Suncus etruscus (white-toothed pygmy shrew): 126020107
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Entry
126020107 CDS
T09902
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
126020107 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126020107 (MYO5B)
04131 Membrane trafficking [BR:
setr04131
]
126020107 (MYO5B)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126020107 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126020107 (MYO5B)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
126020107 (MYO5B)
mRNA cycle factors
P-body specific factors
126020107 (MYO5B)
Membrane trafficking [BR:
setr04131
]
Others
Actin-binding proteins
Myosins
126020107 (MYO5B)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
126020107 (MYO5B)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
126020107 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
126020107
NCBI-ProteinID:
XP_049637542
LinkDB
All DBs
Position
10:79747726..79958082
Genome browser
AA seq
1818 aa
AA seq
DB search
MSVRELYSRHTRVWVPDPEEVWRSAELTKDYQEGDKSLQLRLEDGTIQESPIDVQSNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYNGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRFHIIGANMR
TYLLEKSRVVFQADYERNYHIFYQLCAAASLPECKELALTCAEDFFYTSQGGDTSIEGVD
DAEDFEKTRQAFILLGVRESHQISIFKIIASILHLGNVAIQAERDGESCSISPQDEHLSN
FCRLLGVEQAQMQHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHLYAQLFSWIVEHV
NKALHTSLKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHSASQHFQK
PRMSNTAFIVIHFADKVEYLSDGFLEKNRDTVHEEQINILKASKFPLVADLFHDDKDPVP
ATTPTGKGSSNKINVRSARPPLKASNKEHKKTVGHQFRTSLQLLMETLNATTPHYVRCIK
PNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLVKKRELANT
DKKAICRSVLESVLKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWL
QRVRYRRLRRATMTLQRYCRGHLARRLAEHLRRTRAAVVLQKQYRMHRARLAYLRVRKAA
VVIQAFVRGMFVRRNYQKVLAEHKATIIQKHVRGWMARKHFQQLRGAAVVIQCAFRMLKA
KQALKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKMLSEQLSTATSTHSMEV
ARLKKELAHYQQSREEDSSPRLQEELDNLQAELDRAQSERKVLEDTHARENSELRKRVAE
LEQENALLKDEKEQLNQQIQRHSKDESARSSAQGEALVVKKELEEERSRYQNLVKEYSRL
EQRYDNLRDEQTPGHRRNPSNQSSLESDSNNPSISMSEVGDTEDALQQVEDTGLEKAAMD
LTVFLKLQKRVRELEQERKKLQVQLEKRDQQDSKKGQMEPVKNEVDLAQDEDLAYNSLKR
QELESENKKLKNDLNELRKAMADHAMQASSPYGSTDGYSLLLDQLRLANEELEVRKEEVL
ILRTQIVSSDQRRHAGRSTDINARTSWPNSEKHVDQEDAIEAYHGVCQTNRLLEAQLQAQ
SREHEQKVEQLQAQVEALREELDRQQQTFAQTLLLSPEAQVEFGVQQEISRLTNENLDLK
EVVEKLEKNERKLKKQLKIYMKKVQDLEATQALAQSDQRRQELHRQVTVQRKEKDFQGML
EYHQEDEALLIRSLVTDLKPQALVGAVPCLPAYILYMCIRHADYVNDDVKVHSLLTATIN
GIKRVLKKHSDDFEMTSFWLANTCRLLHCLKQYSGDEGFMTQNTAKQNEHCLKNFDLTEY
RQVLSDLSIQIYQQLIKIAEGVLQPMIVSAMLENESIQGLSGVKPTGYRNRSSSMVDGEN
TYCLEAVVRQLNTFHMVMGDQGLDPEIVLQVFKQLFYMINAVTLNNLLLRKDVCSWSTGM
QLRYNISQLEEWLRGRNLQQSGAAQTMEPLIQAAQLLQLKKKTPEDAEAICSLCTALSTQ
QIVKILNLYTPLNEFEERVTVAFIRTIQAQLQERNDPQQLLLDFKHMFPVLFPFNPSSLT
MDSIHIPASLNLEFLSEV
