Suncus etruscus (white-toothed pygmy shrew): 126020728
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Entry
126020728 CDS
T09902
Symbol
FDPS
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00900
Terpenoid backbone biosynthesis
setr01100
Metabolic pathways
setr05164
Influenza A
setr05166
Human T-cell leukemia virus 1 infection
Module
setr_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126020728 (FDPS)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
126020728 (FDPS)
05164 Influenza A
126020728 (FDPS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
setr01006
]
126020728 (FDPS)
Enzymes [BR:
setr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
126020728 (FDPS)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
126020728 (FDPS)
Prenyltransferases [BR:
setr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126020728 (FDPS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
126020728
NCBI-ProteinID:
XP_049638238
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All DBs
Position
10:37410434..37424452
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AA seq
419 aa
AA seq
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MPLSCWLRSVGVFLLPVPYWAFRERCLGLLRRPSLGHGCSVPGAWHSVRCWCQAWTKEPR
SLPSSRMNGGKNSDAVSQEKQEFLQYFPEIVKLLTEDDLDHPEIGDVITRLKEILEYNTL
GGKYNRGMTVVAAYRELVGPKKQDAKEIQRALTVGWCVELLQTFYLMVDDIMDSSITRRG
KLCWYKKPGIGLDAVNDSLMVEACIYRLLKRCCRDQPYYLNLIELFLEITYLSEIGQSLD
VMTAPQDSVDLGRFTEKRHKDIVVYKTAFYSFYLPVAAAMYMAGIDDEKTHANAKRILLE
MGVFFQIQDDYLDFFGDPSVTGKIGTDIEDNKCSWLVVQCMQRASPEQRQILQENYGQKD
PKKVAKVKALYEEMDLQGVFTRYEEDSYNRLVSLVEKDAKPLPPSIFLGLAQKIYKRRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtcctgctggctgaggtctgtgggggtcttcttgctgccagtcccttactgg
gcattccgggagaggtgtctcggactcctccggcggccctccctagggcacgggtgctca
gtgccgggagcctggcacagtgtccgctgctggtgccaggcgtggacaaaggagcctcga
tcacttccctcttccagaatgaatggaggcaagaattcagatgcagttagccaagagaag
caggaattcctccagtacttccctgagattgttaagttgctgacagaagatgacctggac
caccctgagataggagatgtgatcacccgtctcaaggagatcctggagtacaacacactt
gggggcaaatacaatcggggcatgacagtggtggccgcctaccgggagctggtcgggccc
aagaagcaggatgccaaggaaatccagcgtgccctcactgtgggctggtgtgtggaactg
ctccaaactttctacctgatggtagatgacatcatggattcatccataactcgccggggg
aagctttgttggtataagaagccgggcataggtctggatgctgtgaatgattctctgatg
gtggaggcctgtatctatcgtctgttgaagcgctgctgccgggatcagccctattacctg
aacctcattgaactcttcctagagataacctatctgagtgaaattgggcagtctctagat
gtcatgacagccccacaagacagcgtggatcttggcagattcactgaaaagaggcacaaa
gacattgtcgtatacaagaccgccttctactccttctaccttcctgtggctgctgccatg
tacatggcaggcattgacgatgagaagactcatgctaatgccaagagaatcctcctagag
atgggagtgttctttcaaatccaggatgattatctggacttctttggggaccccagtgtg
acgggcaagattggcaccgacattgaggacaacaagtgcagctggctggtggtccagtgt
atgcagcgggcctcgccagagcagcgtcagatcctacaggaaaactatgggcagaaggat
cccaagaaggtggctaaagtgaaggcgctctatgaggaaatggatctgcaaggagtgttc
acacggtatgaagaagacagctacaatcgccttgtgagcctcgtggagaaggatgcgaag
cccctgccaccgagcatcttcctggggctggcacagaagatctataagcgcagaaaatga
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