Suncus etruscus (white-toothed pygmy shrew): 126020717
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Entry
126020717 CDS
T09902
Symbol
MEX3A
Name
(RefSeq) RNA-binding protein MEX3A
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126020717 (MEX3A)
04121 Ubiquitin system [BR:
setr04121
]
126020717 (MEX3A)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126020717 (MEX3A)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126020717 (MEX3A)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126020717 (MEX3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
126020717
NCBI-ProteinID:
XP_049638219
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All DBs
Position
10:complement(38125841..38131022)
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AA seq
532 aa
AA seq
DB search
MPSLVVSGIMERNGGFGELGCFGGSAKDRGLLEDERALQLALDQLCLLGLGEPPAPTAGE
DGGGGGGGAPQPPAAPQQPAPPPPPPPAAGPPAVPPSVPPAAPSAAQTPQPPAAPKGPGD
AKLCALYKEAELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRG
EEPVFMVTGRREDVATARREIISAAEHFSMIRASRNKSGTAFSVAPALPGQVTIRVRVPY
RVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRT
GKILEYNNENDFLAGSPDTGCALDSRYSEAWRVHPPGCKPLSTFRQNSLGCIGECGVDAG
FEAPRLGEQGSDFGYGGGYLFPSGYGVGKQDMYYGVAETSPPLWAGQDNATTPSSVLFSS
ASSSSSSSAKARAGPPGAHRSPASTGPELAGLPRRPPGEPLQGFSKLGGAGLRSPGGGRD
CMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHITATQAIRIFS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtctagtggtatctggaatcatggagaggaacgggggcttcggggagctgggg
tgcttcgggggcagcgccaaggaccgcgggctgctggaagacgagcgcgccctgcagctg
gctctcgaccaactctgcctgctgggtttgggggagccccccgcccccacggcgggcgag
gacgggggcggcggggggggcggcgccccccagccgcccgccgccccccagcagccggcc
ccgccgccgccgccgccccccgccgcggggccccccgccgtgccccccagcgtgccgccg
gccgcccccagcgcggcgcagaccccccagccgcccgccgcccccaaagggcccggcgac
gccaagctctgcgcgctctacaaggaggccgagctgcgcctcaaaggcagcagcaacacc
accgagtgcgtcccggtgcccacctcggagcacgtggcggagatcgtgggcaggcaaggc
tgtaagattaaggctctgcgggccaagacgaacacctacatcaagactccggttcgtgga
gaagagccagtgttcatggtgaccgggcggcgggaagacgtggccacggcccgccgcgag
atcatctcggccgcggagcacttctccatgatccgcgcctcgagaaacaagtcaggcacc
gccttcagcgtggcacccgcgctgcccggccaggtgaccatccgtgtgcgggtgccctac
cgcgtggtggggctggtcgtgggccccaagggggccaccatcaagcggatccagcagcag
accaacacctacatcatcacccccagccgcgaccgggaccccgtgttcgagatcacgggg
gcaccgggcaacgtggaacgggcgcgcgaggagatcgagacgcacatagccgtgcgcact
ggcaagatcctcgagtacaacaacgagaatgactttctggccggcagccccgacaccggc
tgcgccctggacagccgctattctgaggcctggcgtgtgcatcccccgggttgcaagccc
ctgtccactttccgccagaacagcctgggctgcatcggagagtgtggtgtggacgcaggt
tttgaggccccacgcctgggcgagcagggcagcgacttcggctacggtggtgggtacctg
tttcccagtggctacggggtgggcaagcaggacatgtactacggagtggctgagaccagc
cccccgctatgggcaggccaggacaatgccaccacacccagctccgtgctcttctcctcc
gcctcctcgtcctcatcctcatcggccaaggcccgagccgggcctccaggtgcccaccgc
tcacccgcttccaccgggcccgagctggccggcctcccacgacgcccacccggagagcct
ctgcaaggcttctccaaactcgggggtgcaggccttcgcagccccggcggcgggcgggat
tgcatggtgtgcttcgagagcgaggtgactgcagccctggtgccctgcgggcacaacctc
ttctgtatggagtgtgcggtgcgcatctgcgagaggacggaccccgagtgtcccgtctgc
cacatcactgccacacaagccatccgaatattctcctaa
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