Suncus etruscus (white-toothed pygmy shrew): 126018998
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Entry
126018998 CDS
T09902
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126018998 (SOX6)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126018998 (SOX6)
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Phage_holin_7_1
Motif
Other DBs
NCBI-GeneID:
126018998
NCBI-ProteinID:
XP_049637077
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All DBs
Position
9:complement(66120884..66679645)
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AA seq
802 aa
AA seq
DB search
MSSKQATSPFSCAADGEEGMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
NTIQQDADWDSMLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP
GDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNTAGAVSP
TGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQSLFPASKTSPVNLPN
KSSIPSPIGGSLGRGSSLGKWKGHHLEETYELDILSSLNSPALFGDQDTVMKAIQEARKM
REQIQREQQQQQPHGVDGKLSSMNNMGLNNCRNEKERTRFENLGPQLTGKSGEDGKLGPG
VIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMN
AFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYP
NYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGA
ITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDD
YEDDPKSDYSSENEAPEAVSAN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaagccacctctccattttcctgtgcagctgatggagaggaaggtatg
acccaagatttgacctcaagggaaaaggaagagggaagtgaccaacatgtggcctcccat
ctgcctctgcaccccataatgcacaacaaacctcactctgaggagctaccaacacttgtc
aataccattcagcaagatgctgattgggacagcatgctgtcatctcagcaaagaatggag
tcagaaaataataagttatgttccctatactccttccgaaatacctctacctcaccacat
aagcctgacgaagggagtcgggatcgtgagataatgaccagtgttacttttggaacccca
gaacgccgcaaagggagccttgccgatgtggtggacacactgaaacagaagaagcttgag
gaaatgactcggacagaacaagaggattcttcctgcatggaaaaactactttcaaaagat
tggaaggaaaaaatggaaagactaaataccagtgagcttcttggagaaattaaaggtaca
cctgagagcctggcagaaaaagaacggcagctctctaccatgattacgcagctgatcagt
ttacgggagcagctcctggcagcgcatgatgaacagaaaaagctggcagcctcacaaatt
gagaaacaacggcagcaaatggaccttgctcgccaacagcaagaacagattgcaagacaa
cagcagcaactcctgcaacagcagcacaaaatcaatctattgcagcaacagatccagcag
gttcagggtcacatgcctccgctcatgatcccaatttttccacatgaccagcggaccttg
gcagcagctgctgctgcccaacagggattcctcttccctcctggaataacatacaaacca
ggtgataactaccctgtacagttcattccatcaacaatggcagctgctgctgcttctgga
ctcagccctttacagctccagcagctctatgccgctcagctggccagcatgcaggtgtca
cctggagcaaagatgccatcaactccacagccaccaaacacagcaggggcagtctcacct
actgggataaaaaatgaaaagagggggaccagccctgtaactcaagttaaggatgaagca
gcagcacagccgctgaatctctcctcccgacctaagacagctgaacctgtaaagtcccca
acttctcccacccagagcctcttcccagctagcaaaaccagccctgtcaacctgcccaac
aaaagcagcatccccagccccatcggaggaagcctgggaagaggatcctctttaggtaaa
tggaaaggtcatcacctggaagagacttatgaattagatatcctgtccagtctcaactct
cctgcattgtttggagatcaggatacagtgatgaaagccattcaggaggctcgaaaaatg
cgagaacagatccagagggagcaacaacagcaacagccacatggcgttgatggtaaactg
tcctccatgaataatatgggactgaataactgcaggaatgaaaaggaaagaacacgtttt
gagaatttggggccccagttaacaggaaaatctggtgaagatggaaagctgggcccaggt
gtcatcgatcttactcggccagaagatgcagagggaagtaaagcaatgaatggctctgca
gctaaactacagcagtattattgttggccaacaggaggtgccactgtggctgaagcacgt
gtctacagggatgcccggggccgggccagcagtgagccacacatcaagcgaccaatgaat
gctttcatggtttgggcaaaggacgagaggaggaaaatccttcaagcctttcctgacatg
cataactccaacattagcaaaatcttagggtctcgctggaaatccatgtctaaccaagag
aagcaaccttattatgaagagcaggcccggcttagcaagatccacttagagaagtaccca
aactataaatacaaacctcgacccaaacgaacctgcattgttgatggcaaaaaactccgc
atcggagagtacaaacaattgatgaggtctcggagacaggagatgaggcagttctttact
gtggggcagcagcctcaaattccaatcaccacaggaacaggtgttgtgtatcctggtgct
attactatggcaactaccacaccatcacctcagatgacatctgactgctctagcacctct
gccagcccagagcccagcctcccggtcatccagagcacttatggtatgaagacagacggt
ggaagcctagctggaaatgagatgattaatggagaggatgaaatggaaatgtatgacgac
tatgaagatgatcccaaatcagactatagcagtgaaaatgaagccccggaggctgtcagt
gccaactga
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