Suncus etruscus (white-toothed pygmy shrew): 126020686
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Entry
126020686 CDS
T09902
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126020686 (DENND4B)
Membrane trafficking [BR:
setr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
126020686 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
SPA
PPR_long
PPR_3
Motif
Other DBs
NCBI-GeneID:
126020686
NCBI-ProteinID:
XP_049638148
LinkDB
All DBs
Position
10:complement(36026053..36039306)
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AA seq
1487 aa
AA seq
DB search
MAEERPPRLVDYFVIAGLASDGAPIPEETWLPEPGGPLRPPRPAEPITDVAVVARALGEE
VPQGYTCIQTSAGGHPLELSAGLLGGTQPVICYRRGRDKPPLVELGVLYDGKERPKPGFQ
VLDTTPYSHSANLAPPGPGHPRTYLTYRRAAEGAGLHALGITDLCLVLPSKGEGTPHTYC
RLPRNLNPGMWGPAVYLCYKVGLAKANTLVYEAELLGRYPEEDNETFPLPESVPVFCLPM
GATIECWPAHTKYPVPVFSTFVLTGAAGDKVYGAALQFYEAFSRSRLSERQARALGLLSA
VERARPLEGRAVRCRRAIAVLSRWPAFPAFRAFLTFLYRYSVSGPHRLPLEAHISHFIHN
VPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPLSGASFLQLLQSLGPELAITLLLAVLTE
HKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPYIPLCPLVLADVLNAPVPFIVGIHSSYF
DLHDPPADVICVDLDTNTIFQTEEKKLLSPRTLPRRPYKVLLATLSNLYQQLDQTYTGPE
EEASLEFLLTDYEAVCGRRARLEREVQGAFLRFMACLLKGYRAFLRPLTQAPSEGSRDVD
NLFILQDFLKSRERSSHKLYSQLLRTQMFSQFIEECSFGSTRHAALEFFDSCVDKVHPEQ
EKPEAAPLVELEELSGNELTVFITPPEEPTVPEGSDAAPQYCYDGFPELKAELFESPQEQ
TGALPVPGPSRSAPSSPAPRRTKQEMKVAQRMAQKSAAKPEMWAHCLLGHCYGLWFLCLP
AFVRASPSRVRALHTAYHVLRAVESRKVVLPDEVCYRVLMQLCSHYGQPVLSVRVMLEMR
QAGIVPNTITYGYYNKAVLESKWPSGTPGSRLHWAKLRNVVLGAAQFRQPLRERRQRQQQ
QAKAKAAAGSQKGPRQERPSPSRPLQRQTTWAGRSFKDPASPTGRLVKSGSLGSARGVQP
TVEAGMAQMIEALGVLEPRESPVPWRDSSLSDLSLAGEEPIPRGSPSGSGSVLSAQSTEA
LEGPSGRISKAAGRQDEASTPRRSLGARIQQLLTPSRRSPASRVTPVELTPDLPPPTWRS
PMDSLLRPRERPGSTASESSASLGSEWDLSESSLSSLSLRRSSERLSDTPGSLQPPSLEI
LLSSCSLCCACDSLVYDEEIMAGWAPDDSNLNTTCPFCSRPFVPLLSVQTLDSRPSAPHP
QPASMGTSSSKDAPVPGGPGPVLSDRRLCLALDEPQLCNGHMGGTPPRRVEGGSWAYLSP
LVLRKELESLVENEGSEVLAMPELPITHPIIFWNLLWYFQRLRLPNILPCLVLASCDGFP
APQASVPWLTPDPASVRVRLLWDVLSPDPNSCPPLYVLWRTHSQIPQRVVWPGPVPESLN
LALLESVLRHVGLNEVHKAVGLLLETLGTPPTGLHLQRGIYREILFLTMAALGKDHVDIG
AFDKKYKSAFNKLASSMGKEELRQRRAQMPTPKAIDCRKCFGALLEC
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcggcccccccggctggtggattactttgtgatcgctgggcttgcaagt
gatggtgcacctatccccgaggagacctggctgcctgagcccggggggccgctgcgccca
ccacggcctgctgagcctattacggatgtggcagtcgtggccagggcattgggcgaggag
gtgccccagggctacacatgcatccagacgtcggccgggggccaccccttggagctcagt
gcagggctcctgggggggactcagcctgtcatctgctaccgcaggggccgggacaagccc
ccccttgtggagctgggggtgttgtatgatggaaaggagcgtcccaagcctggcttccaa
gtgctggacacgacaccctacagtcactcggccaacctagccccaccagggcctgggcat
ccccgcacctacctcacctaccggcgggcagcagaaggggcaggtttgcatgccctgggc
atcactgacctctgccttgtgctgcccagcaagggtgagggtacccctcacacctactgc
cgcctgcctcgaaatctcaaccctggcatgtggggccctgccgtgtacctgtgctacaag
gtgggcctagccaaggccaacactctggtgtacgaggcagagctactgggccgctacccg
gaagaggacaatgagacattcccgctgcctgagtcggtgccagtcttctgcctgcccatg
ggtgccaccattgagtgctggcctgcccacaccaagtaccctgttcccgtcttttccacc
tttgtgcttacgggtgccgctggtgataaggtatatggagccgccctgcagttctatgag
gctttctcccggtcccggctgtcagagcggcaggcgcgggccctgggcctgctgagcgca
gtagagcgggcacgacccctggagggtcgggcggttcgctgtcgccgtgccatcgcggta
ctgtcccgctggcctgccttccctgccttccgggccttcctcaccttcctctaccgctac
tcggtgtcgggcccccaccgcctgcccttggaagcgcacatctcccatttcatccacaac
gtgcccttcccctccccacagagacctcgcatcttggtgcagatgtctccctacgacaac
ctgctcctttgccagcccgtgtcctcacccttgcccctcagcggcgccagcttcttgcaa
