Suncus etruscus (white-toothed pygmy shrew): 126020350
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Entry
126020350 CDS
T09902
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126020350 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126020350 (VCPIP1)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126020350 (VCPIP1)
Peptidases and inhibitors [BR:
setr01002
]
Cysteine peptidases
Family C64
126020350 (VCPIP1)
Ubiquitin system [BR:
setr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
126020350 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
126020350
NCBI-ProteinID:
XP_049637756
LinkDB
All DBs
Position
10:29302635..29327979
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AA seq
1219 aa
AA seq
DB search
MSQPPPPPPPPPPPPPPPQAPQTPPPLAATTTAAPKRRDRRIFSGSCPDPKCQARLFFPA
SGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVMGL
SNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGYGK
DRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENL
KQHFQQHLDQYQALFHDFIDAAEWEDIISECDPLFVPPEGVPLGLRNIHIFGLANVLHRP
IILLDSLSGMRSSGDYSATFLPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLVGIK
GAELPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEVFM
DIHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLICGALSELHVPP
EWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLICSYDPMKDVLVPDYGLSNLTACNWCH
GSSVRRVRGDGSIVYMDGDRTNSRSTGGKCGCGFKHFWEGKEYDNLPEAFPITLEWSGRV
VRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNPDD
YTPVNIDGAHAQRVGDGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNVTEQA
SLMQKRKTEKLKQEQKSLPRTVSPSTLRDGPSSAPATPTKSLYSPTTSKEKKIRITTNDG
RQSMVTLKSSTTFYELQESIAREFNIPPYLQCIRYGFPPKELMPPPAGMEKEPVPLQHGD
RISIEIVKSKAEGSGGQSAAAHSVHTVKQEELAVASKLASKELQEQADKEMYSLCLLATL
MGEDVWSYAKGLPHMFQHGGVFYNIMKKTMGMVDGKHCTFPHLPGKTFVYNASEDRLELC
VDAAGHFPIGPDVEDLVKEALSQVRAEASTRSRESSPSHGLLKLGSGGVVKKKSEQLHNV
TAFQGKGHSLGTASSSPHLDPRARETTVVKKHNIGTDFSNSTIKTEPPAYTSAPSNSELI
RIAPGVVTMRDSRQLDPNLIEAQRKKLQEMVSSIQASMDKHLRDRSTEQSSSDLPQRKVD
ASSSVKPGSLQSGLPESFSLTGGTENLNTETTDSCVAEALGAAFATRSKAQRGNSVDEPE
EMDSQDAEMTNTTEPMDHS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgccgcctccgccgcctcctccacctcctccacctcctcctcaggct
cctcagacgcctccaccgttggcggcgacaacgacggctgccccgaagcgacgggaccgg
aggatcttctctgggagctgcccggaccccaagtgtcaggcccggctcttcttcccggcc
tcgggctccgtgagcatcgagtgcaccgaatgcggacaacggcacgagcagcagcaactg
ctcggggtggaggaggtcaccgacccggacgtggtgctgcacaacctgctgcggaacgcc
ctgctcggcgtcacgggagcccccaagaagaacacggaactggtgaaggtgatgggcctc
tccaactaccactgcaaactgctgtcgcccatcttagcccgctacgggatggacaagcag
accgggcgagccaagctcctccgagatatgaaccagggcgagctcttcgactgtgcgctg
ctgggcgaccgagccttcctcatcgaacccgagcatgtgaacacggtgggttacggcaag
gaccgctccgggagcctcctctatttgcacgacaccctggaggacatcaaaagggccaac
aaaagtcaagagtgcctgatcccggtgcatgtggacggggatgggcactgtctggtgcac
gccgtgtcccgggctctcgtgggccgcgagctcttctggcatgccctgagagagaacctc
aaacagcacttccagcagcacttggatcagtaccaagccctgttccacgacttcattgat
gctgccgagtgggaggacatcatcagtgagtgtgaccccctctttgtccctcccgagggt
