Suncus etruscus (white-toothed pygmy shrew): 126018350
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Entry
126018350 CDS
T09902
Symbol
CLPB
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04213
Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
126018350 (CLPB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
setr03110
]
126018350 (CLPB)
Chaperones and folding catalysts [BR:
setr03110
]
Heat shock proteins
HSP100
126018350 (CLPB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank_2
Ank
Ank_5
Ank_3
ClpB_D2-small
Ank_4
AAA_5
AAA
Zeta_toxin
Sigma54_activat
AAA_22
Torsin
AAA_24
nSTAND3
bpMoxR
ANK_LRRK2
AAA_3
AAA_14
ATPase_2
ABC_tran
YchF-GTPase_C
Motif
Other DBs
NCBI-GeneID:
126018350
NCBI-ProteinID:
XP_049636458
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All DBs
Position
9:51482427..51625491
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AA seq
679 aa
AA seq
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MLGSLVLKRTTPASRFLLQLLRSSSPRSHGGVSGRRISTGDLGEAQCTRRAAVEEGCHGP
STALLTRGGESVTAGTQAGSVEIQCLAAATRKHLPSLQETLPGQDWSGVPNRAGLGVWAL
ATALVAHCYSKSPSNKDSALVEAARANNVQEVERLLSEGADVNARHKLGWTALMVASISR
NYSVVQILLAAGADPNLGDDFSSVYKTAKDQGIHSLEVLVTREDDFNNRLNNRASFKGCT
ALHYAVLADDYRTVKELLDGGANPVQRNEMGHTPLDYAREGEVMKLLRSSEIKYQEKQRK
REAEERRRFPLEQRLKEHIIGQESAIASVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKT
ELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPN
AVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQ
LRQEALEMSHNRIAENLGDMQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYF
LPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVER
RVVNQLAAAYEQDLLPGGCTLRITVEDSDKKLLKSPERTSPEAEKRLPKLRLEIVDKDSK
THKLDIQAPLHPEKVCFTL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgctggggtctctggtgttgaagagaacaacgccggcgtccaggtttcttctccagctg
cttagatcctcatcgccccggagccatggaggggtctccggccggcgtatatccaccggg
gaccttggggaggctcaatgcaccaggagggcagctgtggaggagggatgccatggacca
tctaccgccttgctcacccgaggaggagagtcagtaaccgcggggacccaggcaggaagc
gtagagatccagtgccttgcagctgccacacggaaacaccttcctagtctgcaagaaaca
ctccccggacaggactggagtggggtccccaacagagccggcctgggagtatgggcccta
gccactgcgctagtggctcactgttacagcaagagcccgtccaacaaggattcagccctg
gtggaagctgctcgtgccaacaatgttcaagaagtggagaggctgttgtcagaaggtgca
gatgtcaatgcaaggcacaaacttggctggacagcactcatggtggcatccatcagtcga
aactatagtgtggtgcagatcctgctagctgctggtgctgacccaaaccttggagatgat
ttcagcagcgtgtacaagacagctaaggatcagggaatacattctttggaagtcctcgtc
acccgagaggatgacttcaacaaccggctgaacaaccgtgccagcttcaagggctgcacg
gctctgcactatgctgtcctcgctgatgactaccgcaccgtcaaagagctgctggatgga
ggagccaatcccgtgcagaggaatgaaatgggacatacgcccttggattacgcccgtgag
ggggaggtgatgaagcttctgaggtcatctgagatcaagtaccaggagaagcaacggaag
cgagaggccgaggagcggcgccgcttccccttggagcagcggctgaaggagcacatcatc
gggcaggagagcgccattgcttcagtgggagctgcgatccggaggaaggagaatggctgg
tatgacgaagaacaccctctggtcttcctcttcttgggatcgtcaggaatagggaaaact
gagctggccaagcagacagccaaatatatgcacaaagacgccaaaaagggcttcattcgg
ctcgacatgtctgagttccaggaacgacacgaggtggccaagtttattgggtccccacca
ggctacatcggccatgaggagggcggtcagctaaccaagaagctgaagcagtgccccaat
gctgtggtgctcttcgacgaggtggacaaggctcatccagatgtgctcaccatcatgcta
cagctctttgatgagggccgactgactgatggaaagggaaagaccatcgactgcaaggat
gccatcttcatcatgacctccaatgtggccagtgacgagatcgcacagcatgcactgcag
ctgaggcaggaagctctggaaatgagccacaatcgcatcgcagagaaccttggggacatg
cagatcagtgacaagatcaccatctcaaagaacttcaaggagaatgtgattcgccccatc
ctgaaagctcacttccggagggatgagtttttaggaagaatcaatgaaatcgtctacttc
ctccccttctgccactcagaactcattcagcttgtcaataaggaactgaacttctgggcc
aagagggccaagcaaaggcacaatattactctgctgtgggaccgagaagtggcggatgtg
ttggtcgatggctacaatgtgcactatggcgcccgatccatcaagcatgaggtggagcgc
cgcgtggtgaaccaacttgcagctgcctacgagcaggacctactacctgggggctgcacg
ctgcgcatcactgtggaggactcagacaagaagctcctaaagagccctgagaggacctcg
cctgaggcggagaagcgtctcccgaagttgcgactggagatcgttgataaggatagcaag
acccacaaactggacatccaggcaccactccaccctgagaaggtgtgcttcacactctag
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