ctgctgcagagcctaggcccggagctggccatcacgctgttgctggctgtgctcacggag
cacaaactcctggtgcattctctgcggcctgatcttctcaccagcgtgtgcgaggctctg
gtgtctatgatcttcccactgcactggcaatgcccttacatcccgctgtgcccactggtg
ctggctgatgtgctgaacgccccagtgcccttcattgtaggcatccactccagttacttc
gatctacacgacccgccggctgacgtcatctgtgtcgacctcgacaccaacacaatcttc
cagactgaggagaagaagctcctctcgccgcggaccctgcctcgccggccctataaggtg
ctgctggccacgctgagcaacctgtaccagcagctggatcagacctacaccggacctgag
gaggaagcctccctggagttcttgctcactgactatgaggctgtgtgcggtcgtcgggcc
cggctggagcgtgaggttcagggagccttcctgcgcttcatggcctgtctgctcaaaggc
taccgggccttcctgcgtccgctcacccaggcaccctccgaggggtctcgtgacgtcgac
aacctctttatcctgcaggacttcctcaagtcccgggagcgctccagccacaagctgtac
tcgcagctgctacgcacacagatgttctcacagttcattgaggagtgctcctttggctct
acgcgccatgctgcccttgagttcttcgactcctgtgtggacaaggtgcacccagagcag
gagaagccggaagctgctcctctggtggagttggaggaactgtcgggaaatgaactaacc
gtctttatcacgccccctgaggaacccacagtgcctgagggcagcgatgctgccccccag
tactgctatgacggcttccctgagctgaaggctgagctgttcgagtctccccaggagcag
acaggggccctgcctgtgcctggcccatcccgaagtgcccccagcagcccggccccccgc
cgcaccaagcaggagatgaaggtggcacagcgaatggcgcagaagtcggcagcgaagcca
gagatgtgggcccactgtctgctgggccactgctacggtctgtggttcctgtgtctgccg
gcctttgtgcgggcgtcaccctcccgcgtgagggccctgcacacggcctaccatgtgctc
cgcgcggtggagagccgtaaggtggtgctgccggatgaggtgtgttaccgagtgctgatg
cagctgtgttcacactacgggcagccggtgctgtcagtgcgggtcatgctagagatgcgg
caggcgggcattgtgcccaacaccatcacctatggctactacaacaaggctgtattggaa
agtaagtggccgtccgggaccccaggtagccgcctacactgggccaagctccggaacgtg
gtcctgggggctgcccagttccgacagcccttgagggagaggcggcagcgacagcagcaa
caggcaaaggcaaaagcagctgcaggttcccagaaagggccccgtcaggagcgtccctcc
ccttcccgccccctccagcgccagaccacatgggccgggcgaagcttcaaggacccagcc
tcacccactggacgcctggtgaagagcggcagtctgggcagtgcccggggggtgcagccc
actgtggaggctggcatggcccagatgatcgaggccttaggggtcctggaaccccgagag
tcaccagtaccctggcgtgacagcagtctctcggaccttagcctggcgggggaagagccc
atccccagaggcagtcctagtggttccggctcggtccttagtgcccagtcaactgaggcg
ctagaggggccgagtggccgaatatccaaggctgcagggcgtcaggatgaagccagcacc
cccagaagaagcctgggggcccgcatccagcagctgctcactccatcccgccgctcccct
gcctctcgggtcacccctgttgagctgacccctgacctgccacccccaacctggcgtagt
cccatggacagcctcttgcggccccgggagcgccccggttccactgcgtccgagagctct
gcctctctgggcagtgagtgggacctctcagagtcttccctcagcagcctaagcctccgc
cgttcctcagagcgcctcagcgacacccctgggtccttgcagcccccctccctggaaata
ttgctgtccagctgctccctgtgttgtgcctgcgactcgctggtgtatgacgaggagatc
atggccggctgggcacccgatgactccaacctcaacaccacctgccccttctgctcccgc
ccttttgtgcccctactcagcgtgcagaccctcgactcccgacccagtgccccccacccc
cagcccgcctccatgggtaccagcagcagcaaagatgcgcctgttcccggtggcccaggc
cctgtgctcagtgaccggaggctttgcctcgccctggacgagccccaactctgtaatggg
catatgggggggaccccgcccagacgggtcgagggtgggtcctgggcatacctgagcccc
ctggtgctgcggaaggagctggagtccttggtggagaatgagggcagtgaggttctggca
atgccagaactgcctattacccaccccatcatcttctggaaccttctgtggtacttccag
cggctgcgtctgcccaacatcctgccctgccttgtgctggcatcctgtgatgggttccca
gccccccaggcctcagttccctggttgaccccagatcctgcctctgtgcgggtacggctg
ctgtgggatgtcctgagcccagatcccaatagctgcccgcctctctacgtgctctggagg
acacacagtcagatcccacagcgggtggtgtggccgggccccgtgcctgagtctctcaac
ctggctctgctcgagtctgtgctgcgccacgtggggctcaacgaggtacacaaggcagtg
gggctcctactggaaaccctggggaccccacccactggcctacacctacagaggggcatc
taccgtgaaattctgttcctgacgatggcagctctgggcaaggaccatgtagacataggg
gccttcgacaagaagtataagtccgccttcaacaagctggccagcagcatgggcaaagag
gagcttcggcagcgccgagcacagatgcccactcctaaggccatcgattgccggaaatgc
tttggagcccttctagaatgctaa
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