Suncus etruscus (white-toothed pygmy shrew): 126018346
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Entry
126018346 CDS
T09902
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
126018346 (DCHS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126018346 (DCHS1)
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Cadherin related
126018346 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
126018346
NCBI-ProteinID:
XP_049636452
LinkDB
All DBs
Position
9:complement(55801557..55842496)
Genome browser
AA seq
3291 aa
AA seq
DB search
MQKDTGTVPSCTGMQFSRPFPLLPLLLLLGASVPGVWGQAGSLDLQIDEEQPAGTLIGDI
SAGLPAGTVAPPMYFISAQEGSGVGTDLAIDEHTGVVRTARILDRERRDRYRFTAVTPDG
ATVEVTVRVADINDHAPAFPQAQAALQIPEHTALGTRYPLEPARDADAGRLGTQGYALSG
DGAGDTFRLETRPGPDGAPMPELVISGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVT
LLDINDHAPAFNQSRYHAEVSESLAPGSAVLQVYASDADAGANGDVTYEINRRQSDGDGP
FSIDAHTGLLRLERPLDFEQRRVHELVVQAWDGGAHPELGSAFVTVHVRDANDNQPSMTV
IFLSSDGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLV
CVARRLDREERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNVPVFDRQLYRPEPLPE
VALPGSFVVRVKARDPDQGANGQVTYSLAPGTHTHWFSIDPTSGIITTATLLDYELEPQP
QLIVVATDGGLPPLTSSATVSVALQDVNDNEPQFQRTFYNASLLEGTQPGTCFLQVTATD
ADSGTFGVLSYSLGAGLGASGSPPFRIDALTGDVCTTRTLDRDHGPSSFDFTVTAVDGGG
LKSIVYVKVFVSDENDNPPQFYPREYAASLSVQSTPGTAVLKVRARDPDQGLHGQLSYHI
LAGNSPPLFALDEHSGLLTVAWPLARRANSVVQLEIGAQDGGGLQAEPRARVNISIVPGT
PIPPVFEQLQYVFSVLEDAAPGTSVGKVQAHNPPGRLGPVTLALSDGDPRGLFSIDGVSG
LLKTLRPLDRELLGPVLELEVRAGSGIPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLP
PSTAPGTLIYTLRALDPDSGVNSRVTFTLLAGDVGTFTVDPTTGQIRLMGPLGPPGGPAY
ELEVEARDGGSPPRTSHFRLRVVVQDMGTRGLAPHFSSPTYHIDLPSGTTPGTRVLQVQA
RAPDGIPVIYHLAADGLSSPFSLETQSGWLWVRAALDQELYTLKVMAVSGSKVELGQQTG
TATVRVSILNQNDHSPRLSEEPTFLTVAENQPPGTSVGRIFATDRDPGPNGRLTYSLRHL
SEDSKAFRIHPQTGEVTTLQSLDRERQSSYQLLVQVQDGGSPSRSTTGTVHIAVLDLNDH
SPTFVQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYSLTGPGSELFSLH
SHSGELFTAAPLIRAERPHYVLTLSARDQGTPPRSSSLQLLVQVLPSIRSPETPHDPSEP
DPATPVPVVLTVTAAEGLQPGSLLGSVAPPESAAAGTLTYTLVGGADPEGTFALDAASGR
LYLARPLDFEAGPPWRALTVRAEGPGGAGARLLRVQVRVQDENEHAPTFARDPLALALPE
NPEPGAALYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGLDRETTP
ALLLLVEATDRPTNASRRRTARVSARVFVTDENDNAPVFASPSRVRLPEDQLPGPAALHV
VARDPDLGEAARVSYRLAAGGDGYFRLHSSTGALSVVRPLDREQKAEHVLTVVASDHGSP
PRSATQLLTISIADVNDEAPTFQQQEYSVLLRENSPPGTSLLTLQATDPDLGPNGHVTYG
GISGESFTLDPDTGVLTTLQALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDH
APAFGSTHLTLEVPEGQDPQILTKLRASDPDEGANGQLQYHILDGDPSGAFVLDSASGEF
GTMRPLDREVESAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYAVEVSED
APAGTVLLQLKAHDPDAGANGLVTYYLGAGAAGAFLLEPSSGELRTTTALDREQCPSYAF
SVSAVDNAAAGPLSTTVPVTITVRDVNDHAPAFPTSPLRLRLPRPGPSLSTPPLALATLR
AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRLARSPAALGPRDRVLFIVATDLGRPA
RSATGVVIVGLQGESERGPRFPRTSSEAVLRENAPPGTPIVSPKATHAGGSSGPITYSIL
