Suncus etruscus (white-toothed pygmy shrew): 126020465
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Entry
126020465 CDS
T09902
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126020465 (CHD7)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126020465 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
126020465
NCBI-ProteinID:
XP_049637896
LinkDB
All DBs
Position
10:complement(40739893..40887105)
Genome browser
AA seq
2996 aa
AA seq
DB search
MADPGMMSLFGEDGNLFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSPT
QNQSKLTHFDHYNQYEQKMHLMEQPNRMMSNAPGNGLASPHSQYHNPPVPQVPHGGSGGG
GQMGVYPGMQGERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQPPPPQQPQPSPSGPPAQ
GHPQHLQQMGSYMARGDFSMQQHGQPQPRMSQFSQGQEGLNQGNPFIATSGPGHLSHGPP
QGSSLAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPPPGAVRPQTLTFSSRSQTVP
SPTLNNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNPSVPRYPNAVGFPSSSGQG
LMHQQPMHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGI
PLEVGSYPNMPHPQPSHQPPGAMGIGQRNLGPRNLQQSRPFMGMSSAPRELAGHMRPNGC
PGVGLADPQALQDRLLPGQQHPGQQPSFQQLPTCPPMQPHPGLHHQSSPPHPHHQPWAQL
HPSPQNTPQKVPVPQHSPSEPFLEKPVPDMTQVSGPKAQLVKSDDYLSSLEQQPQLKKKK
KKNNHIVTEDPSKSFGKDDFPGVDSQELNRNSLDGSQEEKKKKKRPKVKKDPKEPKEPKE
KKEPKEPKTPKAPKIPKEPKEKKARTATPKPKSSKKSSNKKPDSEASALKKKVNKGKPEG
SENSDLDKTPPPSPPPEEEEDSGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRD
SPSNTSQSEQQESVDAEGPVVEKIMSSRSIKKQKESGEEVEVEEFYVKYKNFSYLHCQWA
SIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDDRGEPV
THYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPEAERVERPPADDWKKSESSRE
YKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV
IAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAII
TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV
EELFSLLHFLEPSRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
EETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA
EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDI
LEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS
MSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIE
SEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQ
TRLYSAVKEDELMEFSDLESDSEEKPCTKPRRPQDRSQGYARSECFRVEKNLLVYGWGRW
TDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVN
HSGLSAPVPRGRKGKKVKAQSAHPMVQDADWLASCNPDALFQEDSYKKHLKHHCNKVLLR
VRMLYYLRQEVIGDQAEKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVFKH
GYEKYNSMRADPTLCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTR
IPFKDEIDEFANSPPEDKEETMELRNTGKHSESSAELGQLYWPNTSTLTTRLRRLITAYQ
RSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTF
GVIFDPLKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDEPPDLSS
TIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLL
VGAAKHGVSRTDYHILNDPELSFLDAHKSFAQNRGAGSISSLNPLAMGFGPSPAVLSSTH
VQDERGVGQAEGKVEESENAVSSENPEVKEEDEDEAEGRGKDSKNECESEASSVKNGLKG
MEVSTDTGPKSISEKGSEEDEEEKLEDDDKSEESSQPEGAVSRGKNFDEESNASMSTARD
ETRDGFYVEDGDPSAAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFD
FQGLIPGYTPPTLDSPLQKRSFAELSMVGQASISGSEELTTSPQLAKEDALNLSVPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREAASSTSNFASL
PSKFILPNVATPVSDAFKTQMELLQAGLSRTPTTRHLLNGSLVDGEPPLKRRRGRRKNVE
GLDLLFLSHKRTSLSAEDAEVTKGFEEDIETPPTRNIPSPGQLDPDTRVPVINLEDGTRL
VGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINT
LTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMF
DRLLTGPVVRGEGASRRGRRPKSEIARAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNL
QNLQSLQLAGLMGFPPGLATAATAGGDAKNPAAVLPLVLPGMAGLPSMFGLGGLLNNPLS
AATGNTTTASSQGEPDDSTSKVEEKGPENEEENKDSEKSTEAVPAPDPANGSVGAATGPA
GLPSNPLTFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSSEEKAPDK
AEAGPFQEEETLEGSDAEENPDKTAESSTLGDEIAQGEEPDSLDGGDELENHENDE
NT seq
8991 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccggggatgatgagtctttttggcgaggatgggaatcttttcagcgaaggc
ctcgaaggcctgggagaatgtgggtaccccgaaaatcccgtgaatcccatgggtcagcag
atgccgatagaccaaggctttgcttccttgcagccctccctgcaccacccgtctcccacc
cagaatcaaagcaagctgacccactttgatcactataatcagtacgaacagaagatgcat
ctcatggagcagccgaacaggatgatgagcaatgcccccgggaatggcctggcgtctcct
cactcacagtatcacaacccccctgtccctcaagtccctcatggtggcagcgggggtggc
ggtcagatgggcgtctacccgggcatgcagggtgagaggcacgggcagtcgttcgtggac
agcggctccatgtggggtccccgggctgtgcaggtgccggaccagatacgagccccttac
cagcagcagccgccgcccccccagcagccccagccttcgccatcaggaccccccgcccag
ggccacccgcagcacctgcagcagatgggcagctacatggcacgcggggacttctccatg
cagcagcatggccagccacagccgaggatgagccagttttcccaaggccaagagggcctc
aatcagggaaaccctttcatcgccacctcaggacccggccacttgtcccacgggcccccg
cagggttccagtctggccccttccctgcgtcattcggtgcagcagttccaccaccacccc
cctactgctctccacggagaatccgtcgcccacagtcccagattctcccctaatcctcct
ccaccaggggcagtccggccgcaaaccctcacctttagctctcggagtcagaccgtcccc
tcacctactctaaacaactcagggcagtattctcgctatccttacagtaacctaaatcag
ggattagttaacaatacagggatgaatcagaatctaggccttacaaacaatacccccatg
aatccgtccgtaccaaggtaccccaatgctgtaggcttcccatcaagcagtggtcaggga
ctcatgcaccagcagcccatgcaccccagtggctcactgaaccaaatgaacacgcaaact
atgcatccttcacagcctcagggaacttacgcctcgccacctcccatgtcacccatgaaa
gcaatgagcaatccagcaggcactcctcctccgcaagtcaggcctggcagtgctgggata
ccactggaagttggcagttatccaaatatgccccaccctcagccatctcaccagcccccc
ggtgccatgggaatcggacagaggaatctgggcccccgaaacctgcagcagtcgcgtcca
tttatgggcatgtcctcggcgcccagggagttggctggccacatgagaccaaatggttgt
cccggtgtgggcctggcagacccacaggcccttcaggaccgactgctccctggccagcag
catcctggtcagcagccatcttttcagcagttgccaacctgccctccgatgcagccccac
ccgggcctgcaccaccagtcttcacccccacacccgcatcaccagccttgggcacagctc
cacccatcaccccagaacaccccgcagaaagtgcctgtgcctcagcattctccatcggag
ccctttctagagaaaccagtgccggatatgactcaggttagtggaccgaaggctcagcta
gtgaagagtgatgattacctgtcgtcgctagaacagcagccacagctcaagaagaagaaa
aagaaaaacaaccacattgttacagaggatcccagtaaaagttttggtaaagatgacttc
cctggggttgatagccaagaactaaataggaactcgctagatgggtcccaagaagagaaa
aagaaaaagaaaaggccgaaggtaaaaaaagatcccaaggaaccgaaagaacccaaggag
aaaaaagagcccaaggaacccaagaccccaaaagcccctaagattcccaaagagccaaag
gaaaagaaagcaagaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataag
aaacctgattcagaagcaagtgctttgaagaaaaaggtcaacaagggaaaaccagaaggt
tctgaaaattcagacttagacaaaacgcccccaccgtctcctcctcctgaagaagaagaa
gactcaggtgttcagaagagacgctctagcaggcaggtgaagagaaagagatacacggaa
gacctggaattcaagatttctgatgaggaggcagatgatgcagatgctgctgggagggac
tcgccctcgaacacctcacagtccgaacagcaggaatctgttgatgcagaaggtccagtg
gtagaaaaaatcatgagtagtcgttcaattaaaaaacagaaggaatctggagaggaggta
gaagttgaggaattctatgtgaaatacaaaaacttctcttatcttcattgtcaatgggca
tctatagaagatctggaaaaagataaaagaattcagcaaaagattaaacgatttaaggca
aagcagggccagaacaaattcctttcagagattgaagatgagctttttaatccagattat
gtggaggttgatcggataatggactttgcccgtagcacagacgatcggggagagcctgta
