Suncus etruscus (white-toothed pygmy shrew): 126021521
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Entry
126021521 CDS
T09902
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
setr01001
]
126021521 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126021521 (TRIM24)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126021521 (TRIM24)
Protein kinases [BR:
setr01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
126021521 (TRIM24)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126021521 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
126021521
NCBI-ProteinID:
XP_049638606
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All DBs
Position
1:147970426..148064135
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AA seq
942 aa
AA seq
DB search
MGSQTRGLWAFAALVGVIRCPVCSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCE
DNSEANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHK
KEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKFT
GNQIQNRILEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRTKLMQQQQ
EVAGLSKQLEHVMHFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDASPVTNNTIQFH
CDPSFWAQNILNLGSLVIEDKESQPQMPKQNPVVEQNSQPPGGLSSNQLSKFPTQISLAQ
LRLQHMQQQVMAQRQQVQRRPAPVGLPNPRMQGPIQQPSISHQQPPPRLINFQNHNPKPN
GPVLPSHPQQLRFPPSQNMPRQTVKPNPLQMAFLAQQAIKQWQISSGHAAPSTASSTSST
PSSPTITSAAGYDGKAFGSPMIDLSSPVGGPYNLPSLPDIDCSSTIMLDNIVRKDTSIDH
GQPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPTGAD
STHKVPVVMLEPIRIKQENSGPPENYDFPVVIVKQESDEESRPQNTNYPRSILTSLLLNS
NQNSTSEESVPRSDAPDSTGDQPGLQQENPSNGKPEWLDASQKSPLHGETRKEDDPNEDW
CAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDLSKPEVEYDCDAPSHS
SEKRKNEGLTKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSAI
KKRLHEDCSIYTKPEDFVADFRLIFRNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEK
RFPKLEFRNESEDNKFSDDSDDDFVQPRKKRLKSIEDRQLLK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggggtctcaaactcgcggcctgtgggcctttgcggccctcgttggagtcattcgctgt
ccagtttgcagccaagaatgtgcagagagacacattatagataatttttttgtgaaagac
actactgaggttcccagtagtacagtagaaaagtctaatcaggtgtgtacaagctgtgaa
gacaattcagaagctaatggattttgtgtagagtgtgttgagtggctctgcaagacctgt
attagagctcatcaaagggtgaaattcacaaaagaccatactgtaagacagaaggaagaa
gtgtctccagaggcagttggtgtgaccagtcagagaccagtgttttgtccttttcataaa
aaggagcaactgaaactttactgtgaaacatgtgacaaactgacatgtcgggattgtcag
ttattagaacataaagagcacagataccaatttatagaagaagcttttcaaaatcagaaa
gtaatcatagatacactaatcaccaaattgatggaaaaaacaaagtatataaaattcaca
ggaaatcaaatccaaaacaggatacttgaagtaaatcaaaatcaaaagcaggtggaacaa
gatattaaagttgctatatttacattgatggtagaaataaataaaaaaggtaaagctcta
ctacaccagcttgagagccttgcaaaggaccatcgcacaaaacttatgcaacaacaacaa
gaagtagctggactttctaaacagttggaacatgtcatgcatttttctaaatgggctgtt
tccagtggcagcagtacagcattactgtatagcaagaggctgattacataccggttacgg
tacctacttcgagcaaggtgtgatgcttccccagtgaccaacaataccatccagtttcac
tgtgatcctagtttctgggctcaaaatattctcaatttaggttctttagtaattgaagat
aaagagagtcagccacaaatgcctaagcagaatcctgtcgtggaacagaattcacagcca
ccaggtggtttatcttcaaaccagttatccaagttcccaacacagatcagcctagctcaa
ttacgactccagcatatgcagcaacaggtaatggctcagaggcaacaggtgcaacggagg
ccagcacctgtgggtttaccaaaccctagaatgcaggggcccatccagcaaccttccatc
tctcatcagcaaccccctccacgtttgataaattttcaaaatcacaaccccaaacccaat
ggaccagttcttccttctcatcctcaacaactgagatttccaccaagccagaatatgcca
cgacaaacagtaaagcccaaccccttacaaatggctttcttggctcaacaagccataaaa
cagtggcagatcagcagtgggcatgctgccccatcaactgccagtagcacatcctctact
ccttccagtcccaccatcactagtgcagctggatatgatgggaaggcttttgggtcacct
atgattgacttgagctcaccagtgggaggtccttataaccttccctctcttccagatatt
gactgttcaagtacaattatgctggacaatattgtgcgaaaagatactagtatagatcat
ggacagccaagaccaccatcaaacagaacggtccagtcaccaaattcatcggtaccatct
ccaggtcttgcaggtcctgttacaatgactagtgtccacccaccaatacggtcccctagt
gcctccagtgttggtagccgaggaagttctggctcttccagcaaaccaacaggagctgat
tccacacacaaagtcccagtagtcatgttggaaccaattcgaataaaacaggaaaacagt
gggcctcctgaaaattatgattttcctgttgttatagtgaaacaagaatcagatgaagaa
tctagacctcaaaataccaactatccaagaagcatacttacctccctcctcctaaatagt
aatcagaactcaacttctgaagagtcagtcccaagatcagatgctcctgatagcacagga
gatcaacctggacttcagcaggaaaatccttcaaatggaaaacctgagtggctggatgcc
tctcagaagtcgccacttcacggagagacgaggaaagaggatgatcccaacgaggactgg
tgtgcagtttgtcagaatggaggggaactcctgtgctgtgaaaagtgtcccaaagtattc
catctatcctgtcatgtgcccactttggcaaactttccaagtggagagtggatttgcact
ttttgtcgagacttatctaaaccagaagttgaatatgattgtgatgctcctagtcacagc
tcagaaaaaaggaaaaatgaaggtcttactaaattaacaccaatagataaaaggaagtgt
gagcgcctacttttatttctttattgtcatgaaatgagcctggcttttcaagacccagtt
cctctaactgtgcctgattactacaaaataattaaaaatccaatggacttgtcagccatc
aagaaaagattacatgaagattgttccatatatacaaagcctgaagattttgttgctgat
tttagattgatctttcgaaactgtgctgaattcaatgagcctgattctgaagtagccaat
gctggtataaaacttgaaagctattttgaagaacttctaaagaacctatatccagaaaaa
aggtttcctaaactagaattcagaaatgaatcagaagataataaatttagtgatgactca
gatgatgactttgtacagccccggaagaaacgccttaaaagcatagaagaccgccagttg
cttaaatag
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