Suncus etruscus (white-toothed pygmy shrew): 126020021
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Entry
126020021 CDS
T09902
Symbol
GABPB1
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126020021 (GABPB1)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126020021 (GABPB1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
126020021 (GABPB1)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
126020021 (GABPB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
CCDC84
LAMTOR5
Motif
Other DBs
NCBI-GeneID:
126020021
NCBI-ProteinID:
XP_049637421
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Position
10:complement(94736473..94808233)
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AA seq
395 aa
AA seq
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MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
ELLIKYGADVHTQSKFCKTAFDISVDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
PQFIIGPGGVVNLTGLVSSENSAKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggtagatttgggaaagaagcttctagaagcagcacgtgcagggcaagatgat
gaagttcgtattttgatggcgaatggagctccttttactacagactggctaggaacttct
ccacttcatctggcagcacaatatggacattattccaccacagaagtgcttctccgagct
ggtgtaagtagggatgccagaaccaaagtggaccgaacgccattacatatggcagcttct
gagggccatgcaagcatagtagaggtgttgcttaagcatggtgctgatgtcaatgccaag
gacatgttaaagatgacagctctacattgggccacagagcataatcatcaggaggtggtg
gaacttttaatcaaatatggtgctgatgtacacacgcaaagtaaattttgtaaaactgca
tttgatatttcagtagacaatgggaatgaagatttagcagagatactacagattgctatg
cagaaccaaatcaacacaaacccagagagtcctgacactgtgacgatacatgctgcaaca
ccacagtttatcattggacctggaggggtggtgaacctaacaggtctggtatcttcagaa
aattcagccaaggcaacagatgaaacaggagtgtctgctgttcagtttggaaactcttct
acatcagtattagcgacattagctgccttagccgaagcatctgctccgttatccaattct
tcagaaaccccagtagtggccacggaggaagtagtcactgcagaatctgtggatggtgca
attcagcaagtagttagttcggggggtcagcaagtcatcacaatagttacagatggaatt
cagcttggaaatttgcactccattccaacaagcggaataggccaacccatcattgtgacc
atgccagatggacagcaagtattgacagttccagcaacggacattgctgaagaaactgtt
ataagcgaagagccaccagctaagagacaatgtatcgaaataattgaaaaccgggtggaa
tctgcagaaatagaagaaagagaagcccttcaaaaacagctggatgaagcaaatcgagaa
gcacaaaagtatcgacagcagcttctaaagaaagaacaggaagcagaggcctacagacag
aaattagaagcaatgactcgacttcagactaataaagaagctgtttaa
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