Suncus etruscus (white-toothed pygmy shrew): 126020177
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Entry
126020177 CDS
T09902
Symbol
RNF17
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126020177 (RNF17)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
126020177 (RNF17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
SNase
Spectrin
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
126020177
NCBI-ProteinID:
XP_049637597
LinkDB
All DBs
Position
10:complement(50927608..51108320)
Genome browser
AA seq
1631 aa
AA seq
DB search
MAARKSAASQFALASCRQMRRQSRPWGTVELQCTRCGRKLAGASGNHHKLQCGHIFCEMC
LLITEECSTIMCPECAVATTINMRQSYYTVDGYNQEDSLMEKSQPKKIKNYSWDFKKTAD
QLTGGLEHSVSTRRNKLNLSTVMVETKATEEIDEALKIAGNNIEQLSTAIKMLEHIHSKA
KEETANIIEVMEKQFDQLFTSLDSRKKNLCEEVVRKTDDYLSNVVMAKSYIEEKKHDLDA
AMKIANELKLAPSLQTYCDLKQIIQTLKLTFESELSQVSSLKQRSSPRFNMNCNEMICIL
NSIGKIEFEDSTKYDPQEKKTRQKAQKKNNSKKEFSSQDTYPSLQKKKFDLSVLTDKTAS
SPLQRESNNVLLDVKILQPSKEVVSATSPKIVGVLPQMGSSPDVIIEEIIEENVESSPEL
VFVSHVIHPCHFYVRKYSQINDVTILEKKVNHFCCKSLHLDPSDTLELGTRIFVKSIENR
KWCRGIITKLIPKESEDTRKPGGPTKFSVCEIALIQIFMVDIGNSEVLIVSRVGDTHVKS
EHIAENHIVLNDLCLILRKSDPYIESLLKDIPPLAQQCSLKDIVPQNSDEGWGEEARVEF
LKMVNNKTVLMKSFREEDGVLIVDLQKPPTNKISSDMPVSLTDALVFLELARFRSQSPRS
HSENNRTLCYHPPILPKETTSVSVMVCYINSPSDFYLQLIESLDFLSLLKTIEEFYKSED
GENLEILCPVQDQACVAKFEDGVWYRAKVIGLPGHREVEVKYVDFGNTAKITLKEMRKIK
DEFLKPPEKAIKCKLAYIEPCKRIKKWPQKAKEKFEEKTQDKFMTCSIIKILEDNVLLVE
LFDSSDVSEMTPTSINDQLVKEGLASYEVGYTLKNDSKKDIEVWDPSPEEIISSEANNLN
PVSAKSLPNENLQSLYNKELPVHICNVISPEKIYVQWLFTENLLQSLEEKMVAAYENSKW
EPIKWENDMYCAVKIPDKNQWRRGQIIRIITDTLVEVLLYDMGMELIVNTSYLRELQENL
KTFGRLSMECSLVDIRPTGGSDKWTATACDCLSLYLTGAEATIILQENNTLWPLPVKIFC
KDEKGERVDVSKYLVKKGLALKETRIKLEKSHLLSKKYLQFPLEQEGSMITKGTKIKLYH
DIKDTVNFSKHKVSEVKEKIVSEVKEKILAPRNTGCYQPPIIPNMKVFDATVSCIGDDGT
IFVVPKLSEFELLKMTNDIQNSLKCLGLLEPYFWKKGEACAVRGSDTIWYRGKVIEVVGG
TIRVQYLDHGFTEKIPQCHLYPILLYPDTPQFCIPCQLHKTVPVGNVWQPDAVELLQELL
SKREVEIHIMELPENPWGKLSVHINFDGMSLSYFMANHKHCTFENSEEFPKEKPTNYNKK
YEEERWEIKSEELLLSETETPILPPYVSSSLPPPEELFAVRVKHVISPNEMYICPDSVEN
CNIFNQHSNSDVNADYNGVNWESGSENLNEALQRLNKKVETFPPLTDFKQEMPCLAEYDD
GIWYRAKIISIKEFNPLTILVQFVDYGTTGKLTVNRLRQIPLCLMKYPTQAIKVLLAGFK
PPSRDSGKSRIPYCPKWSMEALWAMIECIQGKQLYASSMAQAPEQVITLYEDEHYPVHMS
LIKMGLADQDD
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcgaaagtcagcggcgtcgcagttcgctctggcttcctgccggcagatgcgg
cggcagagtcggccctgggggacggttgagcttcagtgcactcggtgtggaagaaagttg
gccggcgcttcaggtaatcaccacaaacttcagtgtggacatatattttgtgaaatgtgt
