Suncus etruscus (white-toothed pygmy shrew): 126021813
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Entry
126021813 CDS
T09902
Symbol
TJP1
Name
(RefSeq) tight junction protein ZO-1
KO
K05701
tight junction protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04382
Cornified envelope formation
setr04520
Adherens junction
setr04530
Tight junction
setr04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
126021813 (TJP1)
04530 Tight junction
126021813 (TJP1)
04540 Gap junction
126021813 (TJP1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126021813 (TJP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126021813 (TJP1)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
126021813 (TJP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
ZU5
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
DUF6288
SH3_1
Motif
Other DBs
NCBI-GeneID:
126021813
NCBI-ProteinID:
XP_049638621
LinkDB
All DBs
Position
11:complement(1905034..2045868)
Genome browser
AA seq
1772 aa
AA seq
DB search
MRRRRRRRRWRRGAATMKYQKYLPVLQMALGVTPSNRGSLLPLKRRFWVTPSSENPHGAT
ASGSQGKPSLRRIKGRLHQSKSLDSIDFCELATTVMEETAIWEQHTVTLHRAPGFGFGIA
ISGGRDNPHFQSGETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAFAVQQLRK
SGKNAKITIRRKKKVQIPVTRPEPEPVSENDEDSYEEDVRDARGSRAAPGNRRSDKSWAR
DRSASRDRSLSPRSDRRSLSSSQPPKPTKVTLVKSRKNEEYGLRLASHIFVKEISQDSLA
ARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSRGKLKMVVQRDERGTLLNVPDLSDS
IHSANASERDDISEIQSLASDHSGRSHDRPARHSRSRSPDQRSEPSEPSRHSPPQPSNGS
LRSREDERNSKPGAISTPVKHIDDPAPKMVEEVRVERNEKQVPTLPEPKPVYAQVGQPDV
DLPVSPSDGLLSNSAHEDGILRPSMKLVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAA
KEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGD
SFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNK
NRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAYERVV
LREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGIIRLHTIKQI
IDQDKHALLDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYER
SHKLRKNNHHLFTTTINLNSMNDGWYGALKDAIQQQQNQLVWVSEGKADGATSDDLDLHD
DRLSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETLNDEALPLPGHRLDSP
GFKAPSLQTAEASSVAPSLSPDTNPPPPASGWVYPEEPTPAPAATQPPPAAFRGPHAEAA
PTFGPPEPSVSLHADPAQVYRKDPYSEELLRQNHILKQSAGGRAGQRPDREPGVGHGLEP
PSLYTEKPAGREPELAVPRYEGGYAEPGTRGYDPRCEDHWAYLDDRQSRLPRPPFEAPHP
RDLDARPHPGEPSEHPYFPHFEEPAPLPYDSRARFEQLPRTSTLRPEEVPSRFRPEAQTY
AAVGPKAPEPKPPLEQFPRGYEQAPAQTLPVKATHYEPVHGTGLPVTPPRPDGPPAGAKP
LPPLPASAATPEEEEDPAMKPQSVLTRVRMFEKKRSVSLESRKDENHLAGVKSVEAVSRP
VAAPVAAPKATLQNQLSDHDKPLYSRIPEPQKAHPKPPEDIVRSSLCDPEDDEEYYRKQL
SYFDRRGFDSKPTHLPASHGPEPAKPAHPHPQTMPGFSSYTSKGKSPEAEAVERPFGEKR
PEPLQPAPPPPPLPSQYTPASSLTFHTLTKGVHSEGSSVSLELPNSLAAKPEPPPAQLKP
AIFRAPSRDAAAFFPPKSGSSDKAPVNGAEPAHKAPAYNRFTAKPYTSSARPFERKFESP
KFNHNLLPSEPAPKPDLSPKAPSSAQPADFDSGVETFSLHADKPKYQLNSVSAVPRAMPV
SPSAVEEDEDEDGHTVVATARGVFNSNGGVLSSIETGVSIIIPQGAVPEGVEQEIYFKVC
RDNSLLPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSS
AGDPKTWQNKCLPGDPNYLVGANCVSVLIDHF
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcggcgacggcggcggcgttggcggcggggcgcggccaccatgaagtaccag
aagtacctgccggtgctgcagatggcgctgggcgtgaccccgtccaaccgcggcagcctc
ctgcccctcaagcgccggttctgggtcacgccatcctctgaaaatcctcacggtgctact
gctagtgggagccaaggcaaaccttcgttacggcgtattaaaggccgcttgcaccagagc
aagagcctcgacagcatcgacttctgtgaactcgctaccacagtcatggaggaaacggcc
atctgggagcagcacacggtgacgcttcacagggctcctgggtttgggtttggaatcgcc
atatccggcggaagagataacccccatttccagagtggggagacctccatcgtgatctcg
gatgtgctgaaaggcggcccggcagaagggcagctccaggagaatgaccgagtcgcaatg
gtcaatggagtctcaatggacaacgtcgaacacgcctttgcagttcagcagctgagaaaa
agtggcaaaaacgcaaaaatcaccattcggaggaagaagaaggtgcagatccctgtgacc
cggcctgagcccgagcccgtgtcagagaacgacgaggacagctacgaggaggacgtgcgg
gatgcccgtggcagccgcgctgcaccagggaaccgcaggagcgacaagagctgggcaagg
gacaggagtgccagcagggaccggagcctgtccccgcgctctgaccggcgctccttgtcc
tccagccagccccccaagcccaccaaagtcacgctggtgaagtcccggaagaatgaagag
tacgggctccgactggccagccacatctttgtgaaggagatctcccaggacagcttggca
gcaagagatggcaacatccaggaaggagacgttgtgctcaagatcaacgggactgtgaca
gaaaacatgtccctgacagacgcgaagacgttgatagaaagatccagaggcaagttgaag
atggtggtccagcgagatgagcggggaacgctgctgaacgtgcccgacctatccgatagc
atccactcagccaatgcttccgagcgtgatgacatttccgagatccagtccctggcctca
gaccattctggccgctcccatgaccgacccgcccgccacagccgctcacgctctccggac
cagcgctccgagccctccgagccttcccgccactctccgccgcagcccagcaacggcagt
ctccggagcagagaggatgagaggaattctaaaccgggcgccatctccacgcccgtcaag
cacatcgatgatccggcccccaaaatggtagaagaagttcgagttgaaaggaatgagaaa
caagtacccacacttccagaaccaaagcctgtgtatgctcaagttggccagcccgacgtg
gacttacctgtcagcccttctgatgggcttctgtccaattccgcgcacgaagacgggatt
ctgcggcccagcatgaaactggtgaaattcaggaaaggagacagcgtgggtttgcggctg
gctggagggaatgacgttggaatcttcgtcgctggtgttctggaggacagccccgcagcc
aaggaaggcctagaggagggcgaccagattctcagggtcaacaacgtggacttcacgaac
atcatccgtgaggaagcggtgcttttcctgctggacctccccaaaggagaggaagtgacc
atcctggctcagaagaagaaggacgtctaccgccgcatcgttgagtccgatgttggagac
tctttctacattcggacccatttcgagtatgaaaaggagtctccctacggcctgagcttc
aacaagggcgaggtgttccgtgtggtagataccttgtacaatgggaagctgggctcctgg
ctcgccattcgcatcggcaagaaccacaaggaggtggagcgaggcatcatccctaacaag
aacagggccgagcaactggccagtgtgcagtacacgcttcccaagacggctggcggcgac
cgcgccgacttctggcgcttccggggcctccgaagctccaagaggaacctccggaagagc
cgggaggacctgtccgctcagccggttcagaccaagttccctgcgtacgagagagttgtt
cttagagaagctggatttttgagacccgtcaccatctttggacccatagcggatgtcgcc
agagaaaaactggccagagaagagccagatatttaccagattgcaaaaagcgaacctcgg
gatgccgggactgaccagcgtagctcgggcatcatccgccttcatacaatcaagcagatc
atagaccaggacaagcatgctctgttggacgtcaccccaaatgctgtggaccgtctgaat
tacgcccagtggtacccgatcgtggtcttcctgaaccccgactcgaagcaaggtgtcaag
accatgcggatgcggctctgtcccgagtctcggaaaagtgcccggaagttgtacgagcgc
tctcataaactccgcaagaacaaccaccatcttttcacaaccacgatcaacctgaattcg
atgaatgacggctggtacggagcgctgaaggatgctatccagcaacagcagaaccagctg
