Suncus etruscus (white-toothed pygmy shrew): 126020884
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Entry
126020884 CDS
T09902
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
126020884 (LCMT2)
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
126020884 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
126020884 (LCMT2)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
126020884 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_6
Kelch_3
Kelch_2
Kelch_1
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
126020884
NCBI-ProteinID:
XP_049638433
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Position
10:complement(87727114..87729250)
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AA seq
688 aa
AA seq
DB search
MGARSHRRGAGAVQSTNDSSALSKRSLAARGYVQDAFAQLLVPGAGRRAPLIHRGYYARA
RAVQHCVDAFLERMRALPGAPRVQILSLGAGSDSLYFRLKATGSLELAGAAVWEVDFPEV
ARRKAARIREVPELCALTGPPVSREPPSALCFQSSDYRLLGLDLQQLERLDQALAEAALD
AAAPTLLLAEAVLTYLEPGSSKALITWAAQRFPDALFVVYEQMRPQDAFGQVMQQHFRQL
NSPLHGLDRFPDVEAQQRRFLQAGWTACTVMDMNEFYHRILPTQERCRIENLEPFDEFEE
WHLKCSHYFILAASQGDALSPVIVFPPSEAFTPVDPASPSGIFPASFVTSDGQGPDLKRF
GHASVLLSQGLILSTGGFGEQEGRHCRVSKFHLLSRDCSLEWKGSHIGSSRASTQWDGRL
YHTMTRLSDNHVLVLGGRLSPVTPALHSLHLCFGKSEDNSCLDLNVTISKAGPEEDSTLS
CWRHSATEVSYQNQKYLFVYGGRSVMAPVLSEWHFLHIRTMTWVKIPVEGEAPKGRHSHS
ACSWQGGTLIAGGLGASEEPLSSVFFLKPVSSGFLWESVVTQPPITPRYSHTGHVLNGKL
LLVGGVWIHSSSVPGVTVINLTTGLISEYHIDTTHVPWPLMLHNHTSVLLPEEQKILLLG
GGGNCFSFGTYFNPHTVSLDISSLSAEQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgcgaagccacaggcgtggggcgggggcagtgcagagcaccaacgacagcagc
gccctcagcaagcgctccctggccgcgcgcgggtacgtgcaagacgccttcgctcaattg
ctggtgccaggcgccgggcggcgcgcgccgctcatccaccgcggctactacgcacgcgca
cgcgccgtgcagcactgcgtggacgccttcctagagcgcatgcgcgcgcttcccggcgcg
ccgcgagtccagattctgtcactcggggccggctcggactcgctgtattttcgcctcaaa
gccaccggaagtctcgagctcgccggcgctgctgtctgggaggtggattttcccgaggtg
gcgaggcggaaagcggcccggattcgggaggtgccggagctgtgcgcgctcaccgggcct
cccgtcagtcgggagcccccgtcggccctgtgcttccagagctccgactaccgcctcctg
ggcctggacctgcagcagctcgagcgactggatcaagccttggccgaagcggccctggac
gctgctgcgcccactctgctcctggccgaagccgtattaacctacctggaacccggcagc
tccaaggcgctcatcacctgggccgctcagcgtttccccgatgcccttttcgtggtctac
gagcagatgaggccgcaggacgcctttggccaagtcatgcagcaacactttcgccagctg
aattccccccttcacggcctggaccgctttcccgacgtcgaggcccagcagcgccgcttc
ctgcaagcgggctggacagcctgcacggttatggacatgaacgagttctaccaccgcatc
cttcccacccaagaacgttgccgcatagaaaatctcgaacctttcgacgagttcgaggag
tggcatctgaagtgctcccactatttcattctggctgcttctcagggagacgcactctcc
ccggttatagtgtttccaccctctgaggcttttacaccggtagaccctgcttccccttca
gggatcttccctgccagtttcgtcaccagtgatggccagggcccagaccttaagagattc
ggccatgcctcagtgcttttgagccagggccttatcctcagcactggaggattcggagag
caggaggggcggcactgccgagtgagcaagtttcacttgctgtcaagagactgttccttg
gagtggaaaggcagccacataggcagtagcagagctagcactcagtgggatggacgcctt
tatcacactatgacaagactttcagacaatcacgttctggttctgggagggagactgtcc
ccagtaaccccggccctgcatagtctccacctttgttttggtaagagtgaggataatagc
tgcttggacctaaatgtcaccatatcaaaggctggtccagaagaagattccaccctgtct
tgttggcgacactcagcaacagaagtgtcataccagaatcagaaatatttatttgtatat
gggggtcgaagtgtgatggcacctgttttaagtgaatggcatttcctgcacatcaggaca
atgacttgggtgaagatcccggtggaaggggaagcccctaaaggtcggcattcccacagt
gcctgcagttggcaagggggaacccttatagctggagggctgggtgcttcagaggaacca
ctgagctctgtattctttctgaaaccagtctcttctgggttcctctgggaatcagtagtc
acacagcctcctattactccaaggtactcccacactggtcatgtgctaaatgggaagctt
ttactggttggaggagtctggattcattcctcctcagttcctggagtgactgttatcaac
ttgactacgggactgatctctgagtatcatattgacacaacacatgtaccgtggccatta
atgttgcacaaccatactagtgttctccttcccgaagagcaaaagatcctgctccttggg
ggtggtgggaactgcttttcctttggcacttactttaacccacatacagtgtcattagac
atttcttccttaagtgctgaacaataa
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