Suncus etruscus (white-toothed pygmy shrew): 126018353
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Entry
126018353 CDS
T09902
Symbol
TRIM6
Name
(RefSeq) tripartite motif-containing protein 6
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126018353 (TRIM6)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126018353 (TRIM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_3
PRY
zf-Nse
zf-RING_10
TRAF3_RING
U-box
zf-RING_6
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
126018353
NCBI-ProteinID:
XP_049636462
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All DBs
Position
9:54431471..54437996
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AA seq
487 aa
AA seq
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MTSTVLVDIQEEVTCPICLELLTEPLSIDCGHSFCQACIIANHKESVIGQEGMSSCPVCH
ISYQPENLRPNRHLANIAERLREVVLGSGKQLTANLCANHGEKLQLFCKEDGKVICWLCE
RSQEHRGHQTLLMEEVAQEYQEKFQESLKKLKQEQEEAEKLNAVIREKRESWKNQLEPEK
LRIQTEFNKLRSILDKEEQRQLKKLEDEERKGLSIIEKAEQDLVQQSQSLGELVFDLERR
CQGSTTELLQDVCDVTKRSEVWSLKKPESLPTKLKSRFRAPDLKKMLRVFRELTDVQSHW
VDVTMNPHTATINLVMAKNRRQVRYVGGELSGSPLEEYYDCSILGSQHFSSGKHYWEVDV
TKKTDWILGVCSHSTEPAVSFNQFAQSRNAYSRYQPQSGFWVIGLHHKHEYRAYEDSSTA
LLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNTCNCVVPM
TLRRPGP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaacagtgttggtggacatacaagaagaggtgacctgccccatctgcctggag
ctcctaacagaaccactgagcatagactgtggccacagcttctgccaagcctgcatcata
gcgaaccacaaggaatcagtaattggccaagaagggatgagcagctgccctgtgtgccat
atcagctaccagcccgagaacctccgccctaaccggcacctggctaacatagcagaaaga
ctcagagaggtagtgctgggctctggaaagcaactgacagcaaatctctgtgctaatcat
ggggagaaactccagctcttttgtaaagaggatgggaaggtcatttgctggctttgtgag
aggtctcaagaacaccgtggtcaccaaacattgctaatggaggaggtggcccaggagtac
caggaaaagttccaggagtctcttaagaagctgaagcaagaacaggaggaagcagagaaa
ttaaatgctgttattagagaaaagagagaatcctggaagaatcagttagaacctgagaaa
ctcaggattcagacagagtttaataagttgagaagcattctagacaaagaggagcagcga
caactgaaaaagttggaggatgaagagagaaaggggctaagtattattgaaaaggctgag
caagatctggtccagcagagccagtcactgggtgagctggtcttcgatttagagcgtcgg
tgtcaggggtccacgacagaattgctgcaggatgtgtgcgatgttacgaaaaggagtgaa
gtctggtctctgaagaaaccagaaagtctccccacaaagctgaagagtaggtttcgagcc
ccagatttgaaaaagatgttgcgagtgtttagagaattgacagatgtccagagccactgg
gtggatgtgactatgaatccacacacagctactataaatcttgtgatggccaaaaaccgg
agacaagtgaggtatgtgggtggtgaactatctggttctcctctggaagaatattatgac
tgtagtatcttgggctctcagcacttctcctcaggaaaacattactgggaggtagatgtg
accaagaagacagactggatcctgggggtatgcagtcattcaacggaacctgcagtctct
ttcaatcaatttgcacaaagtcggaatgcgtactctaggtatcaacctcaaagtggcttc
tgggtaattggattacatcataaacatgaataccgagcctatgaagactcctctacagcc
ttgcttctctccatgactgtgccccctcgtcgagttggtgtgttcttggactatgaggct
ggcactgtctcattttacaatgtcacaaaccatggctttcccatctataccttctctaaa
tattattttcctaccaccctttgcccatattttaatacatgtaactgtgtggtcccaatg
accctgcgtcgtccaggcccttaa
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