Suncus etruscus (white-toothed pygmy shrew): 126021973
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Entry
126021973 CDS
T09902
Symbol
FGD6
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
126021973 (FGD6)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
126021973 (FGD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
FYVE_2
RHG20_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
126021973
NCBI-ProteinID:
XP_049638820
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All DBs
Position
11:complement(49760988..49895505)
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AA seq
1427 aa
AA seq
DB search
MTSAAEIKKPPLAPKPKFVVVKNKPTPPPIAPKPDVVVSCVPQSTKKTKPAIAPKPKVLK
SSSVRDIRQSPTRKITVNLEEHKEELSESTDKANCKNVGHQSNDCISPVCSYSAECIYKL
GDREHLCVKQLVLEPLEMWENLENSKTDESSSSIKTRSKCNSNGEKVKSQSGVVRKGGIL
EEKLKDVLTHQSSSLVSSQKHQSPDKLQMQDRCHPDKLRVELINLSPSLSSLDKVPDYNL
QIPQDEFQNLETCHKGNEKSNTCVHLPEQGVLGNGKRSTCSLADGVSKQSEVNDLGPLEL
HLEPCTPRFPTPKPRKTRAACLVRQKYVDLQNESLEEPEHFDNNPFDPSEESLKHHKSSF
LHQNALCKKEQVDEVKPESESVDSNCDRQNVVHSQKSSCPETPSLSEMRPPGNTESHLSS
DSKKGDDSSMLLEVDKGTNFKRCSVLSMSLPKQLKLSCNECLPTACNPGVSSPQIQKKSQ
IKDENSSKIVPKKPQRHSLPSSGVLKKAASEELVEKSSYPSNEEKTSEKNLERNHLRRLY
APGHGMSSSFDMPKRTSEKPVWKLPHPILPFLGNPESLKSMAISSDSVPSAALTKPRAKS
LSAVDLERCTKPSKDTPKKNSLKKLLNKKLSICFLKSDFQKLWSRNSQPGDATAGSFSGA
ERKGSERHWHSLLADVEKRSKPTKAHSADNYSMVSKKKRKMSRVQSSAANSPRAESLDDQ
LLSQESSSQESYRSVLSSCAPEYENIRHYEEIPEYENLPFIKSLEFEWQNSSSMEDADAN
VYEIEEPYEALVSQLHLGPRHPHFSSSGESQERQNDSDLGLGDLPSDEEDEEVLSSSDED
NASSDSSKVEPDGLGEKQGEDDTGMKSKVHNIAKEIMSSEKVFVDVLKLLHIDFRDAVAH
ASRQLGKPVIEDRILNQILYYLPQLYELNRDLLKELEERMLNWTEQQRIADIFMKKGPYL
KMYSTYIKEFDKNIALLDEQCKKNPGFAAVVREFEMSPRCANLALKHYLLKPVQRIPQYR
LLLTDYLKNLLEDSGDYRDTQGALAVVIEVANHANDTMKQGDNFQKLMQIQYSLNGHHEI
VQPGRIFLKEGTLMKLSRKDMQPRMFFLFNDALLYTTPVQSGMYKLNNMLSLAGMKVRKP
SQEAYQNELKIESVERSFILSASSASERDEWLEAISRAIEEYAKKRTTFGPSRSVEEAVT
ENQEEVSPLGSKAPIWIPDTRVTMCMICTSEFTLTWRRHHCRACGKIVCQACSSNKYGLN
YLKNQPARVCEHCFHELQKLDHQQSPKIGSPGNHRSPSSALSSVLQSIPSGRKQKKIPAA
LKEVSANTEDSSMSGYLYRAKGNKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFT
VTQVKEENAEPRVFQLLHKNMLFYVFKADDAHSAQKWIEAFQEGTVL
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgccgctgaaattaagaagccaccattggcccccaagcccaagtttgtggtg
gtaaaaaataaaccaacgccacctcctattgctcctaaacccgatgttgtggtttcttgt
gttccacagtccacaaagaaaaccaaaccagcaatagctccaaagcccaaagttctgaaa
agctcatcagttcgagacatcaggcaatcacccacaaggaaaatcactgtgaacctggaa
gaacataaagaggaattatctgaaagcaccgacaaggccaattgcaaaaatgtagggcat
cagagcaatgactgtatttcacccgtgtgttcctacagtgctgagtgtatttataaactt
ggagacagggagcatttgtgtgtaaaacaactagtcctagagccactggaaatgtgggag
aacttagaaaacagtaaaaccgatgagtcctcttcatcgataaaaactaggagtaaatgt
aactctaatggtgagaaggtcaagagccagagtggagtagttcggaagggaggcattcta
gaagagaagctgaaagatgtgttaacccatcaatcctcatctttggtttcctcacagaag
caccaatccccagacaaactccaaatgcaggacaggtgtcatcctgacaaactcagagtg
gaattgattaatttgtcaccttccctctccagcctggacaaagttcctgattataacctg
caaattcctcaggatgaattccaaaacttggaaacatgtcacaagggcaatgaaaaaagc
aatacttgtgttcacctgcctgaacaaggggttctgggaaatggcaagaggagcacttgt
tcattggctgatggagttagtaagcaatcagaagtcaatgaccttggtcccttagaactt
catttagaaccttgtacccccagatttccgactcccaagcctagaaaaacacgggctgct
tgtctagtacgccagaagtatgttgatctgcaaaatgaaagtctcgaagaaccagagcat
tttgataataacccttttgatccttctgaggagagtttgaaacaccacaaaagcagtttt
ctgcatcagaacgcactatgtaagaaggaacaagtggacgaagtgaaaccagaaagtgaa
