Suncus etruscus (white-toothed pygmy shrew): 126020732
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Entry
126020732 CDS
T09902
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04080
Neuroactive ligand-receptor interaction
setr04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
126020732 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
126020732 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126020732 (TRPV1)
Ion channels [BR:
setr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126020732 (TRPV1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
126020732
NCBI-ProteinID:
XP_049638246
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Position
1:157194173..157226342
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AA seq
846 aa
AA seq
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MEDLARVKKRGTSDLGGSEDQPQEDSCSDPVDGDPDSKPDTDNPHIFSTTKNQSQLFGKC
DWEGTSPLDDSHEGGKMACPSIRISPAIIIQRSVDGPTYSRLLPQNSVHAGNKKNLQLYD
RRKIFEAVAQNNCEELENLLLFLQRSKKHLMDSEFKDPETGKTCLLKAMLNLHDGQNDTI
PLLLEIARKTNSLKEFVNASYTDNYYRGQTALHIAIERRNMALVKLLVENGADVQAAANG
DFFKQSKGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQRADISAKDSVGNTVLHALVE
VADNTADNTKFVTSMYNEILILGAKLHPTLKLEELTNKKGLTPLSLAARSGKIGVLAYIL
QREIREPDCRHLSRKFTEWAYGPVHSSLYDLSCIDTCENNSVLEVIAYSSSDTPNRHDML
LVEPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTMAAYYRPVDGLPPFELKNTVKDYF
RVTGEILSVLGGVYFFFRGIQYFLQRRPSLKTLFVDSYSEMLFFVQSLFMLGTVVLYFSH
CKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFST
AVVTLIEDGRNSSALTDTSSHRVRGPGCRTTDSNYNSLYFTCLELFKFTIGMGDLEFTEN
YDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSF
FKSMRRAFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNNNVGIINEDPGNCEGVKRT
LSFSLRSGRVSGRNWKNFALVPLLRDTSTRERHPGQPEEVHLRHFSASLKPEDAEIFKDP
SALEEK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggaagatctggcaagggtgaagaaacggggaacttcagacttaggagggtctgaagac
caaccccaagaggattcctgctcagaccctgtggatggtgaccctgactccaagccagat
acagacaatccccacatcttttccacaacaaagaaccagagccagctttttgggaaatgt
gactgggaggggacttctcccctagatgattcacatgaaggaggcaaaatggcctgcccg
tccatcagaatcagtcctgctatcatcatccagaggtctgtagatggcccaacttactcc
aggttgctgccccagaattcagtccatgcagggaacaagaagaacctccagctctatgat
cgcaggaagatctttgaagctgtggctcagaataactgtgaagagctggagaatctgctg
ctcttcctgcagaggagcaagaagcatctcatggacagcgagttcaaagacccggagaca
ggcaagacttgtctgctgaaagccatgctgaatctgcatgatgggcagaacgacaccatc
cctctgctcctggagattgcacggaagaccaatagcctgaaggagtttgtcaatgccagc
tacacggacaattattataggggccagacagcgctgcacattgccattgaacggcggaac
atggctctggtgaagctcctggtggagaatggggcagatgtccaggctgcagctaacggc
gacttctttaagcaaagcaaagggcggcctggcttctattttggtgaactgccgctctcc
ctggctgcatgcaccaaccagctgggcatcgtgaagttcctgctgcagaactcctggcag
cgggcagacatcagcgccaaggactctgtgggcaacacggtgctgcacgcgctggtggag
gtggctgacaacacggccgacaacaccaagtttgtgacaagcatgtacaatgagattttg
attctgggagccaaactccaccccacactgaagttggaggagctcactaacaagaaaggg
ctgacgccactgtcattggccgccaggagtgggaagatcggggtcttggcctacattctg
cagagggagatccgggaacctgactgcagacacctgtccaggaagtttactgagtgggcc
tatgggcctgtacattcttcgctctacgacctgtcctgtattgacacttgtgagaacaac
tctgtgttggaggtgattgcttacagcagcagcgacacacccaatcgccatgacatgctc
ttggtggagccactgaaccgactcctgcaagacaaatgggacagatttgtcaagcgcatc
ttctacttcaacttttttgtctactgcttgtacatgatcatcttcactatggctgcctac
tacaggcctgtggatggcttgcctccttttgagctgaaaaacacagtcaaagactatttc
cgagtcactggagagattctttcggtattagggggagtctacttttttttccgagggatt
cagtattttctgcagaggcggccgtcactgaagaccttgtttgtggacagctacagtgag
atgcttttctttgtgcagtcactcttcatgctgggaactgtggtgctgtacttcagtcac
tgcaaagagtatgtagcctccatggtgttctccctggccatgggttggaccaacatgctc
tactacacccgtggtttccagcagatgggcatctatgctgtcatgattgagaagatgatc
ctgagggacctgtgtcgattcatgtttgtctacctcgttttcttgtttgggttttccaca
gctgtggtgacgctgattgaggatgggaggaactcctcggctttgacagacacttcatca
cacagagttcgagggcctgggtgtcggactactgatagcaactacaatagcttgtacttc
acgtgcctggagctcttcaagttcaccatcggcatgggggacctggaattcaccgagaat
tatgacttcaaggctgtcttcatcatcttgctcctggcttacgtgatcctcacctacatc
ctcctgctcaatatgctcatcgccctcatgggcgagactgtcaacaagattgcgcaggag
agcaagaacatttggaagctgcagagagccatcaccattctggacacagagaagagcttt
tttaagagcatgagacgggccttccgctcaggcaagctgttgcaggtggggtacacaccc
gatggcaaggacgactacaggtggtgtttcagggtggatgaggtgaactggaccacctgg
aacaacaatgtgggcatcatcaacgaagacccgggcaactgtgagggtgtcaagcgaacc
ctgagcttctccctgcgatcaggcagagtttcagggagaaattggaagaactttgccctg
gttccccttttaagagatacaagtacccgagaaaggcaccctggtcaacctgaggaagtt
cacctgaggcacttttcagcatccctcaagccagaagatgctgagatcttcaaggaccct
tctgctctagaggagaagtga
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