Suncus etruscus (white-toothed pygmy shrew): 126020837
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Entry
126020837 CDS
T09902
Symbol
CDH17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
126020837 (CDH17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126020837 (CDH17)
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Major cadherins
126020837 (CDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
Cadherin_pro
SKG6
Motif
Other DBs
NCBI-GeneID:
126020837
NCBI-ProteinID:
XP_049638371
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All DBs
Position
10:4639375..4736211
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AA seq
884 aa
AA seq
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MCKIPVIATAVAKRESQGESHVTGDWESVDLEKSWKVEWDPERVQHGKIQNLNDSSPFVH
RQHRSGLHDTTGYGQIGKFSGPLKPMTFQISEGQEANQIIFQFKANHPAVDFKVTGDTDG
IFQIQSDGLLYCTKPLDRETRAVHILQVSAVNDQGVTVEGPVAITIEVKDINDNRPQFLQ
SQYEGTVRQNSRPGIPFMFVNATDLDDPATPNGQLFYHILLQLPKVGEVMYFQIDNKTGE
ISLTKEGCQELDPSKNPAYNLVVLVKDMGDQKENSFSDTTSVDIIVLENIWKEPAPVVIV
ENSTDPHPIKITQVQWNDPGARYSLEEKGKLPRFPFSIDQNGDIYVTEPLDREEKDSYVF
YAVAKDELGKSLDKPLEIKVKVEDINDNPPSCPPTETVFEIQENENIGNDIGRIVAYDLD
EANTVNSILKYRLVDQTPKYPREDLFLVQAYTGVFQLAKMSLKKQDSPQYNLTVEVSDKD
FTTLCHVQINLIDINDQIPIFEKSDYGNLTLSEDTPIGSTILFIQAIDADEPFTGSSKIL
YRIIEGDNEGRLEVETDLQTNIGSVILKKPLDFETTPVHNIVFKAENPEPLVSGVQYNDS
SFATFQLIVANVNEAPRFTQHVFQARVREDVAINTVVGNVTAWDPEGQDISYSLRGNKRG
WLKIDPVTGEIFSAARLDRETEEVYRVQVVATETGGSVLSTTAEFNLALTDVNDNAPRLA
KEYTGLFLCHPLSAPGSLIFEATDDDLQPPQGPQFTFSLGSESLKNSWQVSNVNGTHASI
STKHRNFEEKVYNVPIRINDNGQPPLENTVYLPITFCKCESGSCYRPAGQQPGIPTVGMA
VGILLTVFLIIGIILAVVFCRMKKNKDNFNVENAEAAEAKPLRK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaaatccctgtcattgcaacagcagtagccaaaagggaaagccaaggggaaagt
catgtaactggcgattgggaaagcgtagacttggagaaatcatggaaagttgaatgggat
ccagaacgggtccagcatggaaaaattcagaatcttaatgattctagcccctttgttcac
agacagcacaggtctggacttcatgatacaactggatatggtcaaattggaaaatttagt
ggtcctctgaaaccaatgacatttcaaatctccgaaggccaagaagcaaatcaaatcata
ttccagtttaaggccaatcatcctgctgtggatttcaaagtaactggggatacagatgga
atatttcagattcaatcagatggacttctgtactgcactaaacccctggacagagaaaca
agagctgtacacatactacaggtctcagctgttaatgatcaaggagttacagttgagggt
ccagtcgccatcaccatagaagtgaaagacatcaatgacaacaggcctcagtttcttcag
tcacagtatgaaggcacagtaagacagaattctcgtccaggaatacctttcatgtttgtc
aatgctaccgatctggatgatccagccactcccaatggccaacttttttatcatattctt
ctccagcttcccaaggttggtgaagtcatgtattttcagatcgacaacaaaacaggggag
atttcacttactaaagaaggatgtcaggaattggatcccagtaagaatcctgcttataat
ctggtagtcttagtgaaggacatgggagaccagaaagaaaattccttcagtgacaccaca
tctgtggatattattgtgttggagaatatttggaaggagccagcaccagtggttattgta
gaaaactcaacagatccacatcccataaagattactcaggtacaatggaatgatccaggc
gcacgttattccttagaagaaaagggaaagctgccacgattcccattttcaattgaccag
aatggagatatttatgtgactgaacccttggaccgagaagaaaaggattcatatgttttt
tatgcagttgcaaaggatgagcttggaaaatctcttgacaagcctcttgaaatcaaagtg
aaagttgaggacataaatgataatcctccttcttgtccacctacggagactgtatttgag
atccaggagaatgaaaatataggaaatgatattgggagaattgttgcttatgacctggat
gaagcaaacactgtcaatagtattttaaaatacagacttgtggatcaaacccccaagtat
cccagagaagatctcttcttggtccaggcctacacaggagtgttccagttagctaagatg
tcattgaaaaagcaagactctccacagtataatttgacagtagaggtatctgacaaagat
ttcacaactctctgtcatgtgcaaatcaaccttattgatatcaatgatcagatccccatc
tttgaaaagtcagattatggaaacctaactctctccgaagatacacccattggatccacc
atcttattcatccaagccattgacgctgatgaaccgtttactggaagttctaagatcctg
tatcgaattatagagggagacaatgaggggagactggaagttgagacagatttacaaaca
aacattggctctgtcatacttaaaaagcctcttgattttgaaacaacacccgttcacaac
attgtgttcaaagcagagaatccagagccactggtgtccggtgtacaatacaatgacagt
tcctttgccacattccaacttattgtggccaacgttaatgaagcgcctcgatttacccaa
cacgtatttcaagcaagagtcagggaggatgtggctataaacactgtagtaggcaacgtg
actgcatgggatccggaaggccaggacataagttattcactgagaggtaacaaacgagga
tggcttaaaatagaccctgtgactggcgagatttttagtgcagctcggttggacagggaa
actgaggaagtatatcgggtacaggtggtggcaactgaaacaggtggctctgtcttgagc
actacagcggagttcaacctggcacttacggatgtgaacgacaatgccccacgcttagcc
aaggagtacacaggcttgttcttgtgccatcccctcagtgctcctgggagtctcatcttt
gaggccactgatgatgatttgcagccacctcagggcccgcagtttacattttccctgggc
agtgaatccttgaaaaacagctggcaagtttccaatgtcaacggaacacatgccagtatc
tccaccaagcataggaactttgaagagaaagtttataatgttccaatacgcatcaatgat
aatggtcaaccacctttggaaaatactgtctatttaccaattactttctgcaagtgtgaa
tctggaagttgttaccgacctgcaggccaacaacctggaatacccactgtgggtatggct
gttggtatactcctaaccgtatttttgattattggtataattttagcagttgtgttttgc
cgaatgaagaagaataaagataactttaatgttgaaaatgcagaagcagctgaagccaaa
cctttgagaaaatga
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