Suncus etruscus (white-toothed pygmy shrew): 126020929
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Entry
126020929 CDS
T09902
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr02010
ABC transporters
setr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126020929 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
126020929 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126020929 (ABCA2)
Transporters [BR:
setr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
126020929 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
126020929
NCBI-ProteinID:
XP_049638491
LinkDB
All DBs
Position
10:49032572..49053023
Genome browser
AA seq
2440 aa
AA seq
DB search
MGFLHQLQLLLWKNVTLKRRSPWVLAFELFIPLVLFFILLGLRQKKPTISVKEAFYTASP
LTSAGILPVMQSLCPDGQRDEFGFLQYANSTVTQLLERLSRVVEDGNLFDPVRPSLGSEL
ETLRQRLEALGSGPELGADAPGGPAESSFSLDSVARDPRELWRFLTQNLSLPNGTAEALL
AARVDLPEVHRLLFGPSPILDVGSGLSRARTPWGHLGSDHLLQMEELLLAPSLLEQLTCS
RGSRELGRILTAPQGHQDALQGYRDVVCSGQAMARTRHFTELAAELRDQLDTAKIAQQLG
LDTAPNGSVPQRQPPPPREMQALLEDLLGAQKILQDVDVLSALALLLPQGACAGRAPVGQ
ASGSGGTANSTGLGQSPGSNGSNSSAEEGAASSAAPASSDALQGQCSAFVQLWAGLQPIL
CGNNRTIEPEALRRGNMSSLGFTSKEQRNLGLLVHLMTSNPKILYAPAGSEADRVILKAN
ETFAFVGNVTHYAQVWLNISAEIRSFLEQGRLQRHLDWLQQSVAELRLHPEALDLSLEDL
PPALRQDNFSLPNSSALLQQLDTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQA
YQDNVTVFASVIFQTRKDGSLPPHLHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFL
YGFVWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWV
YSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGQV
LMHSHVLIIWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREE
VAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLAV
IMLVVDAVVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTEAWEWTWPWAHAPR
LSVMEEDQACAMESRHLEEMRGMEEEPTHLPLVVCVDKLTKIYKTDKKPALNRLSLNLYE
NQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLF
DRLTVEEHLWFYSRLKSMAQAEIRKEMEKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIA
FVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISH
GKLKCCGSPLFLKGAYGDGYRLTLVKKPAQPGDPQEPMLTSSPSGRAQLSCCSEPQVSQF
IRKHVGSCLLVSDTSTELSYILPSEAVKKGGFERLFQHLECSLDLLHLSSFGLMDTTLEE
VFLKVSEEDQSLENSEADMKESRKDAFPVTDRAVSGEAPAGNLAQSSELAQSQASLQSTS
SVGSARGDEATGSAGVYGDYRPLLDGLHDPDNVSLQEAEAEALTRVGQGSHKLDGWWLRV
RQFHGLLVKRFHCARRNSKALSSQILLPAFFVCVAMTVALSVPEIGDLPPLVLSPSQYHN
YTQPRGNFIPYANEERREYRLRLSPDASPQQLVSTFRLPSGVGATCVLKSPANGSLGPTL
NLSSGESRVLAARFFDSMCLESFTKGLPLSNFVPPPPSPAPSDSPMSPDDDPLQTWNSSL
PPTSGPENWTSAPALPHLVREPVRCICSSQGTGFSCPGGVGGHPPQMRVVTGDILMDITG
HNVSEYLLFTSDRFRLHRYGAITFGNVQKSIPASFGARAPAMVRKIAVRRAAQVLYNNKG
YHSMPTYLNSLNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIA
IFIIVAMSFVPASFVVFLVAEQSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCV
IILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFLIVINLFIG
ITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQ
FDKMKSPFEWDIVTRSLVAMTVEGFVGFFLTIMCQYNFLRQPQRMPVSTKPVEDDVDVAS
ERRRVLRGDADNDMVKIENLTKVYKSRKLGRILAVDRLCLGVRPGECFGLLGVNGAGKTS
TFKMLTGDESTTGGEAFVNGHSVLRELLQVQQSLGYCPQFDALFDELTAREHLQLYTRLR
GIPWKDEKQVVKWALEKLELTKHADKPAGTYSGGNKRKLSAAIALIGHPSFIFLDEPTTG
MDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNR
FGDGYMITVRTKSSHSVKDVVRFFNRNFPEAVLKERHHTKVQYQLKSEHISLAQVFSKME
QVMGVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQETEPPSGLQSPLGRLLSLFRPRPA
PTELRALVTEEPEDLDTEDEGLISFEEERAQLSFNTDTLC
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcttgcaccagctgcagctgctgctctggaagaacgtgacgctgaagcgccgg
agcccgtgggtcctggcctttgagctcttcatccccctggtcctgttcttcatcctgctg
ggcctgaggcagaagaaacccaccatctccgtgaaggaagccttctacacagcctcacct
ctcacctccgcgggcatcctgccagtgatgcagtccctgtgccctgatggccagcgggac
gagttcggcttcctgcagtatgccaactccacggtcactcagctgctggagcgcctgagc
cgcgtggtggaggacggtaacctgtttgatccggtgcggcccagcctgggctcagaactc
gagactctccgtcagcgcctcgaagccctgggctcgggcccagagctgggagctgatgcc
cccgggggccctgcagagtcatccttctcactggactcagtggcccgagatccacgggag
ctgtggcgtttcctaacacagaacctgtcgctgcccaatggcacagccgaggccctcctg
gctgcgcgtgtggacctgcctgaggtgcatcgcttgctgtttggcccttcacctatcctg
gacgtagggtcgggcctctccagggctcggacaccctggggccacctaggcagcgaccac
ctgctccagatggaggagctgctgctggcgccttcactcctggagcagctgacgtgctca
cggggctccagggagctgggccgcatcctcactgcaccgcagggtcaccaggatgctctg
cagggctaccgggatgtggtctgcagtggacaggccatggcccgcacccggcactttaca
gagttggctgccgagctccgggaccagctggacacagccaagattgcccagcagctgggc
ctggacacagccccaaatggctcagtgccccaacgtcagccaccacccccacgggagatg
caggcactgctggaggatctgctgggtgcccaaaagatcctgcaggatgtagatgtcctc
tcagcccttgctctgctgctgccacagggtgcctgtgctggccgggctccagtgggccaa
gccagtggctctgggggcacggccaacagcacggggctgggccagagtcctggttccaat
ggttccaacagctcagccgaggagggagcagcatcctctgctgcccctgcctcctcggac
gccctgcagggccagtgctcggctttcgtgcagctgtgggccggcttgcagcccatcctc
tgtggcaacaaccgcaccattgagcccgaagccctgcggaggggcaacatgagctcactg
ggcttcacgagcaaggagcagcggaatctgggccttctggtgcacctcatgaccagcaac
cccaagatcctgtacgcgcctgcaggttcagaggctgaccgggtcatcctcaaggccaac
gagacctttgcctttgtaggcaatgtgacgcactatgcccaagtctggcttaacatctcg
gcagagatccgcagctttctggagcagggccggctgcagaggcatttggattggctgcag
cagtcagtggcagagctgaggctgcacccagaggcactggacctgtctctggaggatctg
ccacctgccctgcgccaggacaacttctccctgcccaacagctctgccctgctgcagcag
ctggacaccattgacaacgctgcctgtggctggattcagttcatgtccaaggtgagcgtg
gacatcttcaagggttttcctgatgaggagagcatcgtcaactacacgctcaaccaggcc
tatcaggacaacgtcaccgtgtttgccagtgtgatcttccagactcgaaaggacggctcc
ttgccaccccacctccactacaagatccgccagaactcgagcttcacggagaaaaccaat
gagatacgccgggcctactggcgcccggggcccaacacaggcggccgattctacttcctg
tatggcttcgtctggatccaagacatgatggagcgtgccatcatcaatacctttgtgggg