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccgcgaactgtacagccggcacacccgggtctgggtccctgaccctgaggaa
gtgtggcgctcagccgagttaaccaaggactatcaggagggagacaaaagcctccagctc
agactggaagatggaacgattcaggaaagccccatcgatgtccaaagcaaccagctgccc
ttcttgcggaacccagatatcttggtgggtgaaaacgacctcactgccctcagctatcta
cacgagcccgcagttttgcacaatctgaaggtccgcttcctagaatcaaaccacatctac
acatactgtggtattgtgcttgttgccatcaacccttatgaacagttgccaatctatgga
caagatgtcatctatgcgtacaacggccaaaatatgggtgatatggacccccacatcttt
gcggtggcagaagaggcctataagcagatggccagagatgagaagaaccagtctatcatt
gtcagcggcgagtcgggagccggcaagactgtgtcagccaagtatgccatgcgctatttt
gccacagtgggaggctcggccagtgacaccaatattgaagagaaggtgctggcgtccagc
cccatcatggaggccatcggaaatgccaaaaccacacgcaatgacaacagtagccgtttc
gggaagtacattcagattggctttgacaagaggttccacatcatcggtgccaacatgagg
acgtacctgctggagaaatccagagtggtcttccaggctgactacgagcgaaattaccac
atcttctaccagctgtgcgcggcagccagcctccctgagtgcaaagaactggctctcacc
tgtgcagaggatttcttctacacgtcgcagggcggggacacatccattgagggtgtggat
gatgcagaggactttgagaagacacgccaggctttcatcctccttggagtccgtgagtcc
catcagataagcatttttaagataattgcttctattctgcacctcggaaacgtggcgatc
caggcagagcgtgatggcgaatcctgcagcatctcgccccaggatgagcacctgagcaac
ttctgccgcctgctgggtgtggagcaggcgcagatgcagcactggctgtgccaccgcaag
ctggtcaccacctcagagacctacgtaaagaccatgtccctgcagcaggtggtcaacgca
cgcaacgccctggccaagcacctatatgcgcagctgttcagctggattgtggagcatgtg
aacaaggccctgcacacgtccctcaagcagcactcattcattggggtcctagacatatat
gggtttgaaacctttgaggtcaacagctttgagcagttctgcatcaactacgccaacgag
aagctccagcagcagttcaactcgcacgtcttcaaactggagcaagaagaatacatgaag
gagcagatcccttggaccttgattgatttctatgacaaccagccctgtatcgacctcata
gaggccaagctgggcatcttggacctgctggatgaagagtgtaaggtgcccaaaggaacc
gaccagaactgggcccagaagctctatgaccgacattcggccagccagcacttccaaaag
cctcgcatgtccaatacggccttcatcgtcatccactttgctgacaaggtggagtacctc
tcggacggcttcctggagaagaacagagacacggtacatgaggagcagatcaacatcctg
aaggccagcaagttcccacttgtggccgacttgttccatgatgacaaggaccctgttcct
gccaccactcccaccgggaagggttcatccaacaaaatcaatgttcggtcggccagacct
cccttgaaggcctccaacaaggaacataagaaaaccgtgggccaccagttccgcacatct
ctgcagctgctcatggagaccctgaacgccacgaccccacattacgtccgctgcatcaag
cccaatgacgagaagctccccttccactttgaccccaagagagcagtacagcagctgcga
gcgtgcggagtgctggagacaatccgcatcagtgcagccggctacccatccaggtggacc
taccatgatttcttcaaccgataccgggttctggtgaagaagagggagctggccaacact
gacaagaaagccatctgtaggtcggtcctggagagcgtcctcaaggaccctgacaagttc
cagtttggccgcaccaaaatcttcttccgggcaggccaggtggcttacctggagaagttg
cgggcagacaagttccgggcagccaccatcatgatccagaagaccgtgcggggctggctg
caaagggtgaggtaccgccggctgcggagggccaccatgacgctgcagcgctactgccga
gggcacctcgcccgcaggttggctgagcatctgcgaaggacccgggcagcagtggtgctc
cagaagcaataccgcatgcacagggcccgcctggcctacctgcgtgtccgcaaggctgct
gtggtcatccaggcctttgtccgtggcatgtttgtgcggagaaactaccagaaggtcctg
gcagagcacaaagccaccatcatccaaaagcatgtgcgtggctggatggctcgcaagcac
ttccagcagctccggggtgcggctgtggtcatccagtgtgcctttcggatgctcaaggcc
aagcaggcactgaaggccctcaagatagaggcccgctcggctgagcacctgaagcgcctc
