Suncus etruscus (white-toothed pygmy shrew): 126022092
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Entry
126022092 CDS
T09902
Symbol
STAB2
Name
(RefSeq) LOW QUALITY PROTEIN: stabilin-2
KO
K19013
stabilin-2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126022092 (STAB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126022092 (STAB2)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Hyaluronan
Cell surface receptors
126022092 (STAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
EGF
FXa_inhibition
EGF_Teneurin
EGF_TEN
EGF_MSP1_1
cEGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
126022092
NCBI-ProteinID:
XP_049638905
LinkDB
All DBs
Position
11:60523934..60706793
Genome browser
AA seq
2632 aa
AA seq
DB search
MGLGIAKAGGRLSKAAQSRSLFLGVSQSTEIPDCGSASTLLSGYPVIQPYKVKSGRFHLK
PRFAIFLSLNKAISKYLNCSDRCLARRRNKYFLIILQMLILLFLGLVMQNFCTRTETTEQ
EKRCDKKSVLTIRTECQSCSYNFAINCPEGYTKITKGSSGVRDCRYWFTYEMKAYSLALP
GCRHICKKDYMQPQCCPGHWGPDCMECPGGAKSPCNGHGSCADGMEGNGICSCQDPFGGT
ACETCTSNNLYGPNCLSECNCVHGVCNSGPMGNGTCECYSAYTGPRCDQAIPACAALLCP
EHARCSPSSEDDTKLECKCLPNYKADGKVCKPINPCSQKVCSPHAKCTYLGPNRHNCTCL
EGYHGDGQVCLPVDPCQDNFGDCPPQSTVCKYDGPGQSHCECREHYHDFVPGVGCSLTDI
CKTKNPCHQHANCTTIAPGQTRCSCQKGYMGDGSKCYGNILQRLQELNIEPGGKWQGKLT
AFTSLLDKAYGWPLNNLGPFTVLLTTDKGLKGLNVKELSKDTQAVQYFVKLHIIAGQMSS
KQMNNTSIFYTLTGKAGEIFNGDKDNQLKLKLFGGKKIVKIIQGDIIASNGLLHILDKAM
DNLEPSFKSNTEQTIMKMLQPRYSKFRSLLEKTNMGQALEEDGAGEPYTIFVPRNEALSN
MKADKLDYLLSPEGSQKLLELVRYHIVPFTQLEVVSLISTPSIRSMANQMLQFNTSSTGR
ILANGVSMEEIEVAAKNGRIYTLNGILIPPSIVPILPHRCDETKNEMKLGTCLSCSLVRL
SKCPANSEPMDLFTQKCAYSGRTRNLKNGCARYCNATLTIPKCCPGFYGPDCKQCPGGFK
NPCSGNGKCADGIDGSGVCTCFEGFQGSHCQFCAHPHRYGPLCNKDCPCLYGKCDNRVNS
DGACQEDTCEVGFTGRFCHKQTSTCGPFVQFCHIHATCEYSNGTASCVCKAGYKGDGIIC
SEVDPCMELIPGGCSPNAECLRTGSGTHTCVCQQGWTGDGRDCSEINKCLMPDKGGCHHN
ATCLYVGPGQNECDCKKGFQGNGIDCEPITSCLEQTGMCHPLATCQLASSGLWRCVCREG
FEGDGLLCYGNAAVELLSLSEAAQFNQWINNASLQPLLSAASNLTILVPSQQAVEDMDQN
EKDFWLSKSNIPALIKYHMLLGTYGVTDLQALSSSDTLATSLQGNFLHLAKTDGNVTLDG
ASIIDGDNAATNGVIHIINKVLVPRGGLTGSLPNLLTRLEQMPNYSIFRGYMVQYNLAST
IEEADTYTVFAPNNDAIENYIQEKKVRTLEETILKYHVILKEKLLKNDLHNGMHRETMLG
FSYLIGFFLHDNQLYVNEAPINYTNIATDKGVIHGLTKVLEIQKNRCDINNTSIVRGECE
KCPSKHICPLGTKPLGVVSHKCIITFYFNGKRNLFIGCQPHCVKTIITKECCAGFFGPQC
QPCPGRDSVCSGNGICLDGVNSTGACMCGDGFNGTSCETCTEGKYGVHCDQVCPCIHGIC
NQGPLGDGSCDCDVGWRGVNCEQEITKDSCNGTCHTSANCLLSADGTASCQCAAGFQGNG
