Suncus etruscus (white-toothed pygmy shrew): 126018891
Help
Entry
126018891 CDS
T09902
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126018891 (CTR9)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
126018891 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_5th
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
126018891
NCBI-ProteinID:
XP_049636948
LinkDB
All DBs
Position
9:60440104..60488321
Genome browser
AA seq
1176 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPNDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGRRSKKGGEFDEFVNDDTDDDMPISKKKKRRKGSGSEPEGEEEEGGERKKKKRR
RPTKGEEGSDDDETENGPKTKKRRPPRTEKKKAPKPERLPPSMKGKIKSKAIISSSDDSS
DEDKLKIADEGHPRHSNSNSDSDEGEQDHERRKRGDSSDSDSDENQNKSGSEAGSPRRVR
RPRSDEDSDSDQQPRKRRPSGSEQSDNESVQSGRSRSGGSENDSRPASPSAESDHDSERG
SDNEGSGRGSGNESEPEGSNNEASDRGSEHGSDDSD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctcgatcgagattcccctccgggacactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagatgaagttatcagtattctgaaacaagaacacacacaa
ctgcacatatggattgctttggcgctggaatactacaagcaaggaaaaacagaagagttt
gttaagttattggaagcagcacgtatagatggcaatttggattatagagaccatgaaaaa
gatcagatgacgtgcttggatacattggcagcctattatgtacaacaggctcgaaaggaa
aagaataaggacaataaaaaggatcttattacacaagcaactctactatatacaatggct
gataaaattattatgtatgaccagaaccatcttctgggaagagcctgcttctgtttactt
gaaggtgacaaaatggatcaggctgatgcccagtttcattttgtactcaaccagtctcca
aataatatcccagctcttcttggtaaagcttgcatttccttcaacaaaaaggattataga
ggagctcttgcttactataagaaagcattgcgtactaatccaggatgtccagctgaagtt
cgtttaggaatgggtcattgctttgtgaaacttaacaaactggagaaagctcgcctggca
ttcagcagagccctggaactcaattcgaaatgtgtgggagcattggttggattagctgtt
ctagaactcaacaataaagaggcggattccatcaaaaatggtgtccaacttctttccaga
gcctacacaattgaccccagcaaccctatggtattgaaccacttggcaaatcactttttc
ttcaaaaaggattatagtaaagttcaacatttggcgctccatgcattccataatacagaa
gtggaggccatgcaagcggaaagttgctatcagctggctagatcattccatgttcaggaa
gattatgaccaagccttccagtactactaccaagctacacagtttgcttcatcatctttt
gtgctgccattttttggtttgggacaaatgtacatttatcgaggtgacaaagaaaatgca
tcacagtgctttgagaaagttttaaaagcatatcctaataattatgaaaccatgaaaatt
cttggctctctatatgctgcttcagaagatcaggaaaaacgagatatagccaagggacat
ttgaaaaaggtcacagaacaatatcctgatgatgttgaggcttggattgaattggcacaa
atcttagagcaaacggatatacagggtgccctgtcagcctacggtacagctacacggatc
ctacaggagaaagtacaggctgatgttcccccagagattctgaataatgtgggtgctctt
cattttagacttggaaatcttggtgaggcaaagaaatactttttggcatcattggatcga
gcaaaggcagaagctgagcatgatgaacattattataatgccatttctgttacaacatca
tacaatttagccaggctctatgaagcaatgtgtgaattccacgaggcagaaaaattatat
aaaaacatcttacgagaacatcccaattacgttgactgctatctccgcctaggagccatg
gctagagataaaggaaacttttatgaggcttcagattggtttaaggaagcactgcaaatt
aatcaggaccatccagatgcttggtctttgattggtaatcttcatttggcaaaacaagaa
tggggtcctgggcaaaagaaatttgagagaattttaaaacaaccgtctacacagagtgac
acttattctatgctggctcttggcaacgtctggcttcagactttgcatcagcccactcgc
gatcgagaaaaggaaaagcgtcatcaagatcgtgctctggccatctacaaacaagtactc
agaaatgatgcaaaaaatctgtatgctgctaatggcataggagctgttttggcccacaaa
ggatatttccgtgaagctcgtgatgtatttgcccaagtcagagaagcaacagcagatatc
agtgatgtgtggttgaacctagcacacatctatgtagaacaaaagcaatatatcagtgct
gtgcaaatgtatgaaaattgcctcagaaagttctataagcatcaaaacactgaagttgtg
ctctatttggcccgagccctcttcaaatgtggcaagttgcaggaatgcaaacagactttg
ctgaaggctcgacatgtggcacccaacgatacagttcttatgtttaatgtggcattggtc
ctacaaagattagctacctctgtcctgaaagatgaaaagagtaatctgaaggaagtactt
aatgctgtgaaagaactggagcttgcacatagatacttcagttacttgagtaaagtggga
gataaaatgaggttcgatttggcccttgctgctactgaagccaggcagtgttctgattta
ctgagccaggcccaataccatgtggccagggcacgcaaacaggatgaagaggaaagagag
ttgcgagcaaaacaagagcaggaaaaagaactactaaggcagaaacttcttaaggaacag
gaagagaaacgtctcagagaaaaggaggaacaaaagaaacttctggaacagcgggctcaa
tatgtagagaagaccaaaaatattcttatgtttactggagagactgaagcaacaaaagaa
aaaaaaagaggtggtggtgggcggcgttccaagaagggaggagagtttgatgaatttgtc
aatgatgacactgatgatgatatgcctatatccaaaaagaagaagagaagaaagggcagt
ggtagtgaaccagaaggtgaagaagaggagggtggtgagagaaagaagaaaaagagaaga
agacctacaaaaggagaagaaggatcggatgatgatgaaacagaaaatggccccaaaacg
aaaaagcgccgtcctccaagaacagagaagaaaaaggctcccaagccagaacgtctgcct
ccttcaatgaaaggaaaaataaaatccaaagccatcatatcatcaagtgatgattcttca
gatgaagataaacttaaaattgctgatgaaggacatcctcgacacagcaacagcaacagc
gactcagacgagggtgaacaagaccatgaacggcggaagaggggagactcttcggatagt
gattccgacgagaaccagaacaaatctggcagtgaggccggcagtcctcggagggtccga
agacctcggtcagatgaggattcagacagtgaccagcaacccagaaagaggaggccctca
ggttctgaacagtctgacaatgagtctgtgcagtcagggagaagccgctcaggaggctcc
gaaaacgactctcgacctgcttctcccagtgccgagtcagatcatgattcagagagaggg
tctgataatgagggttctggccgaggctctggcaatgaatcagaaccagagggatccaac
aatgaggcctccgatcggggctcagaacatgggtcagatgatagcgactag
DBGET
integrated database retrieval system