catgatgtggtggagccgggcaactacgtgcagatgttcccttacccctgctacacacgg
gatgacttcctgtttgtcatcgagcacatgatgcccctgtgcatggtcatctcctgggtc
tactctgtggccatgacgatccagcacatcgtggctgagaaggagcatcgcctcaaggag
gtgatgaagacgatgggcctgaataatgcagtgcactgggtggcctggttcatcacgggc
tttgtgcagctgtccatctcggtgacggcgcttactgcaatcctcaagtacggccaggtg
ctcatgcacagtcatgtgctcatcatctggctcttcctggccgtgtatgctgtagccacc
atcatgttctgcttcctggtgtcagtgctgtattccaaggccaagctggcctcggcctgt
ggtggcatcatctacttcctgagttacgtgccctacatgtatgtggccatccgagaagaa
gtggcccacgacaagatcacagccttcgagaagtgcattgcgtccttgatgtccaccact
gcctttggtctgggctccaagtacttcgccctgtatgaggtagcaggcgtgggcatccag
tggcatacgtttagtcagtcgcccgtggagggagacgactttaacctgctgctggccgtc
atcatgctggtggtggatgctgtcgtgtatggggtgctcacatggtacatcgaggcagtg
cacccaggcatgtatgggctgccccgaccctggtacttcccgctgcagaagtcctactgg
ctgggcagtgggcgaacagaagcgtgggaatggacctggccctgggctcatgccccccga
ctcagtgtcatggaagaagaccaggcctgtgccatggagagccggcacttggaggagatg
cgtggcatggaggaagagcctacccacttgcccctggtggtatgcgtggacaagctcacc
aagatctacaagacggacaagaagccggccttgaacaggctaagcctgaacctctacgaa
aatcaggtggtctccttcctgggtcacaacggggctggcaagaccaccaccatgtccatc
ctgaccggcctgttcccacccacatcgggatcagctaccatctacgggcacgacatccgc
acagaaatggatgagatccgcaagaacctgggcatgtgccctcaacacaatgtgctcttc
gatcggctcacggtggaggagcacctgtggttctactcccggctgaagagcatggcccag
gcggagatccgcaaggagatggagaagatgatcgaagacctggagctgtccaacaaacgg
cactcgctggtgcagaccctgtcaggtggcatgaagcgcaaactgtcggtggccattgcc
tttgtaggcgggtctcgggccatcatcctggacgagcccacggcgggggtggacccctat
gcgcgccgcgccatctgggacctcatcctcaagtacaagcctggtcgcaccatcctcctg
tccacccaccacatggacgaggccgacctgctgggggaccgcatcgccatcatctcccat
gggaagctcaagtgctgtgggtccccactcttcctcaagggcgcctacggcgatggctac
cgcctcacgctggtcaagaagccagcccagcctggggatccccaagagccaatgctgaca
tcaagcccttcgggtcgagcccagctgagctgctgctctgagccccaagtctcccagttc
atccgcaagcatgtgggttcctgcctactggtctcagacaccagcacggagctctcctat
atcctgcctagtgaggctgtcaagaaggggggctttgagcgcctcttccagcacctggag
tgcagtttggacctgctgcacctgagcagcttcgggctgatggacacgacactggaggag
gtgttcctcaaggtgtctgaagaggaccagtctctggagaacagtgaggcagatatgaag
gagtccaggaaggatgcatttcctgtgaccgacagagctgtctcaggggaggcaccagcg
ggcaacctagcccaaagctcggagctggcacagtcgcaggcgtccctgcagtccacgtcc
tcggtgggctctgcccgtggcgatgaggccactggctctgcaggtgtctacggcgactac
cggccgctcttggatggccttcacgacccggacaacgtcagtctgcaagaggctgaggct
gaggcactcacacgagtgggccaaggcagccacaagctggacggctggtggctgagagtg
cgccagtttcatgggctgctggtgaagcgattccactgtgcccgccgcaactccaaggca
ttgtcctcccagatcctgctgcctgccttctttgtctgcgtggccatgaccgtggccctc
tctgttcccgagatcggggacttgcccccgctggtcctgtcgccctcccagtaccacaac
tacactcagcctcgtggcaacttcatcccctatgccaatgaggagcgccgggagtaccgg
ttacggttgtcgcccgatgccagcccccagcagctggtgagcactttccggctaccatct
ggtgtgggggccacctgcgtgctgaagtctccagccaatggctcgctgggccccaccctg
aacctgagcagtggcgaatcccgagtgctggccgctcgcttcttcgacagcatgtgcctg