TACAAINACATSNGGCSAKAFCKRTTPGKRVCVCKAGYTGDGIVCLEINPCLENNGGCHQ
NAECTQTGPNQAVCNCLPKYTGDGRFCMLINSCLTNNGGCSQFATCNHTGLDEKTCTCKP
NYVGDGFTCRGNIYQELPKNPKTSQYFFQLVHHSVRELVELGPFTVFAPLSAAFDEEPRI
SNWSKQGLMAQVLRYHIIGCHQLSLETLKLTPNATSLQGDSLVISVSQDMVYINNKAKII
SSDIISTNGIIHIVDKLLTPQNFLITPNASGRIVQNLTTMANNYGYGKFSSLIKDLGLLD
LITDPMHTPVTLLWPNDRTLQALPREKQDFLFNPDNKDKLKEYLKFHVIRDAKVLAANLP
RADAWKTLQGSKLRVKCGVGGQLGELFLNDQTCRIVQRGISFDLGVLYGINCLLIDPTLG
GRCDSFTTFNVSGDCGSCRNTPSCPRWSKPKGVKRRCLYNLSFKRNLEGCQHVCTKVIQV
PRCCSGYFGRDCQACPGGPDTPCNNRGVCLDQYSSTGECKCNTGFNGTACELCWPGRFGP
DCQPCSCSSHGQCDEGILGSGQCLCEKGWTGRFCDTQEVLPPVCMPPCSAHATCKDNNTC
ECDLNYEGDGVTCTVVDFCSQDNGGCAKVATCSQKDTQVFCRCPKGYRGDGHSCKEIDNC
ADGLNGGCHEHATCTITGPGKHKCKCKPHYVGDGLDCEPEQLPVDRCLQDHGQCHMNANC
ADLHFQDTTVGVFHLRAPSGQYKLTFDKAKEACVEEAATLATYNQLSYAQKANYHVCSAG
WLENGRVAYPTAYASKNCGSGVVGIVDYGTRNNKSEMWDVYCFRMKEVNCTCKEGYVGDG
FSCSGNLLQVLMSLPSLTNFLKEVLAYSNSSSRGQAFLKHLANLSIQGTLFVPQNDGLRG
NETLSGRDIEHHLTNVKVFFYDDLVNGTTLRTQLGSQLHITYSQDQQQQDTLFVDGRAIL
QRDLVASNGIIHVISGPLKAPTVPMHAGHTGLGMGIFFAILLVIGAIALATYSYFRFKWR
TIGFQHFESEEDIDVSALGKQQDPKNITNPMYESVTSAPPEPSYDPFMDSDE
NT seq
7899 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgggcatagccaaagctggaggcagactgagcaaagcagcgcaaagcaggagt
ttattcttgggagtttcacaaagcactgaaattccagattgtggctccgcctcaaccctg
ttgtcaggatatcctgtaattcagccatataaagtgaagagtggtcgatttcacctcaaa
ccacgatttgccattttcctgtctctaaataaggcaatatctaaatatctaaattgttct
gacaggtgcctggcacgcagaaggaacaaatatttcctcatcatactccaaatgttaata
cttttatttcttggactggtgatgcagaatttctgcactcggacagaaacgacagaacag
gaaaaaagatgtgataagaagtctgtcttgacaattaggactgagtgccaatcctgctct
tacaactttgcaatcaattgccctgaaggttacaccaagattaccaaaggcagttctggg
gttagagactgcagatactggttcacatatgaaatgaaagcatactccttggccctccct
gggtgccgccacatctgcaaaaaggactacatgcagccacagtgctgccctgggcactgg
ggccccgactgcatggagtgcccaggaggagcaaagtctccctgcaatggccatggcagc
tgtgcagatggcatggaaggaaatggaatctgctcctgccaagacccatttggaggcact
gcctgtgaaacctgcactagcaacaacctctatggacccaactgtttatcagagtgcaac
tgcgtacacggcgtgtgtaacagcggaccgatgggcaatgggacctgcgagtgctactct
gcatacaccggcccccgctgtgaccaggccatccccgcctgtgctgccttgctctgccca
gaacatgccagatgctccccttccagtgaggatgacacgaagctggaatgcaaatgcctc
ccaaattacaaagccgatggcaaagtctgcaagcccatcaacccatgttcacagaaggtc
tgctccccacatgctaagtgcacctacctggggccaaatcgccacaactgtacctgccta
gagggctaccatggggatgggcaggtttgcctgccagtggacccctgccaagacaacttt
