Suncus etruscus (white-toothed pygmy shrew): 126018916
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Entry
126018916 CDS
T09902
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
setr03420
Nucleotide excision repair
setr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126018916 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
126018916 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126018916 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126018916 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126018916 (GTF2H1)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126018916 (GTF2H1)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126018916 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
126018916
NCBI-ProteinID:
XP_049636983
LinkDB
All DBs
Position
9:68508922..68538332
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKELLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVTAAESSSTANHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSKSLKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSSMDGNCGDADCLQPAVKRAKLQESIEY
EDLGKNNSVKTIALNLQKSDRYYHGPTPIQSLQYATSQDIINSFQSIRHEMEAYTPKLTQ
VLSSSAASSTIAALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttttgctgattgtaaagaaagtgcggcaaaagaagcag
gatggagcactgtacctcatggcagaaagaattgcttgggcacctgaaggcaaggataga
tttacaatcagccatatgtatgcagatataaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcagcttcaactggtcctgcatgcaggcgatacaactaactttcatttttcc
aatgaaagcacagcagtgaaagagcgggatgcagtaaaagagcttcttcagcagctgctg
cctaaatttaagaggaaagcaaataaagaactggaagagaaaaacaggatgcttcaagaa
gatccggttttgtttcagctttataaagaccttgttgttagtcaagtgatcagtgctgag
gaattctgggccaaccgtttaaatgtgacagcagcagagagttcctccacagctaatcat
aaacaggatgttggcatttctgcagcatttttggctgacgttcgaccccagacagatgga
tgtaatggtctgagatacaatttaacttctgatattattgagtccatatttagaacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccacacaacatgacagaaaaagaattc
tggacccgtttttttcagtcccattattttcacagggaccgactgaatacagggtcaaag
gacctatttgcagaatgtgccaaaatagatgaaaaaggattaaaaacaatggtttcatta
ggggtgaaaaatccactacttgatttgacagctttagaagataaaccattggatgagggt
tatggcatttcctctgtgccctctacttccaattctaaatctctgaaggagaatagtaat
gctgccatcatcaaaagatttaaccatcacagtgccatggttctggcagcaggtctcagg
aaacaagaagcacaaaatgaacagaacggtgagcccagcagcatggatggaaattgtgga
gatgcagattgccttcagcctgcggtcaaaagggcaaagttacaagagtccattgaatat
gaagacttgggaaaaaataactctgtaaaaacaattgcactaaacctccagaagtcagat
aggtattaccatggtcctaccccaattcagtctctacagtatgcaacaagtcaagatatt
attaattcttttcaaagtattagacatgaaatggaagcttacacacctaaattaactcag
gttctctcaagtagtgccgccagcagtaccattgcagcactgtcacctggaggagcactt
atgcaaggagggacacagcaagccataaaccagatggtgccaaatgacattcagtctgaa
ttaaaacacctgtatgtggctgttggagaacttctccggcacttctggtcctgctttcct
gttaatacaccatttttagaagagaaggtagtgaaaatgaaaagtaatttggaacgattt
caagttacaaagctctgcccattccaagagaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaggagatgctgcagacagcctacaacaagctccacacgtggcag
tcacggcgtctgatgaagaaaacgtga
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