SGNEKGTFSIQPSTGVITVRSAEGLDFEASPRLRLVLQAESGGTFAFSVLTLTLQDANDN
APRFLQPHYVAFLPESRPLEGSLLQVEADDLDQGPSGQISYSLAASQPARGLFHIDPTTG
TITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWELRVSE
DALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSVGRYGGRVSLTGPLDFEQHDRYHL
QLLAHDGPHQGHANLTVLVEDVNDNVPVFSQSLYQVMLVEHTPPGSAILSVSATDKDSGA
NGHISYHLASPTEGFSVDPNNGTLFTTVGAMIWGQEGPGVVDVVLEARDHGMPGRASRAT
VHVQLQDQNDHAPSFTLPNYQVAVTEDLPPGSTLLTLEATDADGSRTHAIVDYSIISGNR
GKVFQLEPRLAESGEDSGLGPRVLGCLVLLEPLDFESLTQYNLTVAAADRGQPPRSSAVP
IMITVLDVNDNPPIFSQASYHVIVPEDTPTGAELLHVEASDADPGPHGLIRFTLTSGDPL
GLFELDESSGALRLAHSLDCEVQARHQLVVQAADPTGAHFALVPVTVEVQDVNDHGPTFP
LSLLSTSLAENQPPGTLVTTLHAIDRDAGSFGKLRYSLLEAGPGPEGREAFALNSSTGEL
RARVAFDYEHTGNFQLLVGAADAGNLSASVTVSVLVTGEDEYDPIFLAPAFHFQVPEGAR
RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGVLYLRVDSRAPGSGTGSSGTG
SRTRREAPRELRLEVMARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVAASLGV
VVVLALAALVLGLVRARSRKAEAAPGPMSQAAPLASGTLQKLGREPPSPPPSEHLYHQTL
PSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAARGPDS
GIQQDADGLSDTSCEPAAPDTWYKGRKAGLLLPGAGATLYREEGPPTTATTFLGGCGLSP
APSGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTEIARLK
DEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAVTRAIFPPASHRSPISHEGSLSS
AAMSPSFSPSLSPLAARSPVVSPFGVAQGPTASALSTESGLEPPDDTELHI
NT seq
9876 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggatacaggcactgtgccttcctgcactggcatgcagttctccaggcccttc
cctctgttgccattgctgttgctgctcggtgccagtgtgcctggtgtctggggtcaggct
ggaagtttggacctgcagattgatgaggaacagccagcaggcactctgatcggggacatc
agtgcagggcttccggcaggcacggtagcacctccaatgtacttcatctctgctcaagag
ggcagcggtgtgggcacagacctggccatcgatgagcacactggagtcgtccgtacagcc
cgaatcttagaccgagagcgacgggatcgctaccgcttcactgcagtcactcctgatgga
gccacggtggaagttactgtgcgagtggctgatatcaatgaccatgctccagccttccca
caggctcaggctgccctccagatccctgaacatacggctcttggcacccgctacccactg
gagcctgctcgtgatgcagacgctggccgcctaggaacccaaggctatgccctctctggt
gatggggctggagacaccttccggctggagacacggccaggtccagatggtgcaccaatg
cccgagctggtgatttccggggagctggaccgagagaaccgctcacactacatgctgcaa
ctggaggcttatgatggtggctcaccccctcgcagagcccaggctctgctggatgtgaca
ctgctggacatcaatgatcacgcccctgctttcaatcagagccgctatcacgctgaggtg
tctgagagcctggctcctggaagtgctgttttgcaagtatatgcatctgacgctgatgct
ggtgccaatggggatgtaacttatgagatcaaccggaggcagagcgacggggatgggccc
ttctccattgatgcacacacaggactgctgcggctggagcgaccactagactttgagcaa
cggcgggtccatgagttggtggtgcaggcctgggatggtggggctcacccagagctgggc
tcagcctttgtgactgtacatgtacgagatgccaacgacaaccagccttccatgacagtc
atcttcctgagttctgatggctccccacgagtgtctgaagctgccccaccaggccagctt
gttgctcgtatctcagtgtcagacccagatgatggcgactttgcccatgtcaatgtgtct
ctggagggtggagagggccactttgccctaagcacccaggacagtgtcatctacctggtg
tgtgtggctcggcgactggatcgggaggaacgtgacgcctataacttgcgggttactgcc
acagattcaggctcacccccgctgcgggccgaggccacctttgtgcttcatgtcactgat
gtcaatgataatgtacctgtctttgaccgtcagctctacagacctgagcccctgcctgag
gtggcactgcctggcagctttgtggtgcgagtgaaggcccgagatcctgaccaaggagcc
