgaag
ggtgtgtgcacagaagcgggcatgtatgcactgcgagagcgccgagtacatgtcacccag
gaggactttgagatggccgtagccaaggtcatgcagaaggatagtgagaaaaacatgtcc
atcaagaagttatggaagtga
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