Suncus etruscus (white-toothed pygmy shrew): 126019041
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Entry
126019041 CDS
T09902
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
126019041 (SHANK2)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
SAM_4
Motif
Other DBs
NCBI-GeneID:
126019041
NCBI-ProteinID:
XP_049637140
LinkDB
All DBs
Position
9:complement(112097707..112267350)
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AA seq
1873 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSAGSESDSSKEDSVYGTIRAATSGKTAATQAAESKDHTLVI
RILIHDLQQTKCLRFNPDATVWAAKQRVLCSLTQSLKDVLNYGLFQPASNGRDGKFLDEE
RLLREYPQPTGKGVPSLEFRYKKRVYKQVSMDDKQLARLHSKTNLKRCMEHVQHRAVDKI
VKVLERGLDPNFHDLDTGETPLTLAAQLEEPAEVLKALRNGGAHLDFRARDGMTALHRAA
RARNLPALQTLLELGASPDYKDSYGLTPLYHTAIVGGDPGCCELLLHEHATLCCPDENGW
HEIHQACRYGHVQQLEHLLFYGADMGAQNASGNTALHICALYNQDSCAKVLLFRGGDKEL
KNYNSQTPFQVAIIAGNFELADYIKNHKETDVVPLVPTRRTGSGVPPRARDPAGPCILEE
PVGWSPAAARWPGSSGDQPQWSGRVPFREAPAYSNRRRRLPNTLTAPRVLLRSNSDNNLN
CSAPEWAVRPAAPAGPRSLSPQLLQHEGVGPALGSTPGPRSRSPSLHKLGGAEEAQATQQ
PWHVGPAFLPGASKDQLPNTQFPGPRRKLYSAVPGRLFVVVKPYQPQVDGEIPLHRGDRV
KVLSIGEGGFWEGSSRGHIGWFPAECVEEVQGRPQDVRAEPRADRSKKLFRHYTVGPYDS
FDAASDCTVQDKTVVLQKTDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGV
AWQAGLRTGDFLIEVNSENVVKVGHRQVVTMIRQGGNHLVLKVVTVTRSLDPDDTARKKA
PPPPKRAPTTALTLRSKSMTSELEELGLSLVDKASVRKKKDKAEEKVPRSAESMAEPRVA
SIRPRPSSRCFPPISDMNSMYERQGIAVMTPTVPGSPKGPMLGLPRGTMRRQKSIDSRLF
LSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPTTYNCPKSPTPR
VYGTIKPAFSPNPAAKVVPTVRSDTVAAVMRDKGLYYRRELDRYSLDSEDLYSRAAAQAN
FRHKRGQMPENPYSEVGKLASKAVYVPAKPARRKGMLVKQPNVEDSPEKTCSIPIPTIIV
KEPSTSSSGRSSQGSSVEAEPAAPEPGQLRPDDGLTVSSPFAAAIAGAVRDREKRLEARR
NSPAFLSTDLGDEDVGLGLPTPPPPRPNTNAAATAEEDGAEPPSPSPPSGPPAREPENHL
AGALEAGTQGEAGRPQNPKGDSSPEGYIHPLTGRPLDPSSPLALALSARDRAIKEAQQGP
KGEAPKADLHQPLYIDTKMRPSPDAAFPGGPRQNTRGPLRRQETENKYEAELKERQGDER
KNMFIDIMDTAQRKSAGLLMVHTVDARPDAFLEEEDEKEADQDAEPTCPPLEVPADAPDT
EGALQISGGPEPAANANAAPGRTLVAAGSVEEAVALPFRIPPPPLASVDLDEDFIFTEPL
PPPLEFANSFDIPDDRVASVPTTPPDAGKPKSGGVSQGPSLHSGQPTHPADAKKPASLAN
CLPATFPPPPESFDAVTDSGIEEADSRSSSDHHLETTSTVSTVSSLSTLSSEGGEPVDTC
TVYADGQAFLADKPPVPPKPKLKPLVVKPNALYQDALPEEDAEGLAGAPTAAPPPPGTAK
ALPPRPSKLWGDGPEVKSPILSGPKANVISELNSILQQMNREKTAKPREGLDMAMGAKAA
TGLVPRSPDVAGTVSGTRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSP
TELPAEPLTAPLCAVSPAPSLTDVFSLPGPSAAGELFGLNPVGRSRSPSPSVLQQPLPNK
PFSTKPVHLWTKPDVADWLESLNLGEHRAAFLDNEIDGSHLPSLQKEDLIDLGVTRVGHR
MNIERALKQLLDR
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagccccacgtccagtgaggacgagatggcccagagcttctccgactactcg
gctggctccgagtcggacagctccaaggaggattcagtctacggcaccatccgcgctgcc
acgtcggggaaaactgccgcaacccaggccgccgagagcaaggaccacacgctggtcatc
cgcatcctcatccatgacttgcagcaaacgaagtgccttcgcttcaaccccgatgccacg