aatgggcaggtcacttatagcctggctccaggcacccacacccactggttctccattgac
cccacctcgggcatcatcaccacagctaccttgttggactacgagttggaacctcaacca
cagctaattgtggtagccacagatgggggcttgcctcctctcacctcttctgccacagtc
agtgtagccctgcaagatgtgaatgataatgagccccagttccagaggactttctataac
gcctccctgctggaaggcacccagcctggaacctgcttcctgcaggtgacagccacagat
gcagacagtggcacatttggcgtcctatcctactccttgggtgctggactcggagcctca
gggtctcccccattccgcattgatgctctcaccggtgatgtgtgtacaacccgaactctg
gatcgagaccatgggccttcaagtttcgacttcacagtgactgctgtggatggaggaggc
ctcaagtccattgtgtatgtgaaggtgtttgtgtcagacgaaaatgacaacccacctcag
ttttatccaagagagtatgcagccagtctgagtgtccagagcacacctggcacagctgtg
ctgaaggtccgtgcccgtgaccctgatcaggggctccatgggcaactctcctaccacatc
ctggctggcaatagtccccctctctttgccttggatgaacactcagggctgctgacagta
gcctggcctttagccagacgagccaattctgtggtacagctggagattggggctcaggat
ggtggtggtctgcaggcagagcccagagccagagtcaacatcagtattgtgcctggaact
cccataccacctgtatttgagcagctgcagtacgtcttttctgtgctagaggatgcagca
ccaggcaccagtgtgggcaaggtccaggcacacaacccaccaggtcgcttggggcctgtg
actcttgctctgtcagatggggatccccgaggactcttctccatagatggggtctcaggg
ctattaaaaacacttcgccctctagaccgggagcttttgggaccagtattggagctggag
gtgcgggcaggcagtggcatacccccagcttttgcagtagcccgtgtacgtgtgctgctg
gatgatgtaaatgacaattcccctgccttcccagcacccgaagacacggtgttgctgcca
cccagcactgccccaggaaccctcatctacacacttagggctctagatcctgactcaggc
gttaatagtcgagtcacctttacactgcttgcaggggatgttgggactttcactgtggat
ccaactacaggccaaatacgacttatgggacctctaggtcccccaggcggaccagcctat
gaattggaagtggaggctagagatgggggctccccaccccgcaccagccattttcgcttg
agggtggtggtacaggatatggggactcgtggactggctccccacttcagcagccctacg
taccacatagatttgccttcaggcactacccctgggactcgggtcctgcaagtacaagct
cgagcaccagatgggatccctgttatctaccaccttgcagcagatgggctaagtagcccc
tttagcctggaaacacaaagtgggtggctgtgggtacgggcagccctggaccaggaactg
tatactctgaaggtaatggctgtgtctgggtctaaagttgagctagggcaacagacaggg
acagccaccgtcagggtcagcatcctcaaccagaatgaccacagtccccgcttatctgag
gaacccaccttcctgactgtggctgagaaccagccaccagggaccagtgtgggccgaata
tttgccactgaccgagacccaggacccaatggacgactgacctacagtctgcgacatctc
tctgaagacagcaaggccttccgcatccaccctcagactggtgaggtgaccacgctccaa
agcctcgatcgtgagcggcagagcagctaccagctcctagtgcaagtgcaggatgggggg
agcccttcccgaagtaccacaggcactgtgcacattgcagtgctagacctcaacgaccac
agccccaccttcgtgcaggcctcaggggctgctggcggtggtcttccgatccaggtgcca
gatcgggtacctccaggaaccctagtgacaacgctccaagccaaggatccggatgagggg
gagaatgggaccattctctattctctaactggacctggctcagagctcttctctctgcac
tctcactctggggagctgttcacagcggcgcccctgatcagagcagagcggccccattac
gtgctgacgctgagcgctcgcgatcaaggcacccctcctcggagctccagcctccagctg
ctggtgcaggtgctgccctccattcggtctccggagactccgcacgatccttccgagccg
gacccggcgacgccggtgcccgtggtgctgacggtgaccgccgccgaagggctgcaaccg
ggctccctgctgggctcggtggcacccccggagtcagcggcggcgggcaccctcacctac
acgctggtgggtggcgcggaccccgaaggcaccttcgcgctcgacgcggcctcgggccgc
ttgtacttggcgcggcccctggacttcgaggcgggcccgccgtggcgcgctctcacggtt
cgcgccgaggggccgggaggcgcgggcgcacggctgctgcgcgtgcaggtgcgtgtgcaa
gacgaaaacgaacacgcgcccaccttcgcccgcgacccgctggcactggcgctgcccgag