gtccccttgggcctgaggaacatccatatatttggcctggccaatgtgttacatcgcccc
attattctcttagattccctcagtgggatgaggagctccggtgattattcagccactttt
ctgcccggacttatccctgcagagaagtgtaccgggaaagatggtcacttgaacaaaccc
atttgtattgcatggagcagctctggtaggaaccactatatccctctggtaggcatcaaa
ggggctgaattgcccaaattgccaatgaatttgcttcccaaagcgtggggtgtgcctcag
gacctgattaaaaagtatatcaaacttgaggaggatggtggctgtgtaattggaggagac
agaagtttgcaggataaatacttactgaggcttgttgctgctatggaagaagtctttatg
gacatacacggtattcatcctagtttggttgctgatgtccatcagtatttctacaggagg
actggagtgattggagttcagcctgaagaagtcacagcagctgctaaaaaagcagtcatg
gataatcgtcttcataagtgtttgatctgtggtgccctttctgaacttcatgttccccca
gagtggctggctccaggtgggaaactgtataacctcgcaaaaagcactcatggacagctg
agacctgacaaaaattacagctttcccttgaacaatttgatttgctcatatgatccaatg
aaagatgttctggtaccagactatgggttgagtaacctaacagcttgtaattggtgccat
ggctcatcagtgcgaagggtgagaggcgatgggtctattgtgtatatggatggcgacaga
actaactctaggtccactggtggcaaatgtggttgtggattcaagcatttttgggaaggt
aaagagtatgacaatctaccagaagcttttcctattactttggagtggagtggaagagtg
gtcagagaaacagtttactggttccagtatgaaagtgattcctctttgaatagtaatgtt
tatgacgttgcgatgaaacttgttaccaagcactttccaggtgaatttgggagtgaaatc
ctagttcaaaaagttgttcacactatattgcatcagactgccaaaaagaaccctgatgat
tatacccctgtaaatatagatggtgctcatgcccaaagagttggagatggacaagagtca
gaatctcagctcccaactaaaattattcttactggacagaaaacaaaaactttgcacaag
gaggagttaaatatgagtaaaaccgaaagaactattcaacagaatgttacagaacaggct
tctctaatgcagaaacggaaaacagagaagttaaaacaagaacaaaaaagcctgcccagg
actgtttctccaagtaccttgcgtgatggtccatcctctgcacctgctacccccaccaag
tctctctactcaccaacgacttcaaaggagaagaagatccgaataacaactaacgatggg
cggcagtccatggttacgctcaagtcttccacaaccttttatgaacttcaggaaagcata
gccagagaattcaacattcctccatatttacagtgtattcgatatggcttccctccaaaa
gagttaatgccacccccagcaggaatggaaaaagagccagtacctttacagcatggtgac
agaatttcgatagagattgtaaaaagtaaagcagaaggtagtggtggtcagtctgctgct
gcacactcagtccacactgtgaaacaagaagagcttgctgtcgctagtaaattggcatct
aaggaacttcaggagcaagctgacaaagaaatgtactccttgtgtcttttagcaacgtta
atgggggaagatgtatggtcttatgcaaaaggacttcctcacatgttccagcatggtggt
gtgttctacaatattatgaagaaaaccatgggtatggttgatggcaagcattgtactttt
cctcatctacctggcaaaacatttgtctataatgcttctgaagatagactggagttgtgt
gtggatgctgcaggacattttcccattggtcctgatgttgaagatttagttaaagaggct
ttgagtcaggttcgagcagaagcttctacaagaagtagggaatcaagtccctcgcatggg
ctattaaaactaggcagtggtggagtagtgaaaaagaaatctgaacaacttcataacgta
actgcctttcagggaaaggggcattctctaggaactgcatccagtagcccacaccttgat
ccaagagctagggaaacgacagttgtgaaaaagcataacatagggacagactttagtaac
agtactattaaaaccgaacctcctgcatacacatctgctcctagtaatagtgagctcatt
cgaatagctcctggagtagttacgatgagagacagcaggcagcttgatcctaacttgata
gaggcacagcgaaaaaagttgcaggaaatggtttcttctattcaggcttcaatggacaag
cacttacgggatcgaagtactgaacagtcatcgtctgatcttcctcaaaggaaagtagat
gccagctcttctgtgaagcctggaagtcttcagagtggtttgccggaatctttttcttta
actggtggcactgaaaatttgaatacagaaacaactgatagctgtgtggcagaagcgcta
ggagcagcatttgccacaagatcaaaagcacaaaggggaaattctgtggatgaacctgaa
gagatggatagtcaagatgctgagatgacaaacacaactgagccaatggatcattcttga
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integrated database retrieval system