gtgtgggccgccaagcagcgggtcctgtgctccctgacgcagagcctcaaggatgtgctc
aactacgggcttttccagccggccagcaatggccgcgatggcaaattcctggatgaggag
aggctgctacgcgaatacccgcagcccacgggcaagggtgtgccctcgctggagtttcgc
tacaagaagcgggtgtacaagcaggtcagcatggacgacaagcagctggccaggctccac
tccaagaccaacctgaagaggtgcatggagcacgtgcagcatcgagcggtggacaagatc
gtcaaggtgctggagcgcggcctggaccccaacttccacgacctggacacgggagagacg
cccctgacgctggcggcgcagctggaggagccggcggaggtgctgaaggcgctgcggaac
gggggcgcgcacctcgacttccgcgcccgcgacggcatgaccgcgctgcaccgggcggcc
cgcgcgcgcaacctgccggcgctccagacgctgctggagctcggcgcgtcccccgactac
aaggacagctacgggctgacacccctgtaccacacggccatcgtggggggcgaccccggc
tgctgcgagctgctgctgcacgagcatgccaccctctgctgcccagacgagaacggctgg
cacgagatccaccaggcctgcaggtacggccacgtgcagcagctggagcacctgctcttc
tacggggccgacatgggtgcccagaatgcatcggggaacacggccctgcacatctgtgcg
ctctacaaccaggacagctgtgccaaggtgctgctcttccggggcggagacaaggaactg
aagaactacaacagccagaccccgttccaggtggccatcatcgcagggaactttgaactg
gctgactacatcaagaaccacaaggagacggatgtggtcccccttgtgccaaccaggagg
accggttctggggtgcctcctcgggcccgtgaccctgcagggccttgcatcctggaggag
ccagtgggctggtcccccgcagccgcccgctggcccggaagcagcggtgaccagcctcag
tggagtggccgtgtgcccttccgagaggccccggcctactccaaccgcaggcggcggctc
cccaacacgctgacggcaccccgagttctgctcaggtccaacagcgacaacaacctcaac
tgcagtgcccccgagtgggccgtgcgtcccgcggcccctgctggccctcgaagcctgtct
ccacagctgctgcagcatgagggtgtgggcccggcccttggcagcaccccgggaccccgc
agccgctccccgtcccttcacaagctgggcggtgcagaggaagctcaggccacgcagcag
ccatggcacgtgggacccgccttcttgcctggcgccagcaaagaccagctccccaacacc
cagttcccgggaccccggcggaagctctacagtgcggtgcctgggcgcctcttcgtggtg
gtcaagccgtaccagccccaagtggatggggagatccctctgcatcgcggggacagggtc
aaagttctgagcatcggcgaaggaggcttctgggaaggcagctcccgtggccatattgga
tggttcccggccgagtgcgtggaggaagtgcaaggcaggccccaggacgtgcgggcagag
ccccgcgcggaccgcagcaagaagctctttcgacactacaccgtgggcccttatgacagc
ttcgatgcagccagcgactgcacggtccaggacaagacggtggtgctgcagaaaaccgac
aatgaggggttcggcttcgtgctccggggggccaaagccgatacacccatcgaggagttc
acgcctacgcccgccttcccagcgctgcagtacctggagtccgtggacgaaggcggcgtg
gcctggcaggctgggctgcggaccggagactttctgatcgaggtgaacagcgagaatgtt
gtgaaagttggtcaccggcaggtggtgaccatgatccgccagggcgggaaccacctggtc
ctcaaggtcgtcacggtgacccggtccctggaccccgatgacacggcccggaagaaagcc
ccgccaccacccaagcgagccccgaccactgcgctcaccctgcgctccaagtcaatgacg
tcggagctggaggagctcggcctctcgctagtggataaagcctccgtgcggaagaagaag
gataaggctgaggaaaaggtgccccggagtgctgagagcatggccgagccccgggtggcc
tccatccgcccgaggcccagcagccgctgcttcccgcccatctccgacatgaactccatg
tatgaacgccaggggattgctgtgatgacgcccaccgttcccgggagccccaaaggcccg
atgctgggcctgccccgaggtacgatgcgaaggcagaagtccatagacagcaggctcttt
ctctcagggataacggaggaagagcgacagttcctggcgcccccgatgctcaagttcacg
cggagcctgtccatgccggacacctcggaggacatcccgccgcccccgcagtcggtgccc
ccgtccccgccgcccccctcccccaccacctacaactgccccaagtcccccacgccccgg
gtctacgggaccatcaagccggccttcagccccaaccccgccgccaaggtggtgcccacc
gtgcgctcggacacggtggcggccgtgatgcgggacaagggcctgtactaccgccgcgag