actcactatctggtgaagtggtgctcactgccttatgaagacagcacttgggagttaagg
caggacatagatcaagcaaagatagaggagtttgagaaacttatgtccagggagccggaa
gcagaacgtgtggagcggcctcctgctgatgattggaagaaatcagagagttccagggag
tataaaaacaataacaaactcagggaataccagttggagggagtgaactggctacttttc
aattggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaactatc
cagtccattacatttctctatgagatatatttgaaaggaatccatggcccttttttagtc
attgccccattgtccacaatccccaactgggaaagggagttccgtacctggacagagttg
aacgtggttgtgtatcatgggagtcaagctagtcgtcggaccattcagttgtatgaaatg
tacttcaaagatccccagggccgagtgataaaggggtcctataagtttcatgccatcatc
actacatttgagatgatcttgactgattgtcctgagctgcggaacatcccatggcgctgt
gtggtcattgatgaggcccacaggctgaagaacaggaactgcaagctgctggagggactc
aagatgatggacttggaacataaagtgctgctgacagggaccccactacagaacactgtg
gaagagctctttagcttgcttcatttcttggaaccaagtcgcttcccttcagaaagcacc
tttatgcaagaatttggtgatctgaaaacagaagaacaggtgcaaaaactccaggctatt
ctaaagccaatgatgttgagacgcctgaaagaggatgtagaaaagaacttggcccccaaa
gaagaaactatcattgaagttgagctaacaaacattcagaagaaatattacagagccatc
cttgagaagaattttacatttctttccaaaggtggtggccaagctaatgtacctaatctt
ttaaacactatgatggaattgcgaaaatgctgcaatcatccataccttattaatggtgct
gaagagaaaattttggaagagtttaaagaaacacacaatgcagactctccagattttcag
ctccaggcgatgatccaggctgctggcaagctagtgctgattgacaagctgctgccaaaa
ctgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggatata
ctggaagactacctcattcagagacggtacccgtatgaaaggatcgacggtcgagtacga
ggcaacctccggcaggcagctattgacagattctccaaacctgactccgataggtttgtt
ttcctcctgtgcacaagagcaggaggtttaggcatcaacctgactgctgctgacacctgc
atcatctttgattctgactggaacccccagaacgatctccaggctcaagctagatgtcat
agaataggacagagtaaatctgtgaaaatatacaggctgattacaaggaattcttacgaa
agagagatgtttgacaaagcgagtttgaaactcggcctggataaagccgtgctacaatcc
atgagcggaagagaaaatgctacaaatggagttcagcagctttcgaagaaagaaatagag
gatcttctacggaagggggcctatggtgctctcatggatgaggaagatgaagggtctaaa
ttctgtgaggaagacatcgatcaaatcctactgcgtagaacccacaccatcaccattgag
tctgaagggaaaggctccacttttgcaaaggccagttttgttgcatctggaaataggaca
gatatatccttggatgacccaaatttctggcaaaagtgggctaagaaggctgaactggat
atcgatgccttaaatggaaggaacaacctagtaattgacactcctagagtgaggaagcag
accagactctacagtgcagtgaaagaggatgagctgatggaattttcagacttggaaagc
gattctgaagagaagccatgcacaaagcccaggcgacctcaggacaggtcccagggttat
gccaggagcgagtgctttagagtagagaagaatctgcttgtttatggctggggacggtgg
acagacatcctttcccacggacgctacaaacgtcaactcaccgagcaagatgtagaaacc
atctgtagaacgatccttgtgtactgtctcaatcattacaaaggagatgagaacatcaag
agcttcatctgggatctgatcacacccacggctgatggccagactcgagccctggttaat
cattctggtttatcagccccagtgccaaggggcaggaaagggaagaaggtgaaagcccaa
agtgcacatccaatggtgcaggatgcagactggctagccagctgcaacccagatgccctg
ttccaggaggacagctataagaagcacctgaagcatcactgcaacaaggtcctgctgcgt
gtccgcatgctctactatctaagacaagaagttataggagaccaggcagagaagatctta
gagggtgctgactcaagtgaagccgatgtgtggatacccgaacctttccatgccgaagtc
cctacagattggtgggataaggaggcagataaatccctcctaattggagtattcaaacat
ggctatgagaagtacaattctatgcgagctgaccccacattgtgctttctggaacgagtt
gggatgcccgatgccaaggccatagctgccgagcaaagaggaacagacatgctagcagat
ggcggtgatgggggagaatttgatagagaagatgaagacccagagtataaacctaccaga
attccgttcaaggatgaaatagatgaatttgcaaattctcctccagaagataaggaagaa
accatggaactccgcaacacaggcaagcacagcgagagtagtgctgagttaggccaactt
tactggccgaacacctcaaccctgaccacccgtctgcgccgcctcattactgcctatcag
cgcagctataagaggcaacaaatgaggcaagaggccctaatgaagactgaccggcggaga
cggcggcctcgggaggaagtgagagcactggaggcggaaagggaagccatcatctctgag
