Suncus etruscus (white-toothed pygmy shrew): 126021945
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Entry
126021945 CDS
T09902
Symbol
SLC24A1
Name
(RefSeq) sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
126021945 (SLC24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126021945 (SLC24A1)
Transporters [BR:
setr02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
126021945 (SLC24A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
126021945
NCBI-ProteinID:
XP_049638798
LinkDB
All DBs
Position
1:complement(6807006..6827310)
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AA seq
1109 aa
AA seq
DB search
MGKLIRMGTQERRIFGPKRLLWSRLFFFLGILLLGSLYQHMRSSQGLPSLWGAVSLPFPI
KLAGRDLPRKEVMVSSDPWRVNSGMESGTPVPLPTQDGAETRPGWTLGSTHRLPRRAARP
KDSSSPTRTDTESVRGTLGTTPGRGQMDPTSTASTMTGTKATLTPAWGEMSHHPTQIRAV
VRKNSPSLGTRHVVSHIPPMLMTMMRTQEVTPRSTVKGRETVVTYTALKTTPSNRGQEVT
TSSTQGVLAHTPTVLDSDIETNSLTAPSRAKGRDSGSSTVSQGLVGENYLSTPPGTVLAH
PPTTPQPSETSTKSDNRPIGAHTSTAAQRQGDSSSRTSALTFSTSSTTFWGLSKKLPQAP
STSASAPSRASIVTQDHGCVVLQPDPITLTVPFPNHIQPSPSGLPPSQPAHPPKGEYPPD
LFSVEERQQGWLILHIFGMMYVFVALAIVCDEYFVPALGVITDKLRISEDVAGATFMAAG
GSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCSLLSREILNLTWWPLFRDVS
FYILDLMMLILFFLDSLIAWWESLLLLLAYAVYVLTMKWNQQLECWVKEQLNKRPATKVT
ALGDLSKLPSVSMLTRESSSASLHSSTIRSTIFWLMLHSLDPLGEGKQGSAMLDPAAARV
QKEAETARPRAGAGEARQQGSVAGSQRVRRRKPRISQESRTDCPYYFGIFGCPLTSLTEG
CGWDTAVWTRALSFSFLAGPSKDKEHESLNHKAGKPPKAERKSEEEELAELPAVMASPDP
ALGTQGEEEEEEEEEDGGRQEGEMGAEDTGQSQEPDGGPSSLVDKDEVQPEDRHGEDAGG
DSEKQKFNEESHSGEAKNNEKCADGEGGGDGGDSDEDEEEGEEEDEEEEDEDEEEEEEVE
EEQDVPLSLEWPRSRQKQVLYLFLLPIVLPLWLTVPDVRRPESRKLFVLTFLGSISWIAM
FSYLLVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSN
IFDITVGLPVPWLLFSLIHGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKIL
GFTMFLLYFAFLIISVMLEDRVIACPVSV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctgattaggatggggacacaggagaggcggatattcgggccaaaacgactt
ctttggagtcgcttattcttctttctgggaatactgctccttggttctctctaccagcac
atgaggagttcccagggcctgccctccctgtggggggcagtctctttgccattccctata
aaactggctggtcgggacctccccaggaaggaggtgatggtgagcagtgatccttggaga
gtcaactctggaatggagagtgggactccagtgcctctccccacccaggatggggctgaa
acaagacctggctggacactgggaagtacccacaggctgcccagaagagcagcacgaccc
aaagatagctccagtcccactagaacagacactgaaagcgtgaggggaaccctcggcacc
acgcctgggagaggacagatggatcccacttcaaccgcatccacaatgacggggaccaag
gcaaccctaacaccggcttggggagaaatgagccaccatccaactcaaatccgggcagtg
gtgaggaagaacagcccatctctgggcactaggcatgtggtcagtcatattcctcccatg
ctcatgaccatgatgagaacccaggaggtcaccccaagatccacagtgaaaggcagggaa
acagtggtgacctacacagcactgaagaccactccttccaacagagggcaggaagtcact
acatcctcaacccaaggtgtcctggctcacaccccaacagtcctggacagcgacatagaa