aacccagagcccggcgctgcgctctacactttccgagcctcggacgccgacggcccgggc
cccaacagcgacgtgcgctaccgcctgctgcgccaggagccgcccgtgcccgcccttcgc
ctggatgcacgcaccggggccctgagcgccccgcgaggcctggaccgggagaccactccc
gctctgctgctgctcgtagaagccaccgaccggcccaccaacgccagccgccgccgcacg
gcgcgcgtgtctgcgcgcgtctttgtcacggacgagaatgacaacgcgcccgtcttcgcc
tcgccctctcgcgtgcgcctcccggaggaccagctgcctgggcccgcggcgctgcatgtg
gtggcccgggaccccgacctgggggaggctgcgcgcgtgtcctatcgcctggcagctgga
ggcgacggctactttcgattacactccagtactggagcgctgtccgtggtgcgacctctg
gaccgtgaacagaaggctgagcatgtgctgacggtggtggcctccgaccatggctccccg
cctcgctcagccacacagctgctgactatcagtatcgccgacgtgaatgacgaggccccc
actttccagcagcaggaatacagcgtccttttgcgtgagaatagccctcctggtacttct
ctcctcactctgcaggccactgaccctgacctggggcccaatgggcatgtgacttatggg
ggcatctctggagaaagctttaccctggacccagacactggagttctcacaactcttcag
gccctggatcgggaggaacaggaggagatcaacttgacagtgtatgcccgggacaggggc
tcacccccattgttgacgcatgtcacagtacgagtggcagtggaggatgagaatgaccat
gccccagcctttgggagcacccacctcaccctagaggtacctgagggccaagaccctcaa
attcttaccaaactgcgggcctctgacccagatgaaggagcaaatgggcagctacagtac
cacatcctggatggagatccatctggagcctttgttcttgattctgcctctggagagttt
ggcaccatgaggcctttagaccgcgaggtggagtcagcattccagctgcgaatagaggcc
cgggatggaggccagccagctctcagtgccactctgcttgtgacagtgacagtgctggat
gccaatgatcatgccccagctttccctgtgcctgcctacgctgtggaggtatctgaagat
gcacctgcagggaccgtgctgctgcagttaaaggctcatgaccctgatgctggggccaat
ggtcttgtaacctactatctgggtgcaggtgctgcaggtgccttcctgctggaacccagc
tctggggaactgcgcacgaccacagccctggacagagagcagtgtcccagctatgccttt
tctgtgagcgcagtggacaatgcggctgctgggcctctgagcaccacagtgcctgtcacc
atcacagtgcgagatgtcaatgatcatgcccctgctttccccaccagtcctttgcggctg
cgcctgccccgtccaggccccagcctcagtaccccacctctggctctggctactctgcga
gctgaagaccgtgatgctggtgccaatgcatcaatcctctaccgtctggcaggcacgcca
ccacctggtaccactgtggactcttacactggtgaaattcgcttggcccgctctcctgca
gccctgggccctcgggatcgtgttctcttcattgtggccactgacctgggccgtccagct
cgctctgctactggcgtggtcattgttgggctgcaaggggagtctgaacgtggaccccgc
tttcctcggactagtagcgaagctgtgctccgtgagaatgcacccccaggcactcctatt
gtctctcccaaagccacccatgctgggggttccagtggcccaatcacctacagcattctc
agtggaaacgagaaaggaacattctctatccagcctagtactggagtcatcacagttcgc
tccgcagagggattggactttgaggcaagtccacggttgcgactagtattacaggcagaa
agtggaggcacttttgcattctccgtgctgacactcaccctgcaagatgccaatgataat
gctccccgcttcctgcagccccactatgttgccttcctgcctgagtccaggcccttggag
gggtctctgctacaggtggaggcagatgacctggatcaaggtcccagtggacagatctcc
tatagtctggctgcatcccagccagcccggggattgttccacatagacccaactacaggc
acgattaccaccacagccattctggaccgtgagatctgggctgaaacacggttagtattg
atggccacagacagaggaagtccagccctggtgggctcagctacccttacagtgatggtc
atcgataccaatgacaatcgtcccaccatcccccagccctgggagctccgagtatctgaa
gatgcactccttggctcagagattgcgcaggtaacggggaatgatgtggactctggacca
gtgttgtggtatgtgctgagcccctccggaccccaggatcccttcagtgtaggccgctat
ggaggccgtgtctcactcacaggccctttggactttgagcaacatgaccgttaccacctg
cagctattggcacatgatgggcctcaccaaggccatgccaatctcacagtgcttgtggaa
gatgtcaatgacaatgtacctgtattctctcagagtctctaccaggtgatgctggttgaa
