Suncus etruscus (white-toothed pygmy shrew): 126021927
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Entry
126021927 CDS
T09902
Symbol
NEDD1
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126021927 (NEDD1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126021927 (NEDD1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
126021927 (NEDD1)
Microtubules and associated factors
gamma-tubulin ring complex
126021927 (NEDD1)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
126021927 (NEDD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
WD40_RFWD3
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
DSE1_N
CFAP251_N
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
eIF2A
PAC11
WD40_like
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
WD_LRWD1
KNTC1_N
Beta-prop_SPT8
Cytochrom_D1
NRBF2
ATG38_C
Motif
Other DBs
NCBI-GeneID:
126021927
NCBI-ProteinID:
XP_049638766
LinkDB
All DBs
Position
11:51569096..51622047
Genome browser
AA seq
663 aa
AA seq
DB search
MQEDLRFASSGDDIKIWDASSLTLLDKFNPHISPRGISSLCWSSNNNFLVTASSSGDKIV
VSNCKCKPVPFLELGEGQKQTCVSLNSTSMYLVSGGLNNTVNIWDLKSKRVHRSLKDHKD
EVTCVTYNWNDSYIASGSLSGEIILHSIITNLSTTPFGHGSNESVRHLKYSTFKKSLLGS
VSDNGIVTLWDTNSQSPYHNFDTAHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKK
LVKTLVADSPLTAVAFMPDGATLAIGSSRGKIYQYDLRILKSPVKTISAHKTSVQCIAFQ
YSTALSKSSLSKGGTNKATAVSKQTSNVCGGLQNSGISKDTALPSVATVLPQSMTTVVGK
GVVAVQDKAGLPQSLNTDILSKEIDTGKNQNFSSFDDTKNSSLGDMFSPIRDDAVVNKGT
DESIGKGDALDFLPQLNSVFPPRKGPVASSTSVLHSSPLNIFMGSPGKEEIETHDLTAES
KKTYPRKQESKDSFKQFAKLMSGVESGILNTSPISPISNQTRSYEKFEKAEKEIEAQVIY
EPTFNGSSAPVTKLTSSIAAGVASSLSGKIVDSIGNNLTNTPLTSIQIHFIQNMIQDTLD
DFREACHRDIVNLQVEMIKQFHMQLNEMHSLMERYSVNEGLVAEIERLREENKRLRAQLL
KFQ
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagacctcagatttgcttcatcaggagatgatattaaaatatgggatgcttca
tctttgacattgctggataaattcaatccccacatatcaccccgtggaattagctcactg
tgctggagcagcaataataactttcttgtgacagcatcttccagtggtgacaaaatagtg
gtttcaaattgcaagtgtaaacctgtcccttttttagagcttggtgaagggcaaaagcag
acatgtgtcagtttgaattctacttctatgtatttggtaagcggaggcctaaataacaca
gttaatatttgggacttaaagtcaaaacgagttcatcgatcacttaaggaccataaagat
gaagtaacatgtgtaacatataattggaatgatagctacattgcttctggatctctcagt
ggtgaaattattttgcacagtataatcacgaatttatctactactccttttggccatggt
agtaatgagtctgttcggcacttaaagtactccacatttaagaagtcactcttgggcagc
gtttctgataatggaatagtaactctctgggacacaaatagtcagagtccctaccataat
tttgatactgcacataaagctccagcatcaggcatctgtttctctcctgtcaatgagttg
ctgtttgtaactattggcttggataaaaggatcattctctatgatacttcaagtaagaaa
ctagtgaaaacactggtggctgactctccgctgacagcggtagccttcatgccagatgga
gctacattggctattggatcttcccgggggaagatatatcagtatgatttaagaatattg
aaatcaccagtcaaaaccatcagtgctcacaagacatctgtgcagtgtatagcatttcag
tactctactgctctctctaagtcaagtttaagtaaaggtggtacaaataaagccacagct
gtgagcaaacaaacttctaatgtctgtggtggacttcagaattctggaatcagcaaagac
acagccctcccttctgttgccacagttctacctcagtccatgacaacagttgtggggaag
ggagtggttgctgttcaagacaaagcagggttgcctcaaagcttaaatacagatattttg
tcgaaggaaatagacactggaaaaaatcagaatttctccagctttgatgatactaaaaac
agtagtttaggtgacatgttttcacctatcagagatgatgcagtagttaataagggaact
gatgagtccattggcaaaggagatgctcttgattttctgccacagttaaactcagtgttt
cctccgagaaaaggtccagtagcttcaagcacatcagtattgcattctagtcctcttaac
atctttatgggatctccggggaaagaagaaattgaaactcatgatctgacagctgaatct
aagaaaacatatcccagaaaacaggaatctaaagactcctttaaacagtttgcaaaattg
atgtctggtgtggagtctggaattctgaatacttctccaatatctccaatatctaaccaa
acaagaagttatgagaaatttgaaaaggcagagaaagaaatcgaagcccaagtaatatat
gaacccacatttaatggatcctcagctccagttacaaagttaacttcttctattgctgct
ggagttgccagttcactgtctggaaaaatagttgattccattggaaataatctgacaaat
acaccgttgacatctattcaaatccattttattcagaacatgatacaggatacattggat
gactttagagaagcttgccatcgggatattgtgaatttgcaagtggagatgattaaacag
tttcatatgcagttgaatgaaatgcactccttaatggaaagatactcggttaacgaaggt
ttggtggctgaaattgaaagactacgagaagaaaacaaaagactgcgggcccaacttttg
aaatttcagtga
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