Suncus etruscus (white-toothed pygmy shrew): 126019008
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Entry
126019008 CDS
T09902
Symbol
SF1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1
KO
K13095
splicing factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126019008 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
126019008 (SF1)
Spliceosome [BR:
setr03041
]
Complex A
Other components
Complex A specific factors
126019008 (SF1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
126019008
NCBI-ProteinID:
XP_049637083
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All DBs
Position
9:complement(108667349..108684097)
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AA seq
639 aa
AA seq
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MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
TTQSRPPWMNSGPSDSRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASTTPLPWQQNTTTTTTSAGTGS
IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctggacttcccaagtaagaagcggaagagaagc
cgatggaaccaagacacaatggaacagaagacagtgattccaggaatgcccacagttatt
cctcctggactcactcgggaacaagagagagcttatatagtgcaactgcagatagaagac
ctgactcgtaaactgcgcacaggagacctgggcatcccccctaaccctgaggacaggtcc
ccttcccctgagcccatctacaatagtgaggggaagcggctcaacacccgagagtttcgt
acccgcaaaaaactcgaggaggagcggcacaacctcatcacggaaatggttgcgctcaac
cctgacttcaagccgcctgcagattacaaaccaccagcaacacgtgtgagtgataaagta
atgattccacaagatgaatatccagaaatcaactttgtgggcttgctcattgggcccaga
gggaacaccttgaagaacatagagaaagaatgcaacgccaagatcatgatccgggggaaa
gggtctgtgaaagaagggaaagtggggcgcaaagatggccagatgttgcctggggaagat
gagccacttcatgctctggttactgccaacaccatggagaatgtgaagaaagcggtagaa
cagatcagaaacattctaaagcaggggattgagacccctgaggaccagaatgacctccgg
aagatgcagcttcgggagttagctcgcttgaatgggacccttcgggaagacgataacagg
atcttaagaccctggcaaagctcagagactcgcagcattaccaatactacggtgtgcacc
aagtgcggaggggccggccacattgcttccgactgtaaattccaaaggcctggagacccc
caatcagctcaggataaagcacggatggataaagaatatttgtccctcatggctgaactg
ggggaagcacctgtcccagcatctgtgggctctacttctggcccagcgaccacacctctg
gccagtgcacctcgacctgctgctcccgccaacaaccctcctccaccgtctctcatgtct
accactcagagccgcccgccgtggatgaattccggtccttccgacagtcggccgtatcac
ggcatgcatggaggtggccccgggggtcctggaggtggcccgcacagtttcccacacccg
ttacctagcctgacaggtgggcacggtggacaccccatgcagcacaacccgaatggacca
ccacctccatggatgcagccgcctccgccaccgatgaaccagggcccccacccgcctggg
caccatggccctcctccaatggatcagtacctgggaagtacgcctgtgggctctggggtc
tatcgcctgcatcaaggaaaaggtatgatgccgccgccgcctatgggcatgatgccgcca
ccgccgccgcctcccagtgggcagcccccgccccctccctctggcccgcttcccccatgg
cagcagcagcagcagcagcctcctccgcccccgccgcccagcagcagtatggcttccact
acccccttgccatggcagcaaaatacgacgactaccaccacgagcgctggcacagggtcc
atcccgccatggcaacagcagcaggcggctgccgcagcttctccaggagcccctcagatg
caaggcaaccccactatggtgcccctgccccccggggtccagccgcctctgccgcccggg
gcccctccccctccgccgcctccgccacctggttccgccggcatgatgtatgccccgccc
ccccctccgccgcctcccatggacccttctaactttgtcaccatgatgggcatgggggtg
gcgggcatgccgcccttcgggatgcctccagctcccccaccgcctccaccacagaactag
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