aaacggcagaagtggacaagaagagaagaggctgatttttaccgtgtggtgtccactttc
ggagttatctttgatcccctcaaacagcagtttgactggaaccaatttcgagcttttgcc
aggctggacaaaaaatctgatgagagtttggagaaatacttcagttgttttgtggccatg
tgtcggcgagtgtgtcgaatgcctgctaagccagatgacgagcctcctgacctctcttcc
acaatcgagcctatcacagaagaacgtgcctccagaaccctctatcgcattgaacttctg
cggaaaatccgagaacaagttcttcaccacccgcagctgggagagaggttgaaactctgc
cagccaagtttggacttgcccgagtggtgggaatgtgggcggcatgaccgagacttgctg
gtgggtgctgctaaacatggagtgagcaggacagattatcacatcctcaatgaccccgag
ttgtcctttctagacgcacataaaagtttcgcccagaacagaggggcgggtagcatttct
tccttgaaccccctggccatgggatttggcccgagccctgccgtcctctcttctactcac
gtccaggatgaaaggggggtgggacaagccgaaggcaaagtggaggagtctgaaaatgca
gtctcctcagaaaaccctgaggtgaaagaagaagacgaagacgaagctgagggcagggga
aaggacagtaaaaatgaatgtgagtccgaggccagctctgtaaagaatggactgaaaggt
atggaggtcagcacagatacggggcccaagtctatttcagaaaaaggttctgaagaggat
gaggaagaaaagctggaggatgatgataagtcagaagaatcttcccagcctgaaggagct
gtctctagagggaagaattttgatgaagaaagcaatgcttctatgagcactgcgagggat
gagacccgagatggattctacgtggaggatggggatccttcagcagcgcagcttcttcac
gaaagaacgtttgccttctcattttggcccaaggatcgggtaatgataaaccgattagac
aacatctgtgaagcagtgttgaaaggcaaatggccagtaaataggcgccagatgtttgat
ttccaggggctcatccctggctacacaccacccaccttggacagtcccctacagaagagg
agcttcgccgagctctccatggtggggcaggcgagcatcagtggaagtgaggaactcacg
acttccccccagttagcaaaggaagacgctctcaacctctctgtccctcgccagcggaga
aggaggcggcggaaaattgagatcgaggctgaaagagcggccaagcggcgcaacctcatg
gagatggtcgctcagctgcgggagtctcaggtggtctcggagaacggacaggagaaagtt
gtcgatttatccaaggcctcgagagaggccgcaagctctacctcaaattttgcatctctc
ccttccaagtttatcttgcctaacgtagcgacacccgtgtctgatgccttcaagacgcaa
atggaactgctccaggcaggcctgtcacgcacacccaccaccaggcatctgctcaacggc
tccctggtagacggcgagccccccctcaagaggagacggggacggaggaaaaacgtggag
ggcctcgatctgcttttcttgagccacaaacggacgtcattgagtgcagaggatgcagag
gtgaccaaaggttttgaagaagatatagaaaccccaccaacaagaaacattccttctcct
ggacaactagatccagacacacgggtccctgttataaatcttgaagatgggactaggctg
gtgggggaagacgctcctaaaaataaggatttagttgaatggctgaagttgcatcctact
tatactgttgatatgccaagttatgtaccaaagaatgcagatgtgctattttcctcattt
cagaaaccgaaacagaaacgacatcgatgtcgaaaccctaataaactggacataaacact
ttgacaggagaagaaagagtgcctgtggtcaataagcgaaatgggaagaagatgggtgga
gctatggcacctccgatgaaggatctaccgaggtggctggaagaaaatcctgaatttgcg
gttgctccagactggactgatatagttaagcagtctggtttcgttcccgagtcgatgttt
gaccgtctcctcactgggcccgtggtgaggggtgaaggagccagcagaagaggcagaagg
cccaagagcgaaatagccagagccgctgccgctgctgccgtggcctccacatcaggaatc
aatcctctgctggtgaacagtctgtttgcggggatggacctgaccagcctgcagaatctc
cagaacctccagtctctccagctggcaggtctcatgggcttccccccgggactggccact
gcggccacagccggaggcgacgccaagaaccccgccgccgtcctgcccctggtgctgcca
ggcatggccggcctgcccagcatgtttggcctcggggggctgctgaataaccctctgtcc
gctgctactggaaacaccactactgcttctagtcagggagaaccggatgacagcacttcg
aaagtggaagagaagggccctgagaacgaagaggagaacaaagactcggagaaaagcaca
gaggctgtgccggcccctgaccctgcgaatggctctgttggtgctgctacaggcccggcc
ggcttgccctccaacccgctcaccttcaaccctttcctcctgtccaccatggctccaggc
ctcttctacccctccatgtttctacctccaggactgggaggattgacactgcctgggttc
cccgccttagcaggactgcagaacgccgtgggctccagtgaagagaaggctccggacaag
gccgaggccgggccctttcaggaagaagagaccctggaaggcagtgacgctgaggagaac
cccgataagactgcggaatcttccaccttaggcgacgaaatagcacagggtgaagagccg
gactcgctcgacgggggggatgaactcgaaaaccatgaaaatgatgaataa
DBGET
integrated database retrieval system