agtgtggactccaattgtgacagacaaaacgtggtacattcacagaaatcttcgtgtcct
gaaacaccttctctttcggaaatgcgcccccctggaaatacagaatctcatttgagttct
gacagcaagaagggagatgattctagtatgttacttgaggtggataaagggaccaacttt
aaacggtgcagtgttttatctatgagtcttcctaagcaacttaaattaagttgcaatgaa
tgcttacctactgcctgtaatccaggagtgtctagccctcaaatacaaaagaaatctcaa
ataaaagatgaaaattcctcaaaaattgtacccaaaaaacctcaaagacacagtttgcct
tcttcaggggtgcttaaaaaggctgcttcagaggaacttgtagagaaaagttcttatccc
tcaaatgaagaaaaaacatcagagaaaaatctagaaagaaatcaccttcggcgtttgtat
gccccaggccatggtatgtcatcctcctttgacatgcctaaacgaacttcagaaaagcca
gtgtggaaattacctcatcctattttaccctttttagggaacccagaatccttaaagtct
atggctatctcctctgatagtgtgccttcagctgccttgaccaaacctcgagcaaaatcc
ttatctgcagtggacttagaaaggtgcactaagccaagcaaagacactccgaagaaaaac
tctttgaagaagttgctcaataagaaactgtccatctgcttcttgaagagcgatttccag
aaattgtggtccagaaacagccagcctggagatgcaactgcaggcagcttctcaggtgca
gagaggaaaggttctgagagacactggcatagtctgctagcagatgtagagaagagaagt
aaacccactaaagcccattctgctgataattatagcatggtatcaaagaagaagaggaaa
atgtctcgggtccagagcagtgcagccaacagccccagagcagagtctttggatgaccaa
ttgctttcccaggagtcctcatcccaggagtcttacaggagtgttttaagcagctgtgcc
cctgagtatgaaaatatccgtcattatgaggaaataccagagtacgaaaacttgcccttt
attaagtctctggagtttgagtggcagaattccagtagcatggaggatgctgatgcaaac
gtgtatgagatagaagagccatatgaagctttggtgagccagctgcaccttggacccaga
cacccacatttcagcagttctggtgaatcccaagagaggcagaatgattcggatcttggc
cttggtgaccttccttcagatgaggaagatgaggaagttctcagcagttctgatgaagac
aatgccagctccgactccagcaaagtggagcctgatgggctgggagagaaacagggtgaa
gatgatactggaatgaaaagtaaagttcataatattgcaaaggagatcatgagttcagag
aaagtgtttgtggatgtgttaaaacttctgcatattgatttccgggatgcagtagcccat
gcttctagacaacttggcaaacctgttattgaggaccggatcctaaatcaaatcctgtac
tacttgcctcagctctatgagctcaacagggatctcctgaaggaactggaggagagaatg
ttaaactggactgaacaacaaagaatcgcagacatttttatgaagaagggaccatatctg
aaaatgtattccacatacatcaaagaatttgataagaatatagcgctattggatgaacag
tgcaagaaaaatccaggctttgctgctgttgttagagaatttgagatgagcccccgctgt
gctaacctggccctcaagcactacctgcttaagccagttcagaggatcccccagtacaga
ctgctgctcacagactatttgaaaaatctcttagaagactctggagattacagggacact
caaggggcccttgctgttgttatagaggtcgccaaccacgccaatgacacaatgaagcaa
ggggacaactttcagaaactcatgcaaatccaatacagcttgaatggacatcatgaaata
gtgcagccggggcggatttttctcaaagaaggaactctgatgaagctctctcggaaagac
atgcagccccgaatgtttttcttgttcaacgatgctctattgtacacaacaccagtgcag
tcaggaatgtacaaacttaacaacatgctgtcattggctgggatgaaggtcagaaaaccc
agtcaagaagcatatcagaatgaactcaagattgaaagtgtggagcgatcctttatcctc
tctgccagttctgcctcagaaagagatgaatggctagaagcaatttccagggcaatagaa
gaatatgctaagaaaagaaccaccttcggtccttctcggagtgttgaggaggccgtcaca
gaaaatcaagaggaagtcagtcctcttggatcaaaggctcccatctggattcctgacacc
agagtgaccatgtgcatgatctgcactagtgaattcacgctgacgtggagaaggcaccac
tgccgggcctgcggaaagattgtatgtcaagcttgttcatcaaataagtatggcttaaat
tacctgaaaaatcaaccagcaagagtatgtgaacattgtttccatgagctacaaaaatta
gatcaccagcaatctcctaagataggatctcctggaaatcacagatcaccttcaagtgcc
ttatcctctgtcttgcaaagcattccatcagggaggaaacagaaaaaaatccctgctgct
ctcaaagaggtatcagcaaacacagaagattcttctatgagtggctatctgtacagagca
aagggcaacaaaaaaccatggaaacatttgtggtttgtcataaagaacaaagtcctgtat
acatatgctgcaagtgaggatgtggcagctctggagagtcagcctttgttagggttcacg
gtcactcaagtgaaagaagagaatgcagagcctcgagtattccagttactgcacaaaaac
atgctgttttatgtattcaaagcagacgatgctcactcagctcaaaagtggatagaagca
ttccaggaaggcacagtattgtag
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