aacgtggggatggagaacaaggtggtgcagctgcagcgcaagatagatgaccagaataaa
gagttcaagatgttgtcggagcagctgtcgacagccacctccacacactccatggaagtg
gcaaggctgaagaaggagttggcccactaccagcagagccgtgaggaagacagcagtccc
cggctacaggaggagctggacaacctgcaggcagagctggacagggcacagtcagagcgc
aaggtcctggaggacacgcatgcccgggagaacagcgagctgagaaagcgcgtggctgag
ctggagcaggaaaatgcgctgctgaaagacgagaaagagcaactcaaccagcaaatccag
cgccactcgaaagatgagtctgcccggagctctgcccagggcgaggcactggtagtgaag
aaggagctggaggaggaacggtcccgctaccagaaccttgttaaggaatactcgcggctg
gagcagagatatgataacttgcgggacgagcaaaccccaggccatcggcggaatccatct
aaccagagcagcttagaatctgactccaataatccatccatctccatgtccgaggttggt
gacacagaggatgccctccagcaggtggaggacactggcctggagaaggcagccatggac
ctgacagttttcctgaagctgcagaagagggtccgggagttggagcaggagcggaagaag
ctgcaggtgcagctagagaagcgagatcagcaggacagcaagaaaggccagatggagcca
gtgaagaatgaggtggacttggcccaggatgaggatctggcctacaacagtctgaagaga
caagagctggagtcagagaacaagaagctgaagaacgacctgaacgagctgaggaaagcc
atggccgaccatgctatgcaggctagctcgccctacggctccacagatggctacagcctg
ctgctggaccagctccggctggccaacgaggagcttgaggtgcgcaaggaggaggtgctc
atcctgaggacacagatcgtcagtagtgaccagcgccgtcatgctggcaggagcacggac
attaatgccaggacaagttggcccaacagtgagaagcacgtggatcaggaagatgccatc
gaggcctatcatggagtctgccagactaacaggttgctggaggcacagctgcaagcccag
agcagagagcacgagcagaaagtggagcagctgcaagcacaggtggaggcactgcgggag
gagctggaccggcagcagcagacctttgcccagacccttcttctctccccggaggcccag
gtggagtttggcgtccagcaggagatctctcggctgaccaacgagaacctggacctgaaa
gaagtggtggaaaaactggagaagaacgagaggaagctcaagaaacagctcaagatttac
atgaagaaagtacaggacctggaagctacccaggcactggcccagagtgaccagaggcgg
caggaacttcacaggcaggtgacagtgcagcggaaggagaaggacttccagggcatgctg
gaatatcaccaggaggacgaggccctgctcattcgcagcctggtcacagatctgaagcca
caggcgttggtgggtgctgtaccctgcctgcccgcctacatcctgtacatgtgcatccgg
cacgcagactatgtcaacgacgacgtcaaggtgcactccctgctcaccgccaccatcaat
ggcatcaagcgggtactcaagaagcacagtgatgactttgagatgacatccttctggctg
gccaacacctgccgcctcctgcattgcctgaagcagtacagcggggatgagggcttcatg
actcagaacacagccaagcagaacgagcactgcctcaagaactttgatctcaccgagtac
cgccaagtgctgagcgacctgtccattcagatctaccagcagctcatcaagatcgcagag
ggtgtgctgcagcccatgatcgtgtcagccatgctggagaatgagagtatccagggcctg
tcaggggtgaagcccacgggctaccgcaatcgcagctccagcatggtagacggcgagaac
acgtactgcttggaggccgtggtacggcaactgaacaccttccatatggtcatgggtgac
cagggcctcgatcctgagattgtcctgcaggtgtttaagcagctcttctacatgatcaat
gccgtaaccctcaacaacctcctgctccggaaggatgtgtgctcctggagcacaggcatg
cagctcaggtacaacataagtcagctggaggagtggcttcggggaaggaaccttcagcag
agcggggcagcccagaccatggagcccctcattcaggcagcccagcttctgcagctgaag
aagaagacccctgaggatgctgaggccatttgctccctgtgcacggccctcagcacccag
cagattgtcaagattttaaacctttatacacctctgaatgaatttgaagaaagggtaaca
gtggcctttatacgaacaatccaggcgcagctacaagagcggaatgaccctcagcagtta
ctgctagacttcaagcatatgtttcctgttttgtttcccttcaatccatcttctctgacc
atggactccatccacatcccggccagcctcaatctggagttcctcagtgaggtgtga
DBGET
integrated database retrieval system