ctggaccgctactctctggactccgaggacctgtacagccgcgcggctgcccaggccaac
ttccgccacaagcggggccagatgcccgagaacccctactcggaggtgggcaagctggcc
agcaaggccgtgtacgtgcccgccaagccggcgcggcggaagggcatgctggtgaagcag
cccaacgtggaggacagccccgagaagacgtgctccatccccatccccaccatcatcgtc
aaggagccgtccaccagcagcagcggccgcagcagccagggcagcagcgtggaggccgag
ccggccgctcccgagcccggccagctgcggcccgacgacggcctcaccgtcagcagcccc
ttcgccgcagccatcgccggtgccgtgcgcgaccgtgagaagcggctggaggcgcggcgg
aactccccggccttcctctccaccgacctgggcgacgaggacgtgggcctgggcctgccc
accccgccgccaccgcgccccaacaccaatgccgctgccacagccgaggaggacggggcc
gagccgccgtctccgtccccgccgtcggggccaccggcccgggagcctgagaaccacctg
gctggggccctggaagccggcactcagggggaggccggcaggccgcagaaccccaaaggc
gacagcagccccgagggctacatccacccgctcaccgggaggccgctggaccccagctct
ccactggccttagcgctgtccgccagggaccgagccataaaggaggcccagcagggcccc
aagggggaggcccccaaggccgacctccaccagcctctctacattgataccaaaatgcgg
cccagcccggacgccgccttccccggggggccccggcagaacacgcgggggcccctgcgg
cgccaggagacggagaacaagtacgaggcggagctgaaggagcgccagggcgacgagcga
aagaacatgttcatcgacatcatggacacggcccagcgcaagtcggcaggcctgctcatg
gtgcacaccgtggacgcccggccggatgccttcctggaggaggaggatgagaaggaggcc
gaccaggacgccgagcccacctgcccgccgctcgaggtgcctgcggacgcccctgacacc
gaaggtgctttacagatctcgggggggcccgagcccgctgccaatgccaacgccgcgccg
ggcagaaccctggtggcggcgggatccgtggaggaggcggtggccctgcctttccgtatc
cccccgcccccgctggcgtccgtggacctggacgaggattttattttcaccgagccattg
ccaccgcccctggaattcgccaacagttttgatatccccgacgaccgcgtcgcctctgtg
cccaccacgccccctgacgcgggcaagccgaagtcgggcggcgtctcccagggcccctcg
ctgcactcgggccagcccacccaccccgccgatgccaagaagccagccagcctcgccaac
tgcctgcccgccaccttcccgccgcccccagagagctttgacgccgtcacggactccggg
atcgaggaggcggacagccgcagcagcagcgaccaccacctggagaccaccagcaccgtg
tccaccgtgtccagcctctccacgctgtcctccgagggcggcgagcccgtggacacgtgc
accgtctacgccgacggccaggccttcctggcggacaagcccccggtgccgccaaagccc
aagctgaagcccctcgtggtcaagcccaacgctctctaccaggacgcgctcccggaggag
gacgcggagggcctggccggcgccccgacagcagccccacccccacccgggacggccaag
gccctgccgcctcggccctccaagctgtggggtgacggccctgaggtcaagagccccatc
ctttctggccccaaggccaacgtgatcagcgagttgaattccatcttgcagcaaatgaac
cgggagaagacggccaagccccgggaaggcctggacatggcgatgggagccaaggccgcc
acgggcctagtgccaagaagcccggacgtcgccggcaccgtctcagggacacggagcacg
acggtcaccttcacggtccgcccgggcacctcccagcccatcacgctgcagagccggccg
ccagactacgaaagtaggacctcaggaaccaggcgcgccccaagcccggtggtgtcgccc
acggagctgcccgcggagcccctgacggccccgctgtgcgccgtgtcgccagcccccagc
ctcacagacgtcttcagtctccccggcccgtcagcggccggggagctgtttgggctgaac
cccgtgggccgcagccgctccccgtccccctccgtcctgcagcagccgctccccaacaaa
cccttcagcaccaagcccgtccacctgtggactaagcctgacgtggccgactggctggag
agcctgaacctgggcgagcacagagccgccttcctggacaacgagatcgacggcagccac
ctccccagcctccagaaagaggacctcatcgacctgggcgtgacgcgagtcggccacagg
atgaacatcgaaagggctctcaagcagctgctggacagataa
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