acaaattccctgactgctcctagtagagcaaagggcagagacagtggcagctcaactgtc
tcccagggactagtaggggagaactacctctcaactccaccaggaactgtcttggcgcac
cccccaaccacccctcagccatcagagacctcaaccaagtcagacaataggcccatagga
gcccacacctctactgctgcccagcgacagggggactcctcctccagaaccagtgctctg
acttttagcacttcctcgactactttctgggggctgtcaaagaaacttccacaagcaccg
agcacctcagcaagtgcccccagtagggcaagcatagtcactcaggaccatggctgtgtg
gtgctgcagccagaccccatcacactcactgtccccttccccaaccacatccagcccagt
ccctcaggactgccccccagccagccagcccacccccctaaaggagagtaccctccggac
ttgttcagtgtggaggagcgacagcagggctggctgatcttgcacatcttcggcatgatg
tatgtgtttgtggccttggccatcgtgtgtgacgagtacttcgttcccgcactgggagtc
atcacggacaagctacggatatcggaggacgtggctggtgccacatttatggctgctggt
ggctcagcccctgagctctttacctccctcatcggtgtcttcatctctcacagcaacgtg
ggcattggcaccatagtgggctcggctgtgtttaatattctctttgttatcggcacctgc
tccctcttgtcccgggagatcctcaacctcacttggtggcccctgttccgggatgtctcc
ttctacatcctggacctgatgatgctcatcctcttcttcctggacagcctcattgcctgg
tgggagagcctgctgctgttgctggcctacgccgtctacgtgctcaccatgaagtggaac
cagcagctggagtgctgggtgaaggagcagctcaacaagaggccggccaccaaggtcacg
gcccttggagatctcagcaagctcccgtctgtgtccatgctgacccgtgagagcagttca
gcctctctgcatagcagcaccatccgcagcaccatcttctggctcatgctccacagcctg
gaccctctgggggaaggtaagcagggtagtgccatgttggatcccgctgctgccagggtg
cagaaagaagctgaaacagccaggccaagagctggtgcaggagaagcgaggcaacagggg
agtgtggcaggaagtcagcgggtgaggagacggaaacccagaatctcccaggaatccaga
acagactgtccatactactttggcatctttggctgcccactgaccagcctcactgaaggc
tgtggctgggacactgcagtttggacacgagctctttccttttcattcctagctggtccc
tccaaggacaaagagcatgagagcttgaatcacaaggctgggaagccccccaaagctgag
aggaaatcagaagaggaggagctggctgagctccctgcagtcatggcttcaccagaccca
gcgctgggcacccagggcgaggaggaggaggaggaggaggaggaggacggtggcaggcag
gaaggcgagatgggagctgaggacaccggccaaagccaagagccagatggagggccatcg
tccctggtggacaaggacgaagtgcagccagaggacaggcacggggaagatgctggaggt
gactctgaaaagcagaaattcaatgaggaaagtcacagtggcgaagccaaaaacaatgag
aaatgtgcagatggtgaaggaggaggagatggaggtgacagtgatgaagacgaagaagag
ggggaagaggaggacgaagaagaggaagatgaagatgaagaggaggaggaggaggtggag
gaggagcaggatgtgccgctgtccctggagtggcccaggagccggcagaagcaggtcttg
tatctcttcctcctgcccatcgtgctcccgctctggctgacggtgccagatgtgcggagg
ccggaatctaggaaactatttgtcctcaccttcttgggctctatctcatggattgccatg
ttctcgtacctcctggtgtggtgggcgcaccaggttggtgagacaatagggatttctgaa
gagattatggggttgacgattctagctgcaggaacctcgattccggacctcatcaccagt
gtgattgttgctcggaaaggcttgggagacatggctgtgtcaagctcggtgggcagtaac
atatttgatatcaccgtgggcttgcctgttccttggctacttttctctctgatccatggt
ttacagcctgtcccagtcagcagcaatggcctgttctgtgcaattgttttgctttttctc
atgctgctgtttgtgatctcttccattgcctcgtgcaaatggagaatgaataagatcctg
ggcttcacgatgttcctcctttatttcgcattcctgatcatcagcgtgatgttagaggat
cgagtcatagcctgtcctgtatctgtctga
DBGET
integrated database retrieval system
