Suncus etruscus (white-toothed pygmy shrew): 126020700
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Entry
126020700 CDS
T09902
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
126020700 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126020700 (HCN3)
Ion channels [BR:
setr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
126020700 (HCN3)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
126020700
NCBI-ProteinID:
XP_049638185
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Position
10:37347327..37359511
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AA seq
796 aa
AA seq
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MEAEQRPIATRTGDGATPGLEAAPPAGPAPAPSPAPAPAPAPAPAAATGSTPGSASGTEP
KRRQLGTLLQPAVNKFSLRVFGSHKAVELEQERVKSAGAWIIHPYSDFRFYWDLIMLLLM
VGNLIVLPVGITFFKEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAI
RTRYLRTWFLVDLISSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRL
SRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWV
SISHMVNHSWGRQYSHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIG
HATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILG
ELSEPLREEIINFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRK
MYFIQHGLLSVLARGACDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNA
VLEEFPMMRRAFETVAMDRLRRIGKKNSVLQRKRSEPSPGSSGGLMEQHLVQHDRDMARG
VRGLAPGTGARLSGKPVLWEPLVHAPLQAAAVTSNVAIALTHQRGSLPLSPDSPVVLLAR
STRRSAGSPASPLVPVRAGPLLARGPWASTSRLPIPPARTLHASLSRAGRSQVSLLGPPP
GGGGRRLGPRGRPLSASQPSLPQRAAGDGSPGRKGSGSERLPPSGLLAKPPGTVQTSRPP
VPESTTPRGPQLSANM
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgagcagcggccgatcgccacgcgcacgggcgacggggcgacccccggactg
gaggcggcaccccctgctggcccggcgcccgcgccatcgcccgcacccgcgcccgcaccc
gcacccgcacccgccgcggccacgggttcgactcccggctccgcgtccgggacggagccc
aagaggaggcagctcggcacgctgctccagcccgccgtcaacaagttctcccttcgcgtg
ttcggcagccacaaagcggtggagctcgagcaggaacgggtgaagtcggccggggcttgg
atcatccacccctacagcgatttcaggttttactgggatctgatcatgcttctgctgatg
gtggggaatctgattgtgctccctgtgggcattaccttcttcaaggaagagaactcccca
ccctggatcgtcttcaacgtcctttctgacaccttcttcctgttggatctggtgctcaac
ttccgcacgggcatcgtggtcgaggagggggctgagatcctgctggcgccccgggccatc
cgcacacgctatctgcgcacctggttcctggtggacctcatctcctccatccctgtggat
tacatcttcctggtggtggaactggagccccggctggatgccgaagtctacaagacagcc
cgagccctccgcattgtgcggttcaccaagatcctcagcctgcttcggctgctccgcctc
tcccgcctcatccgctacatccaccagtgggaggagatcttccacatgacctacgacctg
gcgagcgccgtggttcgcatcttcaacctcatcggcatgatgctgctgctctgccactgg
gacggctgcctgcagttcttggtccccatgctgcaggacttcccctctgactgctgggtg
tccatcagccacatggtgaaccactcatggggccgccagtactcccacgccctgttcaag
gccatgagccacatgctgtgcatcggttatgggcagcaggcaccagtgggcatgccggat
gtgtggcttaccatgcttagcatgatcgtgggtgccacatgctatgccatgttcatcggc
cacgccactgcactcatccagtccctggactcctctcggcgccagtaccaggagaagtac
aagcaggtggagcagtacatgtccttccacaagcttcctgcagacacgaggcagcgcatc
catgagtactacgaacaccgctaccagggcaagatgtttgatgaggagagcatcctgggg
gagctgagcgagccgctgagggaggagatcataaacttcacgtgccgggggctggtggct
cacatgccgctattcgcccatgccgaccccagcttcgtcactgctgtgctcaccaagctg
cgcttcgaagttttccagccgggtgacctggtggtgcgtgaaggttccgtgggcaggaag
atgtacttcatccagcacgggctgctcagcgtgctggcacggggcgcatgcgacacccgc
ctcactgacggatcctactttggggagatctgcctgctgacgcggggccggcgcaccgca
agtgtgcgggcggacacctattgccgcctctactcactcagtgtggaccatttcaacgcg
gtgttggaggaattccccatgatgcgccgggcctttgagacggtggctatggatcggctg
cgccgcataggcaagaagaactctgtgctccagcggaagcgctctgagcccagtccgggc
agcagtgggggtctcatggagcagcacctggtgcagcatgaccgggacatggcccggggt
gtccgtggcctcgccccaggcacaggtgcacggctcagtgggaaaccggtgttgtgggag
cccctggtgcacgcacccttgcaagctgccgctgtcacctccaacgtggccattgctctg
acacaccagcggggctctctgcctctctcccccgactctccagtcgtcctcctggctcgc
tccactcggcgctctgcaggctccccagcttccccactggtgcctgtccgtgcaggtccc
ctgttggcccggggcccctgggcctccacctcccgcttgcccatccctcctgcccgcact
ctccatgccagcttgtcccgagccggccgttcccaggtatccctgctaggccctccccct
ggaggaggtggacgacggttgggacctcgaggccgacctctctcagcttcccaaccctcc
ctgcctcagcgggcagcaggcgacgggtctccaggccggaagggctctgggagcgagcgc
ctgccgccatcagggctactggcaaagcctccagggacagttcagacctctcgcccacca
gtgccagagtcaaccactccccggggcccccagctctccgccaacatgtga
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