Suncus etruscus (white-toothed pygmy shrew): 126020501
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Entry
126020501 CDS
T09902
Symbol
TUBB4B
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin beta-4B chain
KO
K07375
tubulin beta
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04145
Phagosome
setr04540
Gap junction
setr04814
Motor proteins
setr05010
Alzheimer disease
setr05012
Parkinson disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126020501 (TUBB4B)
09144 Cellular community - eukaryotes
04540 Gap junction
126020501 (TUBB4B)
09142 Cell motility
04814 Motor proteins
126020501 (TUBB4B)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
126020501 (TUBB4B)
09164 Neurodegenerative disease
05010 Alzheimer disease
126020501 (TUBB4B)
05012 Parkinson disease
126020501 (TUBB4B)
05014 Amyotrophic lateral sclerosis
126020501 (TUBB4B)
05016 Huntington disease
126020501 (TUBB4B)
05020 Prion disease
126020501 (TUBB4B)
05022 Pathways of neurodegeneration - multiple diseases
126020501 (TUBB4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126020501 (TUBB4B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126020501 (TUBB4B)
04147 Exosome [BR:
setr04147
]
126020501 (TUBB4B)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
126020501 (TUBB4B)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
126020501 (TUBB4B)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126020501 (TUBB4B)
Exosomal proteins of colorectal cancer cells
126020501 (TUBB4B)
Exosomal proteins of bladder cancer cells
126020501 (TUBB4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
126020501
NCBI-ProteinID:
XP_049637939
LinkDB
All DBs
Position
10:complement(48872959..48875556)
Genome browser
AA seq
491 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNTLVS
EYQQYQDATAEEEGQFEEEAEEEVGLGFVHPYVGACELYSFTTYSGSHHCVCISSFCFHA
ASCSDTIKAFS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgtgcatttgcaggccgggcagtgcggcaaccagatcggtgcgaagttc
tgggaggtgatcagcgacgaacatggcatcgaccctactggaacctaccatggggacagc
gacctgcagctggagcggatcaacgtgtattacaacgaggccaccggtggcaagtatgtg
ccccgcgccgtgctggtggacctggagccaggaaccatggactcggtgcgctccggccct
ttcgggcagatcttccggcctgacaactttgtctttgggcagagtggtgccggcaacaac
tgggccaaggggcattacacagaaggtgcagagctggtggactcagtcctagatgtggtg
cggaaggaggccgagagctgcgactgtctgcagggcttccagctcacccattctctgggc
ggtggcacgggctcgggcatgggcaccctgctcatcagcaagatccgagaggagtaccct
gaccgtatcatgaacaccttcagcgtagtgccctcgcccaaagtgtcggacactgtggtg
gagccctacaatgccaccctctccgtccaccagctggtggagaacacggacgagacctac
tgcattgataacgaggcgctgtatgacatctgcttccgcaccctcaaactcaccaccccc
acctacggcgacctcaaccacctggtctcagccaccatgagtggagtcaccacctgcctg
cgcttccccggccagctcaatgctgacctgcgcaagctggccgtgaacatggtgcccttc
ccccggctgcactttttcatgccaggctttgcccctctgaccagccggggcagccagcag
taccgcgccctgactgtgccagagctcacccagcagatgtttgatgccaagaacatgatg
gctgcttgtgacccacgccacggccgctacttaactgtggccgccgtcttccggggccgc
atgtccatgaaggaggtggacgagcagatgctgaatgtgcagaacaagaacagcagctac
ttcgtggagtggatccccaacaacgtgaagacggccgtgtgcgacatccctccacggggc
ctgaagatgtcggccaccttcattggcaacagcacggccatccaggagctattcaagcgc
atctccgagcagttcacggccatgttccgccgcaaggctttcctgcattggtacacgggt
gagggcatggacgagatggagttcaccgaggctgaaagcaacatgaataccctggtgtcc
gagtaccagcagtaccaggatgccacagcagaggaggaaggccagttcgaggaggaggca
gaggaggaggtaggcctagggtttgtgcacccatacgtgggagcctgtgaactttattca
ttcacaacctattctggtagccatcactgcgtgtgcatttcctctttctgtttccatgct
gcgagctgttcagacacaattaaagccttttcatag
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integrated database retrieval system
