Suncus etruscus (white-toothed pygmy shrew): 126020437
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Entry
126020437 CDS
T09902
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04140
Autophagy - animal
setr04211
Longevity regulating pathway
setr05010
Alzheimer disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126020437 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
126020437 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126020437 (RB1CC1)
05014 Amyotrophic lateral sclerosis
126020437 (RB1CC1)
05016 Huntington disease
126020437 (RB1CC1)
05017 Spinocerebellar ataxia
126020437 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
126020437 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
setr01009
]
126020437 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126020437 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
setr03029
]
126020437 (RB1CC1)
Protein phosphatases and associated proteins [BR:
setr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126020437 (RB1CC1)
Membrane trafficking [BR:
setr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
126020437 (RB1CC1)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126020437 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
126020437
NCBI-ProteinID:
XP_049637861
LinkDB
All DBs
Position
10:complement(763277..838089)
Genome browser
AA seq
1593 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIYSKYKIAIQHQVLVVNGGECMAAERRVC
TYSAGTDTNPIFLFNKEMILCDRPPTIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFENIYSSYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLHSLPEQESSEKAELKTSTEL
VLSPDMPRTTNKSLLTSFHKSMEHVAQDTTDAECGKEIQESCQTVLQKDENVLDTKEGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPSSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASTSQTSPHSASSPRIENATG
ITTATSPKSPPPLTVQDPLCSTVCPLEELSPDSIDAHTFDFETIPHPNIEQTIRQASLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
VCGNESSGDHSSLNIQLEKCRVVAQDSHFSIKTIKEDLCHFRTFVQKEQCDFSNSLKCTA
VEIRNIIEKVKCSLEVTLNEKHQKELQSVKSEYEDKLETLVKESEENENKIKKLKGELVC
LEEVLQNKDNEFSLIKHEKEAVIYLQNEKEQKLLEMENIMHTQNCKINELKQSRELVLED
LKKAHVENDEKIQLLRAEFQSLEQSHLKELEDTLHVRHTQEFEKVITDHKVSLEELKKEN
KQRIDQIQESHATIIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAEADEIKILLEEN
KAQQKETLKSLLVQETENLRTEISKLNQKIEDNNENYQVGLEELRTLMTIEKDHCISELI
NRHEEESNMLKAELSKVTSLHHQAFEIEKKLKEEIMELQRKLDSELKALEKQKDEKMVQQ
EEKYEAIIRKLEKDKEGFVVSQEQDREQLIQKLTCEKEAAIQAALKEFKLEREAVEKELV
AKVKHLETQIAKSPAIESAGEDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKKLEEEVSKLRSSSLVPPSYGATAPELCGACAPELPCEAERLATEVADEGRIDSAMETS
MMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF
QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGATRRPWVLGKVME
KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtcaatactggaacgaccctaacatttgatactgaactt
acagtgcaaactgtggctgaccttaagcatgccatttatagcaaatacaaaattgctatt
caacaccaggtgctggtggtcaacggaggagagtgcatggccgctgaacgaagagtgtgc
acctacagtgcggggacggacacgaatccaatttttctctttaacaaagaaatgatctta
tgcgatcgtccacctactattcctaaaacaaccttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcacacagttgcttccagaacacag
cttgcagtggaaatgtatgaagttgccaagaaactttgctctttttgtgaaggtctggtc
catgatgaacatcttcagcatcaaggctgggctgccatcatggccaatctggaggattgt
tcaaattcataccaaaagctacttttcaaatttgaaaatatttattcaagttatctgcaa
tccatagaagacatcaagttaaaacttacccatttaggaactgcagtttcagtcatggcc
aagatcccactgctggagtgcctgaccaggcatagttacagggaatgtttgggaagactg
cattccttacccgaacaggaaagctcagaaaaagctgagttgaaaacctccactgaactg
gtgctctctcctgatatgcctagaacaacgaacaaatccttgttgacctcatttcacaag
tcaatggaacacgtagcccaggatacaacagatgctgaatgtgggaaagaaattcaggaa
tcttgccagactgttctccagaaggacgaaaacgtcctggatactaaagagggggatctg
cctttttttaatgtttctttgttagactggataaatgtacaagatagacccaatgatgtg
gagtctttggtcaggaagtgttttgattctatgagcaggctcgatccgaggattattcga
ccatttatagcagagtgccgtcaaactattgccaaacttgataatcagaatatgaaagct