ggagactgccccccacagtccaccgtgtgcaaatatgatgggccaggacagtcccactgc
gagtgcagggagcactaccacgactttgtgcctggagtgggctgcagtttaactgacatc
tgcaaaaccaagaacccctgtcatcagcatgcaaactgcaccaccatcgcccctggccag
accagatgcagttgccagaaaggttatatgggcgatggctcaaagtgctatggaaacatc
ctccagcgcctccaagaactcaacattgaacctggaggaaaatggcagggcaagctgact
gctttcacatccctcttggacaaagcctatggttggccactcaataacctgggaccattt
acggtactgttgacaacagacaaaggattgaaaggcctcaatgtaaaagagctctcaaaa
gatactcaagctgttcagtactttgtgaaactacacatcattgctgggcaaatgagctct
aagcagatgaataacacaagcattttctacaccttgacgggaaaggcaggcgagatcttc
aatggcgataaggataaccaattgaagcttaaactgtttggaggaaaaaaaatagtaaaa
attatacagggggatataattgcttccaatgggctcttgcacatccttgacaaagccatg
gacaacctggagccctctttcaagagcaacactgagcaaactattatgaagatgctgcaa
ccaagatatagcaagttcagatctttgctagagaaaaccaacatggggcaagccttggag
gaagatggggctggtgaaccttataccatttttgttccaaggaatgaagcattgagtaac
atgaaagctgacaaactcgattaccttctttctccagagggatctcagaagcttctggaa
cttgtcagataccacattgtcccatttacacagcttgaggtggtctctctcatttccacc
ccttccatcaggagcatggccaaccagatgctacagttcaacacaagcagcacaggtagg
attctggcaaatggggtgtccatggaagaaattgaagtggcagccaaaaatggccggatt
tacaccctgaacggaatcctcatccctccctccattgtcccgattctgccccaccgctgc
gatgaaaccaagaacgaaatgaagctgggcacctgtctgagctgttccctggtgcgcttg
agcaaatgtcctgccaattctgaacccatggatctcttcacgcaaaaatgtgcctatagt
ggcaggaccagaaacctgaagaatggttgtgccagatactgtaatgccactctgacgata
cccaagtgctgcccaggcttctatggccctgactgtaaacagtgtcctggaggcttcaag
aatccatgttcaggaaatggaaagtgtgcagacggcatcgatgggagtggtgtgtgtacc
tgctttgagggctttcaaggttcccactgccagttttgcgcccacccccacagatatgga
cctctctgtaacaaagattgcccatgcctctatggcaagtgtgataacagagtcaacagc
gacggggcctgccaggaagacacatgtgaggtcggcttcacagggagattctgtcacaag
cagacctctacctgtgggccctttgtgcagttctgtcacatccatgccacctgcgagtac
agcaatgggacggcgagctgtgtttgcaaagcaggatacaaaggggatggaatcatctgt
tcagaagtggacccttgcatggaactaatcccaggaggctgtagccccaatgcagaatgc
cttcgaactggctcaggaacccacacttgtgtgtgccagcagggctggaccggggatggg
agagactgctcagagatcaacaagtgtcttatgccagacaagggtggttgccaccacaat
gccacctgtttgtatgttggcccaggacagaatgagtgcgattgtaagaaaggatttcaa
ggcaatggcattgactgtgaacctataacttcatgcttagaacaaactggaatgtgccat
cctctggcaacctgtcagctggcttcctctggcctctggaggtgtgtgtgtcgagagggc
tttgaaggagatggcctcctgtgctatggaaatgcagctgtggagttgttatcactctct
gaggcagctcaatttaaccaatggataaataatgcatctctacaacccttgctgtctgct
gcctccaacctcacaattctcgtgccttcccaacaagctgttgaggacatggatcaaaat