gagtccttcacaaaggggctgccactgtcgaacttcgtgcccccgccgccctcccctgcc
ccttccgactcacccatgtcccctgatgacgaccccctgcagacctggaactcctcgctg
ccacccacatcagggccagagaactggacctccgcacccgcccttccccacctggtgcgg
gagcccgtgcgctgcatctgctcgtcgcagggcactggcttctcttgccctggaggcgtg
gggggacaccccccacagatgcgtgtggtcactggggacatcttgatggacatcactggc
cacaatgtctctgagtacctgctcttcacctctgaccgcttccgactgcaccggtatggg
gcaatcacgttcggcaacgtgcagaagtccatcccggcgtcatttggcgcccgagcaccg
gctatggtgcgaaaaatcgcagtgcgccgggcagcacaggtgctctacaacaacaagggc
taccacagcatgcccacctacctcaacagtctcaataacgccatccttcgcgccaacctg
cccaagagcaagggcaatccagcagcctacggcattactgtcactaaccaccccatgaac
aagaccagcgccagcctttccctggattacctgttgcagggcaccgatgtagtcatcgcc
atcttcatcattgtggccatgtccttcgtgccagcaagctttgtggtcttcttggtggcc
gagcagtccaccaaggccaaacacctgcagttcgtcagcggctgcaaccccgtcatctac
tggctcgccaactacgtgtgggacatgctcaactacctggtcccagccacctgctgtgtc
atcatcctgtttgtgtttgacctgccagcctacacttcccctaccaacttcccagcagtg
ctctctctcttcctgttgtatgggtggtccatcactcccatcatgtacccagcctccttc
tggttcgaggtgcccagctcagcctacgtgttcctcattgtcatcaacctcttcattggc
atcacagccaccgtggccacgtttctgctacagcttttcgagcacgacaaggacctgaag
gtggtcaacagttacctgaaaagctgctttctcatcttccccaactacaacctgggccat
gggctcatggagatggcctacaacgagtacatcaacgagtactatgccaagatcggccag
ttcgacaagatgaagtcccctttcgagtgggacatcgtcacccggagcctagtggccatg
acggtggagggctttgtgggcttcttcctcaccatcatgtgccagtacaacttccttcgg
cagccacagcgcatgccagtgtccaccaagcccgtggaggatgatgtggatgtggccagt
gagcgtcggcgtgtgctccgaggggatgcagacaacgacatggtcaagatcgagaatttg
accaaggtctacaaatctcggaagctgggccgcatcctggccgtggaccgactgtgtctg
ggcgtgcggcccggggaatgctttgggctcctgggtgtcaatggagcaggcaagaccagc
accttcaagatgctgacgggcgacgagagcacgactgggggcgaggcctttgtgaacggg
cacagtgtgctcagggagctactgcaggtacagcagagccttggctactgcccccaattt
gacgccctgttcgacgagcttacggcccgtgagcacctgcagctctacacgaggctccgg
gggatcccctggaaggatgagaagcaggtggtaaagtgggctctggagaagctagagctg
accaagcacgccgataagccggccggcacctacagcggtggcaacaagaggaagctgtcg
gccgccattgccctcattggccacccgtccttcatcttcctggacgagcccactacaggc
atggaccccaaagcacggcgcttcctctggaatctcattctggacctcatcaagaccggg
cgctccgtggtgctaacatcacacagcatggaggaatgcgaggccctgtgcacgcgcctg
gccatcatggtgaacgggcggctgcgctgtctgggcagcatccagcacctgaagaaccgg
tttggcgacggctacatgatcaccgtgaggaccaagagcagccatagtgtgaaggatgtg
gtgcgcttcttcaaccggaacttccccgaggcggtgctcaaggagcggcaccacacgaag
gtgcagtaccagctcaagtcggagcacatctcgctggcacaggtgttcagcaagatggag
caagtgatgggggtgctgggcatcgaggactactcagtcagccagaccaccctggacaat
gtgtttgtcaacttcgccaagaaacagagcgacaacctggaacagcaggagacggagcca
ccctctggcctgcagtcccccttgggccggctgctgagcctgttccggccgcgccctgca
cccacagaactccgtgctctggtgactgaggagcccgaggacctggacacagaggatgaa
ggcctcatcagcttcgaggaggagcgggcccagctctccttcaacacagacacgctctgc
tga
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