atcaaagggcttgaggatcgcctgtatgccctggatcagatgatcgctagctgcagccgc
ctggtgaatgaacagaaagaacttgctcagggatttttagctaatcaaatgagagctgaa
aacttgaaagatgcatctgtgttaccggatttgtgcctgagtcatgcaaatcagttgatg
attatgttacagaatcatagaaaactcttggatattaaacagaagtgtaccactgccaaa
caagaactagctaataatctgcatgtcagattgaagtggtgttgctttgtaatgcttcac
gctgatcaggatggagaaaaactgcaggctttgcttcgcctagtcatagagctgctggaa
agagtcagaattgttgaagctttaagtacagttcctcaaatgtactgtttagctgttgtt
gaggttgtaaggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc
aaggatggaaagcgattatatgaagccgaaaagtcaaaaagggaatcttttggaaaatta
tttaggaaatctttcttaagaaatcgtttgtttaggggattggactcctggccttcatcc
ttttgtactcagaagccccgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagttcctgcaatcattttgtccttcagaagttcagccattcctcagggtcccttta
ctttgtgactttgaacctctacaccagcatgttcttgctctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaaaaggca
tccacgagtcaaacttccccacattcggcttcctctccccggatagaaaatgcgacagga
attacaactgctacctcaccaaaatctcctcctccactcactgttcaggatcctctgtgt
tctacagtatgtcccttagaagaattatctccagatagcatcgatgcacatacatttgat
tttgaaactatcccccacccaaacatagagcagacaattcgccaagcttcattagacttg
gattcattagcagagagccccgaatctgattttatgtctgcagtgaatgagtttgtaata
gaagaaaatttgtcatctcctaaccctataagtgatccacaaagtccagaaatgatggta
gaatcactttattcatcagttatcaatgcaatagacagtagacgtatgcaggatacaaat
gtgtgtggcaacgagtcgtcgggagaccattcttctctaaatattcagttagaaaagtgt
agagtggttgcccaagactctcacttcagcataaaaactattaaggaagacctttgtcac
ttcagaacatttgtgcaaaaggaacagtgtgacttttcaaactctttaaaatgcacagca
gttgaaatcaggaacattattgaaaaagtaaaatgctctctggaagtaacactaaatgaa
aaacatcaaaaagaactgcagtcggtaaagagtgaatatgaagataaacttgagacacta
gtaaaggagagcgaagaaaatgaaaacaaaataaaaaaattaaaaggagaattagtatgc
ctggaggaggttttacaaaataaagataatgagttttctttgattaaacatgaaaaggaa
gctgtcatctacttacagaatgaaaaggaacagaagttgttagaaatggaaaatataatg
catacccaaaattgtaaaattaatgaactgaaacagtcacgagagttggttttagaagac
ttaaagaaagctcatgttgaaaatgacgagaagattcagctgttgagggctgagtttcag
agcttagagcagagtcatctaaaggaattagaggacacgctgcatgtcaggcacactcag
gagtttgaaaaggtgattaccgaccacaaagtttctttggaggaattgaagaaggaaaat
aaacaaagaattgatcagatacaggagtctcatgccaccatcattcaggaaaaagaacaa
cagctccaggaattaaagctgaaggtgtcggatttgtcagatatgagatgcaaattagag
gttgaacttgcattaaaggaagcagaagctgatgaaattaaaatcctactggaagaaaac
aaagcacaacagaaggagaccttaaagtctctccttgtacaagagacagaaaatttgaga
acagaaataagtaaactcaatcagaagatagaggacaataatgagaattatcaggtgggt
ttggaagagttaagaactttgatgacaattgaaaaagatcattgcatttcagagttgatt
aatagacacgaagaagaatctaatatgctcaaagctgaattaagtaaagtaacatctctg
caccaccaagcatttgaaatagaaaagaaattgaaagaagaaataatggaactgcagaga
aaattggactcagaattgaaggctcttgaaaaacagaaagacgaaaaaatggttcagcaa
gaagagaagtatgaagctatcatccgaaaacttgagaaggacaaagagggatttgtcgtg
agccaggagcaagaccgagaacagttaattcagaagcttacttgtgaaaaagaagcagcc
attcaggctgccctaaaagaatttaagttggagagagaggctgttgagaaagaactagta
gcaaaagttaagcaccttgagactcaaatagcaaaaagtcctgcgattgagtctgccgga
gaagattcttcaagcttagtagctgaactacaagaaaagcttcaggaagaaaaggctaag
tttttagaacagcttgaagagcaggagaaaagaaagaatgaggaaatgcaaaatgtccgg
acatctttgattgcagaacagcagaccaattttaacactgttttaacaagagaaaaaatg
agaaaagaaaacataattaatgatcttagtgataaattgaaaagcacaatgcagcagcaa
gagcgagataaagatttgatagagtcgctgtcggaggaccgagctcgtttacttgaggaa
aagaaaaagcttgaagaagaagtcagtaagctgcgcagtagcagtttggttcctccgtca
tatggagcaacagcccctgaactatgtggagcttgtgcacctgaacttccctgtgaagct
gagagattagccacggaggtcgcagatgaaggaaggatcgattcagcgatggagacgagc
atgatgtctgtgcaggaaaatattcatatgctctctgaagaaaaacagagaataatgctg
ttagaacgaactttacagttgaaagaagaagaaaacaagcggttaaatcaaagactgatg
tctcagagcatgtcttcagtatcttcaaggcattctgaaaagatagctattagagatttt
caggtgggagatttagtgctcatcatcctagacgaacgccatgacaattacgtattattt
actgtcagtccgaccctgtacttcctccattcagagtctctgcctgccctggatcttaaa
ccaggtgagggtgcttcaggtgcaacgagaagaccctgggtgcttgggaaagtaatggaa
aaggaatattgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacaaag
ttttacagagtaaaagctgtgtcgtggaataagaaagtataa
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integrated database retrieval system