gagaaggacttttggttgtctaagagcaatattccagccctaataaagtaccatatgctc
ctgggaacatatggagtgaccgatctacaggctctgtcctcgtctgacacgctggcaacg
tccttgcagggcaatttcctccatctagcaaaaacagatgggaatgtcacgctggatggg
gcctccatcattgatggcgacaatgcagccaccaatggagtaattcacatcattaataag
gttctggttccccgaggaggccttactggctctttaccaaatctactcacaaggctggag
cagatgcccaactattccatcttccgaggctacatggtgcaatataatctggcaagtacc
attgaggaagctgatacttatacagtatttgcaccaaacaatgatgctattgagaattac
atccaggagaagaaggttagaactctagaagagaccatcctcaagtatcatgtgatcttg
aaggagaaacttctaaagaatgaccttcacaatggcatgcaccgggagaccatgctgggc
ttctcctacctcattggcttctttcttcatgataaccagctctatgtcaatgaggctcct
atcaactataccaatatagccactgacaagggagtgatccacggcttgacaaaagttctg
gaaattcagaagaatagatgtgatattaacaacacgtctattgtacgaggagagtgtgaa
aagtgtccctcaaagcacatctgccctctgggaacaaaaccactgggcgtcgtgagccac
aagtgtatcatcaccttttatttcaatggcaagcggaacctgttcatcgggtgccagccc
cactgtgtgaaaaccatcattaccaaagagtgctgtgccggtttcttcgggccccagtgc
cagccctgcccggggagggacagtgtctgttccgggaacggaatctgcctggatggtgtg
aatagcactggcgcgtgcatgtgcggagatggcttcaacggcacctcctgtgagacatgc
accgagggcaagtacggtgtccactgtgaccaagtgtgtccttgcatccacgggatatgc
aaccagggaccattgggggatggctcctgcgactgtgacgtgggctggcgtggtgtgaac
tgtgaacaggagatcacgaaggacagctgcaatggaacctgccacaccagtgctaactgt
cttctcagtgcagatggcacagcttcatgccagtgtgcagcagggttccagggcaacggg
acagcctgtgcagcaatcaatgcttgtgcgaccagcaatggtggctgctctgccaaggct
ttctgtaagagaaccacaccaggaaagcgggtgtgtgtgtgcaaggcaggctacacgggg
gatggcatcgtatgcctggagatcaacccgtgtctggagaataatggcggctgccaccag
aatgcagagtgcacacagacagggcccaaccaggctgtgtgtaactgtctgcccaagtat
accggggacggcaggttctgcatgctcatcaacagctgcctgactaataacggcggctgc
agtcagtttgccacctgcaaccacacggggttggatgagaagacctgcacttgcaagccc
aactatgtgggggatggattcacctgccgggggaatatctaccaggagctcccaaagaac
ccgaagacatcccaatacttcttccagttggtgcatcattccgtgcgagaactggtggaa
ttgggtcccttcactgtctttgcgcctttgtctgcagccttcgatgaagaacccaggatt
agcaactggagcaaacagggtctgatggctcaggttcttcggtaccatataatcggctgc
caccagctgtccctggaaaccttaaaactgaccccaaatgccacctccctccaaggagat
tccctagtcatctctgtgtctcaggacatggtgtatatcaataataaagcaaaaatcata
tccagtgacatcatcagcaccaatggaatcatccacattgtagacaagttgctgactccc
caaaacttcctcatcacccctaatgcttctggaaggattgtgcaaaaccttacaacaatg
gcaaacaactacggatatggcaaattcagcagcttaattaaggacttgggcctgctggat
ctgatcaccgatcccatgcacacccctgtcactctcctttggcccaatgatcgtaccctg
caagccctgccccgtgagaagcaggatttcctgttcaatccagacaacaaggacaagctg
