Suncus etruscus (white-toothed pygmy shrew): 126020284
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Entry
126020284 CDS
T09902
Symbol
HOXA10
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-A10
KO
K17443
homrobox protein Hox-A10
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
126020284 (HOXA10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126020284 (HOXA10)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
126020284 (HOXA10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
126020284
NCBI-ProteinID:
XP_049637681
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Position
10:complement(100357989..100365923)
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AA seq
783 aa
AA seq
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MSARKGYLLPSPNYPTTMSCSESPAANSFLVESLISSGRGEAGGGGGGAGGGAGGGGGSY
YAHGGVYLPPAADLPYGLQSCGLFPALGGKRNEAAASPGGGGGGGGGGGLGPGAQGYAPA
PLDLWLDAPRSCRMEPPDGXPPPPPPPPPQRPPAATACAFAQNIKEESSYCLYDSTDKCP
KASAGADLAPFPRGPPPDGCALGSSGGVPVPGYFRLSQAYGTAKGYGGGGGGGAQPLGAG
PFPAQPPGRGFDPQPALASGSAEDARKERALDSPPPPTLPCAGGSGGSQGDEEAHASSSA
AEELSPAPSESSKASPDKDSLGNSKGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFN
MYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIRELTANFNFPDEAPGTPP
VPERPSFHIRHLAGHYICAGLDALRGATRFLHAGGGCRQGEGARERAPRRADREPSSGRF
LSSRSSSRAAAARSRLSALRDAGKAACAEFLSLVPRCLPCRGRGFARRDALTEWQAGSRS
GAGPGPGPGPGAARSAPGFCSAASAKVAAQWRRRQAAAAAAVEIVCRYGQVSCAQADQGG
VVGILGPGPFKAQPGELSRSSDKASVTITTRWRWPFVLGRPGGGGLSPVKGEMQSCSHSD
IGVLRNSTAEDKGPKDLETPRLPPARPALPGPGLEPLLPDLGPPGLRGVVGQRRGGGAAL
GPHDVSGKGRRAARSPEELSTGPDGAELLSLWCRAFPPLASQGLRGSRDSELSVQIDPGF
LGA
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccagaaagggctatctgctgccttcgccaaattatcccacaacaatgtcatgc
tcggagagccccgccgcgaactcctttctggtcgaatcgcttatcagctccggcagaggc
gaggctggcggcggcggcggcggcgcggggggcggcgcggggggcggcggcggcagctac
tatgcgcacggcggggtctacctgccgccggccgccgacctgccctacgggctgcagagc
tgcgggctcttccccgcgctgggcggcaagcgcaacgaggcggccgcatcgccgggcggc
ggcggcggcggcgggggcggcgggggcctggggcccggggcgcagggctatgcgcccgcg
cccctagacctgtggctggacgcgccccgatcgtgccgcatggagccgccggacgggnng
ccgccgccgcccccgccgccgccgccgcagcgcccgcccgcagccaccgcgtgcgccttc
gcgcagaacatcaaggaggagagctcgtactgcctctacgactcgacggacaagtgcccc
aaagcctcggccggcgccgacctggcccccttcccgcggggcccgccgcccgacggctgc
gccctgggcagctccggcggggtcccggtgcccggctactttcgcctctcgcaggcctac
ggcacggccaagggctacggcggcggcggcggcggcggcgcgcagccgctcggcgccggc
ccgttccccgcgcagcccccgggacgcggcttcgacccgcagcccgcgctcgcctccggc
tcggccgaggacgcccgcaaggagcgagccctcgactcgccgccgccccccacgctgccc
tgcgccggtggcagcggcggctcgcagggagacgaggaggcgcacgcgtcgtcctcggcg
gccgaggagctctccccggccccgtccgagagcagcaaagcctcgcccgataaggactcc
ctgggcaattctaaaggcgaaaacgctgccaactggctcacggcaaagagcggccggaag
aagcgctgcccctataccaagcaccagacactggagctggagaaggaatttctgttcaac
atgtaccttactcgcgagcggcgcctagagatcagccgcagcgtccacctcacggacaga
caagttaaaatctggtttcagaatcggaggatgaaactgaagaaaatgaaccgggagaat
aggatccgggagcttacagccaactttaattttcctgatgaagctccaggaactccacct
gtgcccgagcgtccctccttccacattcgccatctcgctggccattacatctgtgcaggg
ctggacgccctccgcggggccacgcgtttcctgcacgcggggggggggtgccggcaaggg
gagggggcgcgggagcgcgcgccccggcgggctgaccgggagcccagttcggggcgcttc
ctgagctcccgcagcagctcccgggccgcggcagctcggagccggctctccgcgctgcgg
gacgcggggaaggcagcgtgcgccgagttcctctcgctggtgccccgctgtttaccttgc
cggggccggggctttgcccgccgggatgccctaacggaatggcaggcggggtcgcggagt
ggcgcggggccggggccggggccggggccgggcgcggcgcggtctgctccggggttttgc
tccgcggcgtcggcgaaggtggcggcgcagtggcggcggcggcaagcggcggcggcggcg
gcggttgaaatcgtctgcaggtacggtcaggttagctgcgcccaagcggaccaggggggc
gtggtaggaattctgggccccgggccattcaaggcccagcctggcgagctgagtcgcagc
tcagacaaggcctcggttacgatcacgaccaggtggcggtggcctttcgtgctgggtcga
ccaggtggcggtggcctttcgcctgtgaaaggggagatgcagtcctgctctcattctgac
attggggttctccgcaactccactgctgaggataaaggcccaaaagacctggaaaccccg
agactgccgcccgctcgccccgcactgccaggccctggccttgagccgctgctgccggat
ctgggccctcctggtctccgcggagtggtcggacagagacggggggggggggccgcgctg
ggaccccacgacgtgtcgggcaaaggcaggcgggcggccaggagccccgaagaactctca
actgggcccgatggcgccgagctgctgtcgctctggtgcagggccttcccgccgctagca
tcccagggcctccggggctcgcgggacagtgaactcagcgtccagatagacccgggcttc
cttggtgcctag
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