Suncus etruscus (white-toothed pygmy shrew): 126021816
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Entry
126021816 CDS
T09902
Symbol
CYFIP1
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04810
Regulation of actin cytoskeleton
setr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
126021816 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
126021816 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126021816 (CYFIP1)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126021816 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
126021816 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
126021816
NCBI-ProteinID:
XP_049638623
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All DBs
Position
11:complement(4424330..4473321)
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AA seq
1253 aa
AA seq
DB search
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIAGYEELLAD
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMLQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDSAEEYERATRYNYSSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS
LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL
ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS
IYGNYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLVEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLRVQKHDGKDEIIKNVP
LKKMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccaggtcaccctggaggatgccctgtccaacgtggatctgctggaggagctg
ccgctgccagaccagcagccctgcatcgagccgccaccctcctcgctgctctatcagccc
aacttcaacaccaactttgaggatcgaaatgcctttgtcacgggcatcgcgagatacatc
gagcaggccacggtccactccagcatgaatgagatgctagaagaaggccaagagtatgcc
gtcatgctgtacacctggaggagctgctcccgcgccattccgcaggtgaaatgtaatgaa
cagcccaacagagtggaaatctatgagaaaaccgtggaagtcttggagcccgaggtgacc
aagctgatgaacttcatgtacttccagagaactgccatcgagcgcttctgtggggaggta
cggcggctgtgccatgctgagcgcagaaaggacttcgtgtctgaggcctatctgatcacg
ctgggcaagtttatcaacatgtttgccgtactggacgagctcaagaacatgaagtgtagc
gtcaagaatgaccactcggcctacaagagggctgcccagttcctgcggaagatggccgac
ccacagtctatccaggagtcgcagaatctctccatgttcctggccaaccacaacaagatc
acacagtctctgcagcagcagctggaggtgatcgccggctacgaggagctgctggccgac
atcgtgaacttgtgcgtggattattacgagaacaggatgtacctgacgcctagtgagaag
catatgctgctcaaggtcatggggttcggcctgtacttgatggacgggagtgtcagcaac
atttacaagctggatgccaagaaaaggatcaacctgtccaagatcgacaagtatttcaag
cagctccaggtggtcccgctgttcggagacatgcaaatagaactggcaagatacatcaag
accagcgcccactacgaggagaacaaatcccggtggacctgcacatcgtccagcagcagc
ccccagtacaacatctgtgagcagatgctgcagatccgcgaggaccacatgcgcttcatc
tcggagctggcgcgctacagcaacagcgaggttgtcacgggctcaggccgccaagaagcc
cagaagacagacgctgagtaccggaagctgttcgacctggcactgcagggcctgcagctg
ctgtcccagtggagtgcccatgtcatggaagtgtactcgtggaagctggtgcacccaacg
gacaagtactccaacaaggactgcccagacagtgctgaggagtatgaacgggccacgcgc
tataactacagcagcgaggagaaatttgcgcttgtggaggtcatcgccatgatcaaagga
ctgcaggtgctcatgggaaggatggagagcgtgttcaaccacgccatccgccacactgtc
tacgcggcgctgcaggacttcgcccaggtcacgctcagggagccgctgcgtcaggccatc
aagaagaagaagaacgtcatccagagtgtcctgcaggccatccggaagacggtgtgtgac
tgggagacgggccacgagcccttcaacgaccctgcgctgcgtggggagaaagaccccaag
agtggctttgacatcaaagtgccccgtcgcgccgtgggaccgtccagcacgcagctttac
atggtgcgaaccatgcttgagtccctcattgcggacaaaagcggttccaagaaaaccttg
cggagtagcctagaaggacctactattttggacatagaaaaattccaccgcgagtccttc
ttctacacgcacttgataaattttagcgagacgctacagcagtgctgtgacctctcgcag
ctgtggtttcgcgaattctttctggaactcaccatgggccggaggatccagttccccatt
gagatgtccatgccttggatcctcactgatcacatcctagagaccaaggaggcgtccatg
atggagtatgtcctgtactccctggacctatacaacgacagcgcccactatgcgctcacc
cggttcaacaagcagttcttgtacgatgagatcgaagctgaggtgaatctgtgctttgac
cagttcgtctacaagctggcagaccaaatattcgcctattacaaggtcatggctggcagt
ttgctgctagataagcggctgcggtccgagtgcaagaaccagggtgccaccatccacctg
ccgccgtccaaccgctacgagacgctgctcaagcagagacacgtgcagctcctgggccgg
tccatagacctcaatcgtctcattacccagcgcgtctcagccgccatgtacaagtctctg
gaactggcaatcggacggtttgagagcgaagacctgacttcaatagtggagctggatggt
ttgttggaaatcaaccgtatgacccacaagttgctgagccggtacctgaccctggacagc
ttcgacgccatgttccgggaagccaatcacaatgtgtcggcgccctatggacgaatcaca
ctccatgtcttctgggagctcaactacgacttcctgcccaactactgctacaatggctcc
accaaccggtttgttcggacagtattaccgttttctcaagagttccaaagagataagcag
cccaatgcacaacctcagtatttgcatggatcaaaggcactgaacctggcctactccagc
atctacggcaactaccggaactttgtggggccaccccacttccaggtcatctgcaggctc
ttgggctatcaaggaattgccgtggtcatggaggagctgctgaaggtggtcaagagcctg
cttcagggcaccatcctgcagtatgtgaagacgctgatggaggtgatgcccaagatatgc
cgcctgccacgtcatgaatatggctccccaggtatcctggagttcttccaccaccagctg
aaggacatcgtagagtatgctgaactcaagaccgtatgtttccagaaccttcgggaggtg
ggcaacgctgtactcttctgcctgctggtggagcagagcctgtcgctggaggaagtgtgt
gacctgctacatgctgcccctttccagaacattctgcctcgggtccacgtgaaagaggga
gagagactagatgccaagatgaagaggctggagtccaagtatgcccccctgcaccttgtc
cctctcatcgagaggctggggaccccacagcaaatcgccatcgcgcgggagggcgacctg
ctgaccaaggagcggctgtgctgtggcctgtccatgttcgaggtcatcctgacccgcatc
cgcaccttcctggacgaccccatctggcgcgggcccctgcccagcaatggcgtcatgcac
gtggacgagtgcgtggagttccaccggctctggagcgccatgcagttcgtctactgcatc
cccgtgggcacccacgagttcaccgtcgagcaatgcttcggggacggcttgcactgggcc
ggctgcatgatcattgtgctgctcggacagcagcggcgctttgccgtgctggatttctgc
taccacctgctcagagtccagaaacacgatggcaaggatgagatcatcaaaaacgtgcct
ttgaagaagatggtggaaaggatccgaaaattccagatcctgaacgacgaaattatcacc
atcttggacaagtacctgaaatcgggtgacggggagagcacaccggtggagcacgtacgc
tgtttccagccgcccatccaccagtccctggccagcagctga
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