Suncus etruscus (white-toothed pygmy shrew): 126020805
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Entry
126020805 CDS
T09902
Symbol
GRIN1
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04014
Ras signaling pathway
setr04015
Rap1 signaling pathway
setr04020
Calcium signaling pathway
setr04024
cAMP signaling pathway
setr04080
Neuroactive ligand-receptor interaction
setr04082
Neuroactive ligand signaling
setr04713
Circadian entrainment
setr04720
Long-term potentiation
setr04724
Glutamatergic synapse
setr05010
Alzheimer disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05030
Cocaine addiction
setr05031
Amphetamine addiction
setr05033
Nicotine addiction
setr05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
126020805 (GRIN1)
04015 Rap1 signaling pathway
126020805 (GRIN1)
04020 Calcium signaling pathway
126020805 (GRIN1)
04024 cAMP signaling pathway
126020805 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
126020805 (GRIN1)
04082 Neuroactive ligand signaling
126020805 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
126020805 (GRIN1)
04720 Long-term potentiation
126020805 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
126020805 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126020805 (GRIN1)
05014 Amyotrophic lateral sclerosis
126020805 (GRIN1)
05016 Huntington disease
126020805 (GRIN1)
05017 Spinocerebellar ataxia
126020805 (GRIN1)
05020 Prion disease
126020805 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
126020805 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
126020805 (GRIN1)
05031 Amphetamine addiction
126020805 (GRIN1)
05033 Nicotine addiction
126020805 (GRIN1)
05034 Alcoholism
126020805 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126020805 (GRIN1)
Ion channels [BR:
setr04040
]
Ligand-gated channels
Glutamate (ionotropic)
126020805 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
126020805
NCBI-ProteinID:
XP_049638355
LinkDB
All DBs
Position
10:complement(48926878..48956982)
Genome browser
AA seq
907 aa
AA seq
DB search
MSAMHLLTLALLLSCSFARASCDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDHKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFSNYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPPGGETEKPRGYQMSTRL
KIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGF
CIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLT
INNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLY
LLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAG
FAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVE
LSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGF
GIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFM
LVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQQYHPTDITGPLNLSD
PSVSTVV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatgcatctgctgaccctcgccctgcttctttcctgctccttcgcgcgagcc
tcctgcgaccccaagatcgtcaacatcggcgcggtgctcagcactcgcaagcacgagcag
atgttccgcgaggcagtgaaccaggccaacaaacgccacggctcctggaagctgcagctc
aacgccacgtccgtcacgcacaagcccaacgccatccaaatggccctgtcggtgtgcgag
gacctcatctccagccaggtctatgccatcctggttagccaccccccaacgcccaacgac
cacttcacccccacccccgtctcctacacggctggcttctaccgcatccctgtgctggga
ctgaccacgcgcatgtccatctactcggataagagcatccacctgagcttcctgcgcacg
gtgccgccctactcgcaccagtcgagcgtgtggttcgagatgatgcgcgtgtacagctgg
aaccacatcatcctgctggtgagcgacgaccacgagggccgcgcggcccagaagcgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgaccacaagcgcggacccaaggccgagaaggtgctgcagtttgacccg
gggaccaagaacgtgacagctttgctcatggaggcgagagagctggaagcccgtgtcatt
atcctctcagccagcgaggacgatgcagccaccgtgtaccgagcggccgcgatgctgaac
atgacgggctccggctacgtgtggctggtcggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggcatcatcgggctgcagctcatcaacggcaagaacgagtcggcg
cacatcagcgacgcggtgggcgtggtggcgcaggcggtgcacgagctgctggagaaggag
aacatcaccgacccgccgcggggctgcgtgggcaacaccaacatctggaagacggggccg
cttttcaagagggtgctgatgtcctccaagtactcagagggcgtgactggccgcgtggag
ttcaatgaagacggggaccgaaagttctccaactacagcatcatgaacctgcagaaccgc
aagctggtgcaagtgggcatatacaacggcacccatgtcatccccaacgacaggaagatc
atctggccaccaggaggggagacggagaagccccgagggtaccagatgtccactaggcta
aagatagtgacgatccaccaagagcccttcgtgtatgtcaagcccacaatgagcgatgga
acatgcaaggaagaattcacagtcaatggcgatccggtcaagaaggtcatttgcacaggg
cccaatgacacctctcctggcagcccacgacacacggtgcctcagtgctgctatgggttc
tgcatcgacctgcttatcaagctggcgcggactatgaacttcacctacgaggtgcacctt
gtggccgacggcaagttcggcacacaggagcgggtgaacaatagcaacaagaaggagtgg
aacgggatgatgggcgagctcctcagcggccaggcagacatgattgtggctccactgacc
atcaacaatgagcgcgcacagtacatcgagttctccaagcccttcaagtaccagggcctg
accattctggtcaagaaggaaattccccgtagcacactggactcgttcatgcagcctttc
cagagcactctgtggctgctggtgggactgtcggtgcatgtagtggctgtgatgctctat
ctcctggaccgcttcagtccctttggccggttcaaagtgaacagcgaggaggaggaagaa
gatgcacttaccctatcctcggccatgtggttctcctggggcgtccttctgaactccggc
atcggagaaggtgccccccggagcttctctgcccgtatcctgggaatggtgtgggccggc
tttgccatgatcatcgtggcctcctacactgccaacctggcagccttcctggtgttggac
cggccggaggagcgcatcacaggcatcaatgacccccggttgagaaacccctctgacaag
ttcatctacgccacagtgaagcagagctctgtggacatttacttccggcggcaggtggag
ctgagcaccatgtaccggcacatggaaaagcacaactatgagagcgcggctgaggccatc
caggctgtgcgggacaacaagctgcacgccttcatctgggactctgctgtgctggagttt
gaggcctcgcagaagtgtgacctggtcaccacgggcgagctattcttccgctccggcttc
ggcattggcatgcgcaaggacagtccctggaagcagaacgtctccctgtccatcctcaag
tcccacgagaatggcttcatggaagacctggacaagacatgggttcggtaccaggagtgc
gactcgcgcagcaatgcccctgcgactctcacctttgagaatatggcaggggtcttcatg
ctggtggccgggggcatcgtggccggcattttcctcatcttcatcgagattgcctacaag
cggcacaaggatgcccgccggaagcagatgcagctggccttcgctgcagtgaacgtgtgg
aggaagaacctgcagcagtaccatcccactgatatcacgggcccgctcaacctctcagat
ccctcggtcagcaccgtggtgtga
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integrated database retrieval system