Suncus etruscus (white-toothed pygmy shrew): 126020346
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Entry
126020346 CDS
T09902
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126020346 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126020346 (ARFGEF1)
Membrane trafficking [BR:
setr04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
126020346 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
CheX
Motif
Other DBs
NCBI-GeneID:
126020346
NCBI-ProteinID:
XP_049637753
LinkDB
All DBs
Position
10:28676986..28803848
Genome browser
AA seq
1849 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVRKAHHSQLRKACEVALEEIKAETEKQSPPHGETKA
GSGTLPPVKSKTNFIEADKYFLPFELACQSRCPRIVSTSLDCLQKLIAYGHLTGNAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQQHLLQSPVSHHE
PESPQLRYLPPQTVDNIPQEHEGDLGPHTNDVNKSLQDDIEHENGSDISSAENEQTEADQ
ATAAETLSKHDILYDGENHDCEEKPQDIVQSIVEEMVNIIVGDMGERTTINSSADGNIGS
IEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQ
KDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINA
IKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTS
SFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGM
SNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQETSEIKHPETIN
RYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYL
QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSA
LRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHS
PQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISLKETKELTIPTKSSKQS
VASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAF
SVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQ
KNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSL
TGTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAI
VDFVRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGC
NPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCI
AQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFERHFPATIDSF
QDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDINVAPEDRVWVR
GWFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKL
PEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSG
TNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPASRETVPPPLSPMNEK
QLDTISQKSVDIHDSIQPRSADSRQQAPLASVSAMNEEVSKIKPAAKFPEQKLFAALLIK
CVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDSVDFDVRVDTQDQGMYRFLTSQQLF
KLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMD
ESRVSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHA
SFYYPLLCEIMQFDLIPELRAVLRRFFLRIGVVFQISQLPEQDLGVNKQ
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagggcaagaagaccaagaacatgttcctcacgcgcgccctggagaagatcctg
gccgacaaggaagtgaggaaggcgcatcactcccagctgcgcaaggcgtgcgaggtggcg
ctagaggaaataaaagctgaaactgaaaaacagagccctcctcatggagaaacaaaagct
ggatcaggcactctcccaccagtgaaatcaaagacaaattttattgaagcagacaagtac
ttcttaccttttgaactggcatgccagtccagatgcccccgcatagttagcacttctcta
gattgtttacagaaacttattgcttatggacacctgactggcaatgctccagatagtaca
acaccaggcaaaaaattaattgatagaattattgaaacaatttgtggctgtttccaaggt
cctcaaacagatgaaggtgttcagttacagataataaaggctttacttactgcagttaca
tctcaacacatagaaatccatgaaggaacagtactgcaagctgtgagaacatgttacaat
atctatctagcaagcaaaaatttaatcaatcaaacaacagccaaagctactcttactcag
atgctaaatgttatttttgctcgcatggaaaaccaagcattgcaggaagccaaacaaatg
gaaaaagaacgtcatcgacagcagcagcatctgttgcaatctccagtaagccatcatgag
cctgaatcacctcaacttagatatttgccacctcagactgttgataatataccccaagaa
catgaaggggaccttggcccccatacaaatgatgtgaataaaagccttcaggatgatata
gaacatgaaaatggatctgatatttccagtgcagaaaatgaacagactgaagctgatcag
gcaacagcagctgaaacactatctaaacatgatatattgtatgatggagaaaaccatgac
tgtgaggaaaagccacaagacattgtacagagcattgtagaagaaatggtgaacatcatc
gttggagatatgggagaaaggacaactataaattcaagtgcagatggcaacattggatct
atagaagatggtagtgacagtgaaaatattcaagcaaatggaattccaggaacaccaatt
tctgttgcatatacaccgtccttacctgatgacagattgtctgtctcttccaatgatact
caggaatctggaaattcttcaggaccttcacctggtgctaagttttcccacattttacaa
aaggatgcctttctagtattcaggtcattgtgtaaactgtcaatgaaaccactgtcagat
ggtccaccggatccgaagtctcatgagttacgatccaagattctttcattgcagttactt
ctatccattctgcagaatgcaggacctgttttcaggacaaatgagatgtttattaatgct
attaagcagtatctatgtgttgcactgtcaaaaaatggagtctcatctgttccagaggtt
tttgagctttccctttccatatttcttactttattgtcaaatttcaagacacatctgaag
atgcagattgaggtgttctttaaggaaattttcttatatattttggaaacttctaccagt