ttattaataactgaagaatgcagcacaattatgtgccctgaatgtgcggttgctacaact
ataaatatgaggcaaagctactacacagttgatggatataatcaagaagattctcttatg
gaaaaatcgcaacctaagaaaataaagaattattcttgggactttaaaaagactgctgat
cagctaaccggtggtttagaacattcagtctccacacgcaggaataaattgaatctatca
actgtaatggtggaaaccaaagctacagaagaaatagatgaagcattgaaaatagcagga
aataatatcgaacaattaagtacagctataaaaatgcttgaacacatacacagtaaagca
aaagaagagacagccaatattatagaggttatggagaaacagtttgatcagctttttact
tctcttgattccaggaaaaagaacctgtgtgaagaggtagtaagaaaaacagatgattac
ttatcaaatgtagtgatggccaaaagctacattgaagagaaaaaacatgacttggatgca
gctatgaagatagcaaatgaattaaaattggcaccttctctacagacatattgtgaccta
aaacagattatccaaactttgaagttaacatttgagagtgaattgtcacaagtttcctct
ctaaagcaacgaagctctcccaggtttaatatgaattgcaatgagatgatctgtatactc
aacagtataggaaagattgaatttgaggattcaacgaaatatgatccccaagaaaagaaa
actagacagaaggctcaaaaaaaaaataacagtaaaaaggaattttcttctcaggataca
tacccatcactacagaagaaaaagtttgacctgtcagtcctaactgacaaaacagcatca
tctcctttgcaaagggaaagtaataatgtgcttttagatgtaaaaatattacagccatct
aaagaagtggtttcagctacatcccctaaaattgttggtgttcttcctcaaatgggctcc
agtcctgatgtgataattgaggaaattattgaagaaaacgtggaaagttctcctgagcta
gtttttgtaagccatgtgatacatccttgccacttctatgttcggaagtattcacaaata
aatgatgttacaatactggaaaagaaggtgaatcatttttgttgtaaaagtctacacctt
gatccttcagacactttggagctaggtacaagaatatttgtgaaaagtattgaaaataga
aaatggtgtcgaggaattattactaaattaattccaaaagaaagtgaagatactagaaaa
cctggtggtccaaccaaattctcagtctgtgaaattgcactaatacaaatattcatggta
gatattggaaattctgaagtcctaattgtttcaagagttggtgatacccatgtgaaatca
gaacacattgctgagaatcatatagtattaaatgacttatgtctaattctaaggaagtct
gatccatatatcgaaagtttattgaaagacatcccgccattagcacagcaatgctcgctg
aaagacattgttccacagaattcagatgaaggctggggagaagaagcaagagtagaattt
ttgaaaatggtaaataataagactgttttaatgaaaagttttagggaagaagatggtgtt
cttattgtagacctgcagaaaccaccaacaaacaaaataagcagtgatatgccagtgtct
cttactgatgcattagtttttctggaactagctcggtttcggtcacagtcaccaagaagt
cactctgaaaataataggacattatgctatcatccacctattttgcctaaagaaacgaca
tctgtttcagtcatggtttgttacataaatagtcctagtgatttctatcttcagttgata
gaaagcctggattttttatccttattaaagacaattgaggaattctataaaagtgaggat
ggggaaaatctggaaatcctttgtccagttcaagatcaagcctgtgtagctaaatttgaa
gatggagtttggtatcgggcaaaagttattggattgcctggacatcgggaagttgaagtt
aaatatgtagactttggtaatactgcaaaaataactcttaaagaaatgcgtaaaatcaag
gatgagtttctaaagcccccagagaaggcaattaaatgtaagctggcctatattgaacca
tgtaaaaggataaaaaagtggccccaaaaagctaaagaaaaatttgaagagaagactcaa
gacaaatttatgacctgttcaatcattaaaattttggaagataatgtacttttagttgag
ctttttgattcttctgatgtttctgaaatgactcctactagtattaatgaccagttagtc
