Suncus etruscus (white-toothed pygmy shrew): 126019171
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Entry
126019171 CDS
T09902
Symbol
EDAR
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04060
Cytokine-cytokine receptor interaction
setr04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
126019171 (EDAR)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
126019171 (EDAR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
setr04050
]
126019171 (EDAR)
Cytokine receptors [BR:
setr04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
126019171 (EDAR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
SpoIIIAH
TNFR_c6
PFF1_TM
SID-1_RNA_chan
FHIPEP
Motif
Other DBs
NCBI-GeneID:
126019171
NCBI-ProteinID:
XP_049637329
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Position
9:complement(34373039..34469401)
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AA seq
460 aa
AA seq
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MAHPGDYKQIPWLPVLVVSLMCSIRAEYSSCGENEYYNKTTGLCHVCPRCRPGEEPYLNC
GYGTKDEGYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVLTPGDMQNDAECGPCLPGY
YMLENRPRNIYGMVCYSCLLAPPNTKKCLGATSGDSANLPVTYGSSTIAPSQHTHKGPSS
RSLSSRPTPAEISGQGHLATALIIAMSTIFIMAIAIVLVIMFYIMKTKPSAPACCSSHPV
KSVEVQVSKEEKKESQDSVILFSEKEESEKLTETSAKTAKSESDASSENEKLLSRSMDSD
EEHSTDKQGSPEQSLLSLVQLTREKSVTTKSAGIHSRRKKILDMYSSVSGMVEGLSPTEL
PFDCLEKTSRMLSSTYNSEKAIVKTWRHLAESFGLKRDEIGVMTDGMQLFDRISTAGYSI
PELLTNLVQIERLDAVESLCVDILEWAGVVPPASLPPSTS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcccacccaggggactacaagcagataccctggctccctgtgctggtggtgtctctg
atgtgctcaatcagggcagaatactccagctgtggtgagaatgagtattacaacaaaacc
actgggctgtgccatgtgtgtcctcggtgtagaccaggggaagaaccctacctgaactgt
ggatatggcaccaaagatgaaggttatggctgtgtgccctgcccagcagagaagttttct
aagggaggctaccagatttgcagacgccataaagactgcgaaggcttcttccgggccact
gtgcttacaccgggggacatgcagaatgacgctgagtgtggaccttgtctccctggctac
tatatgttggaaaacagacccaggaacatctacggcatggtctgctactcctgcctcctg
gcaccccccaacaccaagaaatgtttgggagccacctctggagactctgccaacctccct
gtcacatatggaagcagcactattgctccctcccagcatacccacaaagggccctcttcc
aggtcactgtcgtctcgtccaactccagcagagatctcaggtcaaggacacctggccaca
gctctgatcattgccatgtccaccatctttatcatggctatagccattgtccttgtcatc
atgttctacatcatgaagacaaagccttcagctccagcctgctgtagcagccacccagtg
aagagtgtggaagttcaagtaagcaaagaggagaagaaagagagccaagacagtgtcata
cttttctctgaaaaggaagaatctgagaagctgacagaaacttcagcaaagactgctaaa
agtgagagtgatgcttcttctgagaatgaaaaactgctgagtcggagcatggacagtgat
gaggagcactcgacagacaagcaaggatccccagagcagagtctgctgtctctggttcag
ctcactcgagagaagtcagtcaccaccaagtcagcagggattcatagtcgaaggaaaaag
atattggatatgtattccagtgtgagtggcatggttgaaggcttaagccccacagagctg
ccatttgactgcctggagaagacaagcagaatgctcagttccacatacaactctgaaaaa
gccattgtgaaaacgtggcgccaccttgctgagagctttggacttaaaagggatgagatt
ggggtcatgacagatggcatgcagctttttgatcgcattagcacagctggctacagcatc
ccggaactgcttacaaatctggtgcaaattgagaggttggatgctgtggagtccttgtgt
gtagatatactggagtgggcaggggttgtgccacctgcatctctaccaccctccacttcc
tga
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