tcatttgaccataaatggatggttatacagacattgacaaggatttgtgcagatgctcag
agtgttgtagatatttatgtaaattatgattgtgacttaaatgcagcaaatatatttgaa
agactagtgaatgatctttcaaaaattgcccaaggacggggtagtcaagaattgggtatg
agtaatgttcaggaattgagcctacggaaaaaaggattggaatgtttagtgtccattttg
aaatgtatggttgaatggagcaaggatcagtatgtgaatcctaactctcagacaactctt
ggtcaagaaaagccctcagagcaagagacaagtgaaatcaaacaccctgagacaataaac
cgatatggaagtttaaattctctggagtcaacatcatcatcaggaataggcagctatagt
acacagatgtctggtactgataatccagaacaatttgaagttctgaagcaacaaaaagaa
attatagaacaagggatagatttatttaataagaagccaaagagaggaatacagtacctc
caggaacaaggaatgcttggtaccactcctgaagatatcgcccagtttttacatcaagag
gaaagattagactctacgcaagtaggtgaattcctgggagataatgacaaatttaataaa
gaagtcatgtatgcatatgtggaccaacatgacttttcaggaaaggactttgtttcagcc
cttcgcatgtttttggaaggattccggcttccaggagaagctcaaaaaattgatcgatta
atggaaaaatttgctgcgagatacctggaatgcaaccaagggcaaaccctttttgctagt
gcagatactgcttatgttttggcttactcaattataatgctgaccacagatcttcacagt
ccacaggttaaaaataaaatgacaaaggagcagtacattaagatgaacagaggtatcaat
gatagtaaagatcttcctgaagagtatctatctgccatttataatgaaatagctggaaaa
aagatatcattgaaagaaacaaaagaattaacaatccctaccaaatcaagtaaacaaagt
gtagccagtgaaaaacaaagaagacttctttataatttagaaatggaacagatggccaag
acagctaaagcacttatggaggctgtgagccatgttcaggcaccttttacaagtgcaaca
catttagagcatgtaagacccatgtttaagctggcttggacaccttttctggctgcattc
agtgtaggtctacaagactgcgatgatactgaagtagcttctctttgcctggaaggtata
agatgtgcaatcagaattgcatgcattttcagcattcagctggaaagagatgcctatgtg
caggcacttgcaagattcactttacttacagtgagttctggcattactgaaatgaaacag
aaaaacatcgatacaataaaaacactcatcacggtggcacatacagatggaaattattta
ggaaattcgtggcatgagattctgaagtgcatcagtcagttggagcttgcacagcttata
ggaacaggagtaaaaccacgatatatttctggaacagtaagaggtagagaaggatctctt
actggaacaaaagatcaggctcctgatgaatttgtgggcctgggactagttggaggaaat
gtggactggaagcagatagcaagtattcaggagtccattggagaaaccagttctcagagt
gttgttgttgctgtagatagaatatttacaggatctacaagactagatggaaatgctatt
gtggattttgttcgttggctctgtgctgtgtctatggatgaattgctttctactacacat
ccaagaatgtttagtctacaaaaaatagtagaaatatcatattacaacatgggaagaata
agactgcaatggtcccgaatttgggaagttattggagatcattttaataaggttggctgt
aatcctaatgaagatgtcgctatttttgcagtagactccttgaggcaattgtcaatgaag
tttttagagaaaggggaacttgctaatttcagattccagaaggattttttaagaccattt
gaacatataatgaaacggaacaggtctccaacaattcgagatatggttgtacgatgtata
gcacagatggttaattctcaagctgcaaacatacggtctggatggaagaacattttctct
gtgtttcatctagctgcatctgatcaagatgaaagtatagtggaacttgcattccaaaca
acagggcacattgtcactcttgtgtttgaaagacatttcccagccaccattgattcgttc
caggatgcagtaaagtgtttgtctgaatttgcatgcaatgcagcttttccagacacaagt
atggaagcaattcgattaattcgccattgtgcaaaatatgtatctgatagacctcaggcc
ttcaaggaatatacaagcgatgacataaatgtggcacctgaagacagggtgtgggtgaga
ggatggttcccaattctctttgagttgtcctgtatcatcaatagatgcaaattagatgta
agaaccaggggattaacagtaatgtttgaaataatgaaaacttacggtcacacttatgag
aagcattggtggcaggacttgtttagaatcgttttcagaatttttgacaatatgaaattg
ccagaacagcaaactgagaaagctgaatggatgacaaccacttgtaatcatgcactctat
gcaatctgtgatgtattcacccagtatttagaagtactcagtgatgtacttttggatgat
atttttgcgcagctttattggtgtgtgcagcaagacaatgaacagttagcacgatctggt
acaaactgcttagagaatgttgttatcctgaatggagaaaaattcaccctagaaatatgg
gataaaacttgtaattgcacactggatatcttcaaaaccacaattcctcatgctcttttg
acttggcgacccgcttctagagaaactgttcccccacctctgtctcctatgaatgaaaag
caattggatacaatatcacagaaatctgtagatatccatgattctattcagccaagatct
gcagatagtagacagcaagcaccattggcttctgtctctgctatgaatgaagaagtcagc
aaaattaaacctgcagcaaaatttcccgaacaaaaattgtttgccgccctgttgattaaa
tgtgttgtgcagctggaactcatccagactatcgacaacattgtgttcttcccagccaca
agtaagaaggaagatgcagaaaacttagctgcagcacagagagattctgtggattttgat
gttcgagttgatactcaagaccaaggaatgtaccgctttctaacttcacaacaacttttt
aagctgctggattgcttattagaatcacatagatttgcaaaagcatttaattccaataat
gaacagagaactgctctgtggaaagcaggcttcaaaggcaaatccaaacccaatcttctg
aagcaggagaccagcagcttggcatgtgggctgcgcattcttttccggatgtacatggat
gaaagccgggttagtgcctgggaagaggtccagcagaggcttctaaatgtctgcagtgag
gcactaagttacttccttactctgacatctgaaagccatcgggaagcttggaccaattta
ctgcttttatttctaacgaaggttctaaagataagtgacaacaggttcaaagctcatgca
tcattctactaccctctcttatgtgaaatcatgcaatttgacttgattcctgaactgcgt
gctgttcttagaagattttttctgcgaattggagtagtttttcagatatcacaactaccc
gaacaggaccttggagtaaacaagcaatga
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integrated database retrieval system