cacacacccccaggcagcgccattctctctgtctctgccaccgacaaggactcaggggcc
aatggtcacatctcctaccacctggcctcccctactgagggcttcagtgttgaccccaac
aacggaactctattcacaacagtgggagcaatgatttggggccaggaggggccaggagtg
gtggatgtggtgctagaagcacgagatcacgggatgccaggccgggcatctcgagccaca
gtgcacgtgcagctacaagaccagaacgaccatgccccaagcttcacattgccaaactac
caggtggctgtgactgaggatctgcccccaggttctaccctgctcaccctggaggccaca
gatgctgacgggagccgtacccatgcaattgtggactacagcatcattagcggcaacagg
ggcaaagtcttccaactggaacccaggctggccgagtcaggggaagatagtggactaggt
ccccgggttctgggctgcctggtattgcttgagcctctggattttgaaagcttgacccag
tacaacctaacagtggctgcagctgatcgggggcagcctcctcgcagctcagcagtgcct
atcatgatcaccgtattagatgtcaatgacaatccacccatcttctcccaagcatcctac
catgtgatagtgcctgaggacacacccactggagctgagctgctgcatgtggaggcctca
gatgctgacccaggccctcatggtctcatacgttttacacttacctcaggtgaccctctg
gggctctttgagctggatgagagctcaggtgccctgcgactggcccattccttagattgt
gaggttcaggctcgacatcagcttgtagtgcaggcagctgaccctacaggggcacacttt
gctctagtcccagtgacagttgaggttcaggatgtgaatgatcatggcccaaccttcccc
ctgagcttgctcagcaccagcctggcagagaaccagcctccaggcactcttgtaaccaca
ctgcatgcaattgatagggatgctggttcttttgggaagcttcgttacagcctgctagag
gctggcccagggcctgagggtcgtgaggcatttgcactgaacagctcaacaggggagctg
cgggcccgagtggcctttgactatgaacacacgggaaacttccagctactggtaggtgct
gctgatgctgggaatctctcagcctcagtcactgtgtcagtgctggtgaccggagaggat
gagtatgaccccattttcctggctccagcatttcacttccaggtgccagaaggtgcccga
cgtggtcacagcctgggtcatgtgcaggccacagatgaagatggaggtgccgatggtctg
gtactctattcccttgccacctcttccccctattttggaatcaaccagactacaggtgtc
ctgtacctacgggtagacagccgggcaccaggcagtggaacaggtagctcggggactggg
agccggactcgccgtgaagcaccacgggagttgaggttagaggtgatggcacgggggcct
ctccctggctcccggagtgccacagtgcctgtgactgtggacatcacccacaccgcactg
ggcttggcacctgacctcaacctgctcttggtgggagccgtagcagcctccctaggagtt
gtagtggtacttgcactggcagccctggttcttgggctggtgagggcccgcagccgtaag
gctgaggcagcacctggcccaatgtcacaggcagcacctctggctagtggaactctgcaa
aagctgggccgagagccacccagcccaccaccctcagaacacctatatcaccagactctc
cccagctacggcgggccaggagctgggggtccctatccccggggtggctccctggaccct
tcacattcaagtggccgaggctcagcagaggctgcagaggatgacgagattcgcatgatc
aatgagtttccccgagtggcaagcgtagcctcctcgttggctgctcgtggtcccgactcg
ggcatccagcaggatgcagatggactaagtgatacatcctgtgagccagctgctcctgac
acctggtataagggccgcaaggcagggctgttgctgccaggagcaggagccactctctac
cgagaagaggggcccccaaccacagctaccaccttcctggggggctgtggcctcagccct
gcaccttctggggactatggcttcccagcagatggcaagccatgcgtggcaggtgcactg
acagccattgtggctggagaggaggagcttcgtggcagctacaactgggactacctgcta
agctggtgccctcagttccagcctctggccagcgttttcactgagattgcccgtctcaag
gatgaagcgcgtccatgtcccccggctccccgtattgatccaccacccctcatcactgcc
gtggctcacccaggagctaaatctgtgccccccaagccagccagcacagctgtcactcgg
gccatcttcccgccagcctcccaccgctcccctatcagccatgaagggtccctgtcctca
gcagccatgtcccccagcttctccccatcactgtctccgctggctgctcgttctcctgtt
gtctcaccatttggggtagcccagggccccacagcctcagcactcagcacagagtctggc
ctggagccccctgacgacacagagctacacatctag
DBGET
integrated database retrieval system