aaagaaggcctagcatcttatgaagtaggatataccctgaaaaatgattctaaaaaggat
attgaagtgtgggatccttctccagaagaaattatttctagtgaagcaaacaacttaaat
cctgtatctgcaaaatctctccctaatgagaatctccaatctctttataataaggaactg
cctgtgcatatctgtaatgtaatatctcctgagaagatttatgttcagtggttattcaca
gaaaatttattgcagagtttagaagaaaagatggtagctgcttatgaaaactcaaaatgg
gaacccattaaatgggaaaatgatatgtactgtgctgttaaaatcccagataaaaatcag
tggcgaagaggtcagataatcagaataatcacagacacgttggtagaggtcttgctgtat
gacatgggtatggaactaatagtgaatactagctatctaagagaacttcaggaaaaccta
aagacatttggaagattatcaatggaatgctctcttgttgatataagaccaactggtggg
agtgacaagtggacagcaacagcttgtgactgtctttcattgtacttaactggagcagaa
gcgactatcatcttacaggaaaacaacacattgtggccattacctgtgaaaattttctgt
aaagatgagaaaggagagcgtgttgatgtttctaagtatttggttaagaaaggtttggct
ttgaaagaaacaagaattaagttagagaaaagccatctattatctaagaagtatttgcaa
tttcctctagaacaagaaggttcaatgattactaaaggaactaaaattaaactttaccat
gacataaaagatactgttaatttcagcaagcacaaagtttctgaagttaaagagaaaatt
gtatcagaagttaaagagaaaatcctcgcgccaagaaacactggatgctatcaaccacca
ataatccctaatatgaaagtatttgatgcaacagtaagttgcattggtgatgatgggact
atatttgtagtaccaaaattgtcagaatttgagctactaaaaatgacgaatgatattcag
aatagtttgaaatgcctgggtcttttggagccctatttctggaaaaagggagaagcctgt
gcagtaagaggatcagatactatctggtatcgaggcaaggtgatagaagttgttggtggc
actatcagggtacaatatttagaccatggattcactgagaagattccacagtgtcatctg
taccctattttgctatatcctgatacaccccagttttgtattccttgtcagctccataaa
actgtacctgttgggaatgtgtggcagccagatgccgtagaacttctacaggaactgctt
tcaaagagagaagtggaaattcatatcatggaattgcctgaaaatccctgggggaaatta
tctgttcatatcaattttgatggaatgtcactttcttattttatggcaaatcataaacat
tgtacatttgaaaattcggaggagtttccaaaagaaaaaccaacaaattacaataaaaag
tatgaggaggaaagatgggaaataaagtctgaggaattgctcctatctgaaacagagact
cctatattgccaccatatgtatcttcatctctgcctcccccagaagaactctttgctgtt
cgggttaagcatgtcatctcacctaatgaaatgtatatttgccctgattctgtggaaaat
tgtaatatatttaatcagcatagtaactcagatgtcaatgcagattataatggagtaaac
tgggaatctgggtctgagaaccttaatgaagcactacaaagacttaataagaaggtggag
acatttcctcctctgacagattttaaacaagaaatgccttgccttgcagagtatgatgat
ggtatatggtatagagcaaaaatcatttccattaaagaatttaatcctctaactatcctg
gtacaatttgttgattatggaacaactggaaagctgacagtaaacagattacgtcaaatt
cctctttgccttatgaagtatccaacccaagccataaaggttctcttggcagggtttaaa
cctccctcaagagattcaggaaagtcaagaataccatattgtcccaaatggagcatggaa
gcattgtgggctatgatagagtgcattcaaggaaaacaactttatgcttcctccatggct
caggcaccagaacaagtaatcacgttatatgaagatgaacattatccagttcatatgtca
ttaataaaaatggggcttgcagatcaagatgactga
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integrated database retrieval system