aaggaatatctcaagttccacgtgatccgggatgccaaggttcttgccgcgaacctgccc
cgggcagatgcctggaagactcttcagggctcaaagctaagagtgaagtgtggagtgggt
ggccaactgggtgagctcttcctgaatgaccaaacctgcagaattgtacagcgagggatc
tcattcgacctcggagtgctctatggcatcaactgtctcctgatcgaccccaccctaggg
ggccgctgtgacagcttcaccaccttcaatgtctcgggagactgcgggagctgtcgcaac
actcccagctgcccacgatggagtaaaccaaagggggtgaagcgtcggtgtctgtacaac
ctctcgttcaagagaaacttggaaggctgccagcatgtgtgcaccaaagtgatccaggtc
cccaggtgctgcagcggctacttcgggagagattgtcaggcctgtcctggaggtccagat
accccatgcaacaacaggggtgtctgcctcgatcagtactcgtccaccggagagtgtaaa
tgcaacacaggcttcaacgggaccgcatgtgagctgtgctggccagggaggttcgggcca
gactgtcagccttgcagctgttccagccacggacagtgtgacgagggcatcctgggctct
gggcagtgcctctgtgagaagggctggactggccgcttctgtgacactcaggaagttctg
ccccccgtgtgcatgcctccatgctctgctcatgccacctgtaaggacaacaacacgtgc
gagtgtgacctgaactatgaaggggatggagtaacgtgcacagtggtggatttctgctct
caggacaatggtggctgtgccaaggttgccacatgctcccagaaggatacccaggtcttc
tgcagatgtcccaagggttacaggggggatggccacagctgcaaggagatcgacaactgt
gcagatggcctcaatggcggctgtcatgagcatgccacctgcacaataactggcccgggc
aagcacaagtgcaaatgcaaacctcactatgtgggtgatgggctggactgtgagccagag
cagctgccagtggatcgctgcctgcaggaccatgggcagtgccacatgaatgcaaactgt
gctgatctccactttcaggacaccacggtgggtgtgttccacctgcgtgcccccagcggc
cagtacaagttgaccttcgacaaagccaaggaggcttgtgtggaagaagctgctaccctg
gccacctacaaccagctctcctatgcccagaaggccaactaccatgtgtgctcagcaggc
tggctagaaaatgggcgggtggcctaccccacagcctatgcctctaagaactgcggctct
ggtgtggttgggatagtggactacggaacaagaaacaataagagtgagatgtgggatgtc
tactgcttccggatgaaagaagtgaactgcacctgcaaagagggctatgtgggcgatggc
ttctcgtgcagtgggaatctgctgcaggtcctgatgtctctcccctcgctcacaaacttc
ctgaaggaagtgctggcctattccaatagctcatccaggggccaggcctttctcaagcac
cttgccaacctgtccatccagggcaccctctttgtgccacagaatgatgggctcagggga
aatgagacgctgtcaggacgggacatagagcaccacctcaccaatgtcaaggtcttcttc
tacgatgacctggtcaacggcactacactgaggacccaacttggcagccagttgcatatc
acatacagccaggaccagcagcaacaggacactctgtttgtggatggaagagccattctg
cagagggacctcgttgcctccaatgggatcattcacgtcatttctggccccttaaaagca
cccacggttccaatgcatgcagggcacaccggcctgggcatgggcatattcttcgccatc
ctccttgtcatcggtgccattgccttagctacatattcttacttccggttcaaatggaga
accattggcttccaacactttgagtcagaagaggacattgatgtctcagctctgggcaag
cagcaggatcccaagaacatcaccaaccccatgtatgagagtgtgacctcggccccccca
gagccttcctatgacccctttatggactcagatgaatag
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integrated database retrieval system
