Suncus etruscus (white-toothed pygmy shrew): 126020359
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Entry
126020359 CDS
T09902
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126020359 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126020359 (TRIM55)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126020359 (TRIM55)
BRITE hierarchy
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
DNA_topoisoIV
Cbl_N
Motif
Other DBs
NCBI-GeneID:
126020359
NCBI-ProteinID:
XP_049637776
EnsemblRapid:
ENSSRTG00000019886
LinkDB
All DBs
Position
10:complement(29774864..29830884)
Genome browser
AA seq
544 aa
AA seq
DB search
MSSSLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSD
QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCEVAPLTHVFQRQKSELSDGIAILV
GSNDRVQGLISQLEDTCKAIEEYCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEK
LDHVRSLIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLQKISEASKAFQMEKI
EHGYENMSHFTVNLNREEKIIREIDFYREGEGEEGEEGGEGEESERGEEGEVVEIEEVEN
VRTESSGEDECPEETLEPTQLALDLQDGPGDLPVASSEPPIADALVTQGEVVPTGSQQTT
ESETSVPAATDSADPLFYPSWYKGQTRKATTNPPSTPGSEGLGHIGCPGSEDANVRKAEV
AEAAANERAAVSGKETSSPAATSQIGFENPSLQEQATALGSENGAESELSRHIFSFSWLN
SLNE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatctttgaattataagtcattttccaaagagcaacagactatggataatttg
gagaagcaactcatctgtcccatctgcttggagatgttcacaaaacctgtggtcattctt
ccctgtcagcataacctgtgtaggaaatgtgccagtgatattttccaggcctctaacccg
tatttacccacaagaggaggtacgactgtggcttcaggaggccggtttcgctgcccatcc
tgtagacacgaagtagttttggatcgacatgggatatatggacttcagagaaacctgctg
gtggaaaatattattgacatatataagcaggaatcaaccagaccagaaaagaagtcggac
cagcccatgtgtgaggaacatgaagaggaacgcattaatatctactgtctgaactgcgaa
gtgcccacttgctctctgtgcaaggtcttcggggcacacaaggattgcgaagtggctccc
ctcactcatgtgttccagagacagaagtctgagctcagcgatggcattgcaatccttgtg
gggagcaacgatcgggtacaaggcctgatcagccagctggaagatacctgtaaagccatt
gaggaatactgcagaaaacagaagcaggagctttgtgaaaagtttgattacctgtatggc
atcctggaggagaggaagaatgaaatgactcaagtcattactcgaacccaagaggaaaaa
ctggaccatgttcgttcactgatcaaaaagtattctgatcatttagagaatgtatcaaaa
ttggttgaatccggaatccagttcatggatgaaccagaaatggcagtgtttctacagaat
gctaaaactctgttgcaaaaaatttctgaagcatccaaggcatttcagatggagaaaata
gaacatggttatgaaaacatgagccacttcacagtcaacctcaatagagaagaaaaaata
atacgtgaaattgatttttacagagaaggagaaggggaagaaggagaggaaggaggagaa
ggagaagaaagtgaaagaggtgaagaaggagaagtagtagaaatagaagaggtagaaaat
gtacgaacggagtcctcaggagaagatgaatgtccagaggaaaccttggagcccactcaa
ctggccttggatcttcaggatggcccaggggatcttccagttgcctcctcagagccacct
attgcagatgccctggtgacgcagggggaggttgtgcctactggctctcagcagaccaca
gagtctgaaacttcagtcccggcagcaacggactctgcggatcccttgttttaccctagc
tggtataaaggccaaacccggaaagcaaccaccaatccaccttccaccccagggagtgaa
ggtctggggcacatagggtgtcccggttctgaggatgcgaatgtgcggaaggcagaagtg
gcagaagccgcagccaatgagagggcagcagtgagtggtaaggaaactagttcacctgca
gctacttctcagattggatttgaaaatccttccctccaagaacaagcaacagcattaggg
agtgaaaatggagctgaatctgagctttctcggcatatcttctccttttcctggttgaac
tccctgaatgaatga
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integrated database retrieval system