gtgtgggtctctgagggcaaggcggacggtgccacaagcgatgaccttgacttgcatgac
gatcggctgtcctacctgtcagccccgggtagcgagtactcaatgtatagcacagacagc
agacacacgtctgactatgaagacacagacacagaaggcggggcctacactgatcaagaa
ctagacgagacccttaatgatgaggcgctgccgctgcccggccataggctagactccccc
ggatttaaagcaccctcgctgcagacagcagaagcctcgtccgtggccccctccctctcg
cctgacacaaaccctccgccccctgcctccgggtgggtgtaccccgaggagcccaccccg
gctcctgccgccacacagcccccgccagctgctttccgagggccccatgccgaggccgct
cccacattcggacccccggagccgtccgtgtctctgcatgcagacccggcccaggtctac
aggaaggacccctactccgaggagctgctgaggcagaaccacatactgaagcagtcggcg
ggcggccgtgctgggcagaggcccgacagggagccgggtgtgggccatgggctggagccc
ccgagcctgtacactgagaagccggccggcagggaaccggagctggctgtgcccagatat
gagggtggctacgccgagcctggcacccgaggctacgacccacgctgcgaggatcactgg
gcctacctggatgaccggcagtcccgcttgccgaggccgccctttgaggcgccacacccg
cgggacctcgacgcccggccacaccctggcgagccctcagagcacccctacttcccccac
tttgaggagcctgcgccgctgccctacgacagtcgtgcccgcttcgagcagctgcccaga
acctccaccctccgtccggaggaggtacccagcaggttccggcctgaagcccaaacctat
gcagccgtgggccccaaggccccagaaccgaagccacctctggagcagttcccccggggc
tacgagcaggcgcccgcccagacgctgccggtgaaagcgacccactacgagcctgtccac
ggcacaggccttcccgttacaccgccccggccggatgggccccctgccggcgccaagccc
ctgccgccactgcctgcctccgccgccacccccgaggaggaggaggacccagccatgaag
ccgcagtcggtgctcacacgagtgcggatgtttgagaaaaaaaggtccgtgtcgctggag
agccggaaggacgagaaccacctggccggcgtgaagtctgtagaggcggtgtccagacct
gtcgcagcccctgtcgctgctccaaaagccactttgcagaaccagctgagtgaccatgac
aagcccctgtacagcagaatcccggagcctcagaaagcccacccgaagccccccgaggac
atcgtgcggtcgtcgctctgtgaccccgaggacgatgaggagtactaccggaagcagctc
tcctacttcgaccgcaggggcttcgacagcaagcccacccacttgcctgccagccatggc
ccggagccggccaagcctgcccacccgcacccacaaacgatgccgggtttctccagctac
acctccaagggcaagtctcctgaggctgaagccgtagagcgacccttcggtgagaagcgc
ccggagcccctgcagcctgcacccccgcccccgcccctgccgtcgcagtacacgcctgcc
tcgagcctcaccttccacacactcaccaagggagtccacagcgaagggagctccgtctcg
ctggagctgccgaactccttggcggccaagcccgagccgccccccgctcagctcaagccg
gccatcttccgcgcccccagccgcgacgccgccgccttcttccctcccaagagcggctcc
tcagacaaggcgcctgtgaatggggccgagcccgcacacaaggcacccgcgtacaaccgc
ttcaccgccaagccctacaccagctccgcgcgccccttcgagcgcaagttcgagagcccc
aagttcaaccacaacctcctgcccagcgagcccgcccccaagcctgacctgtcccccaag
gctcccagctccgcgcagcccgccgacttcgacagtggcgtggagaccttctctctgcat
gccgacaagcccaagtaccagctcaacagcgtcagcgccgtgcccagggccatgcccgtg
agcccttccgccgtggaggaggacgaggacgaagacgggcacacggtggtggccaccgcc
cggggcgtcttcaacagcaacggcggggtgctgagctctatcgagacaggcgtgagcatc
atcatcccccagggcgccgtgcccgagggcgtggagcaggagatctacttcaaggtctgc
cgcgacaacagtctgctgcccccgctggacaaggagaagggcgagaccctgctgagcccc
ctggtgatgtgcgggccacatggcctcaagttcctgaagcccgtggagctgcgcctgccg
cactgcgcctccatgactcctgacggttggtcttttgctctaaaatcgtccgactcctcg
gcgggtgacccgaaaacttggcagaacaagtgtcttcccggagaccccaactatctcgtg
ggcgccaactgtgtctccgtcctgattgaccatttttaa
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integrated database retrieval system
